Geobacter benzoatilyticus: JZM60_14340
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Entry
JZM60_14340 CDS
T07995
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
gbz
Geobacter benzoatilyticus
Pathway
gbz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gbz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JZM60_14340 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gbz03400
]
JZM60_14340 (recC)
Enzymes [BR:
gbz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
JZM60_14340 (recC)
DNA repair and recombination proteins [BR:
gbz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JZM60_14340 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QSV45288
UniProt:
A0ABX7Q318
LinkDB
All DBs
Position
complement(3092476..3095658)
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AA seq
1060 aa
AA seq
DB search
MPLTLYSSNRMEHLVAQLGEVLRRPLADPLAPEVIVVQSKGMQRWLAMELAKVMGVWANG
DYPFPNAFVWDLFRKALPELPAASPFDPAVLSWRIMGLLPGFLDQPAFAPLAGYLAGGQR
ELKLYQLAGKIADTFDQYTIFRPDMIARWEKGGENHWQAVLWRELAGEGKGLHREAVRSE
FFRCLGRGEVDKTLLPERITVFGISYLPQFHLDVFRRIADATEVNLFIMGPCREYWADIL
PERIIARLSPEEREVRIEGNPLLASLGLLGKEFSDTLVELGAMSGADTDLYGDAPDTTIL
GMVQNDILRLEGSSGDQRPVDGADRSILITSCHSPMREVEVLHDTLLNLFASSDGLTPRD
ILVMTPDIETYAPYISAVFDGCRDPRLKIPYSIADRSIRREGGLAETFLAILDLPGRRFP
VTAVTEILASPPVHARFGLDAGDLELIRTWLEETRIRWGMDEEERRRAGFPPYREHSWRA
GLDRLLLGYAMPEEDCRMVEGILPFDAMEGEGPAVLGRFTGFVEGLHALVDELDRPRTLT
EWVRLCRRILDDFFAPGEEGAFDLAALNGILTELETVRDEAGFGGAVELPVIRAWLRGRL
DREVRGLGFMTGGVTFCAMLPMRSIPFAVIALLGMNDGAFPRQNRPPGFDLIARDRRRGD
RSLRDEDRYLFLEALLSARRHFIISYTGQSIRDNSALPPSVLVDEFLDYLGRRFTDGSPE
FPASLVTKHRLQPFSPAYFTGDGTLFSYSEENRRAVAQRLKGAVPVPSFMTAPLPEPPEE
LLTVSLAGLLSFFDNPARYFVRTRLGIRLDELPPPLDDREPFAVDSLDAYRLREEMLDLA
LAGREPRETFAVARARGILPPAHQGELLFRGLGDGVEELAAQIRALTGGRAPLEPLTLDL
SLGSYRITGTLGDIWPEALVRHKGAKCSGRDQVRLWIEHLLLNLLAREGYPAAAILVATD
TTLSFGPVEEPLGHLAALLDLYGQGLREPLRFFPRTAAAYAKKGELAAARTAWGGEFFPE
GDDPYYRLCFGAVDPLDGEFERIAKTVFGPLAEHKQGKGE
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgcccttgactttatactccagcaaccggatggagcacctcgtcgcccagctcggcgag
gttttgcggcgtcccctggccgaccccctggcgccggaggtgatcgtggtccagagcaag
gggatgcagcgctggctggccatggagctggcaaaggtgatgggcgtatgggccaacggt
gactatccgttccctaatgcctttgtctgggacctgttccggaaggcccttccggagctt
cccgccgcatctcccttcgacccggcggtgctgtcgtggcggatcatggggctgctcccc
ggtttcctggaccaaccggccttcgctcccctggcgggatacctggccggggggcagcgt
gaactgaagctctaccagcttgccggcaagattgccgataccttcgaccagtacaccatc
ttccgccccgacatgatcgcccgctgggaaaaggggggcgagaaccactggcaggccgtt
ctctggcgggaactggcgggggaggggaaggggctccaccgggaggcggtgcggagcgag
ttcttccggtgcctgggccggggagaggtggacaagaccttattgccggaacggatcacc
gtcttcggcatttcgtatctcccccagttccacctggacgtcttccggcgcatcgccgat
gccaccgaggtgaacctcttcatcatgggtccctgccgggagtattgggccgacatcctc
ccggagcggatcattgcccggctctctccggaggagcgggaggtgcggatcgaggggaac
ccgctcctggcctccctggggctcctggggaaggagttctcggacaccctcgtagagttg
ggggccatgtccggcgccgacaccgacctctacggcgacgcccccgacacgactatcctc
ggcatggtgcagaacgatatcctccgcctggaggggagcagcggcgaccagcgccccgtg
gacggggcggaccgttccatcctgattacctcctgccacagccccatgcgtgaggtggag
gtgctccacgacaccctcctgaacctctttgcatcgtcggacggcctcaccccccgcgac
atcctcgtcatgacgccggacatcgagacctacgccccctacatctccgccgtgttcgac
gggtgccgggacccgcggctgaagattccctactccattgccgaccggagcatccgaagg
gaaggggggctggcggaaaccttcctggcgatcctcgaccttcccggcaggcggttcccg
gtgaccgcggtcacggagatcctggcatccccgccggttcacgcccggttcggccttgac
gccggcgacctggaacttatccgcacctggctggaggagacccgcatccggtgggggatg
gacgaggaggagcggcgccgggccggattccccccctaccgggagcacagttggcgggcc
ggcctcgaccggctcctcctggggtacgccatgcccgaggaggattgccggatggtggag
ggaatcctccccttcgacgccatggaaggggaggggcctgcggttctcggccgcttcacc
ggtttcgtggagggactccatgccctggtggacgaactggaccggccacgcaccctgacg
gagtgggtgaggctctgccggcggattctcgatgacttcttcgctcccggagaggagggg
gccttcgacctggccgccctgaacggcatcctcaccgagcttgagacggtgcgggacgaa
gcggggttcgggggcgcggtggaactgccggtgatccgcgcctggctccgggggaggctc
gaccgggaggtgcgggggctcggcttcatgaccggtggggtcaccttctgcgccatgctc
cccatgcggagcatccccttcgcggtcatcgcgctcctggggatgaacgacggggccttc
ccacgccaaaaccgccccccaggcttcgacctcatcgcccgggaccggcggcggggggac
cgctccctgcgggacgaggaccgctacctcttcctggaggccctcctgtcggcccggcgg
catttcatcatcagctacacggggcagagcatccgggacaacagcgcgctccccccctcg
gtcctcgtggacgagtttctcgactatctggggcgccgcttcacggacggctccccggag
ttcccggcgtccctcgtgacgaaacaccggctacagcccttcagcccggcctacttcacc
ggcgacggcacgctcttcagctattcggaggagaaccgccgtgccgtggcccagcgcctg
aagggtgccgtgccggtgccgtccttcatgacggcacccctgccggagccaccggaggag
ctgctgacggtctccctcgccggccttctctcctttttcgataatccggcccggtatttc
gtgcggacccggctcggcatccggctcgatgagcttccgccccccctggacgaccgggag
ccctttgcggtggactcccttgacgcctaccggctcagggaagagatgctggacctggcc
ctggcggggcgggaaccgcgggaaacctttgccgtggcccgggcccgggggatactgccg
ccggcccaccagggggagcttctgttccggggccttggcgacggggtggaggaactggct
gcacaaatcagggcgctgaccgggggaagggcgccgctggagccccttacccttgacctg
tccctggggtcgtaccggatcaccggcacgttgggggatatctggcccgaggcgcttgtg
cgccacaagggggcaaaatgttcggggcgcgatcaggtacgtctctggatcgagcacctg
ctgctgaatcttcttgcccgggaggggtacccggctgccgccatcctcgttgccaccgac
accaccctgagtttcgggccggtggaggaacccctcggccacctcgcagcgctcctcgac
ctttatggccaggggctccgggagccgctccggttttttccccgcacggcggctgcctat
gcaaaaaagggagaacttgccgccgcccgcaccgcctggggaggggagttctttcccgag
ggggacgatccctattaccggctctgcttcggcgctgtcgatcccctggatggggaattc
gagcggatcgcaaagacggttttcggacccctggccgagcacaagcagggtaagggggag
tag
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