Geobacter benzoatilyticus: JZM60_15640
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Entry
JZM60_15640 CDS
T07995
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
gbz
Geobacter benzoatilyticus
Pathway
gbz03030
DNA replication
gbz03430
Mismatch repair
gbz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gbz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JZM60_15640 (holA)
03430 Mismatch repair
JZM60_15640 (holA)
03440 Homologous recombination
JZM60_15640 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gbz03032
]
JZM60_15640 (holA)
03400 DNA repair and recombination proteins [BR:
gbz03400
]
JZM60_15640 (holA)
Enzymes [BR:
gbz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JZM60_15640 (holA)
DNA replication proteins [BR:
gbz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JZM60_15640 (holA)
DNA repair and recombination proteins [BR:
gbz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JZM60_15640 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
HP_1247_M
FAM165
DNA_pol3_gamma3
LisH_UCP007778
CPSase_L_D3
Motif
Other DBs
NCBI-ProteinID:
QSV45528
UniProt:
A0ABX7Q3R9
LinkDB
All DBs
Position
complement(3369205..3370206)
Genome browser
AA seq
333 aa
AA seq
DB search
MKIDEFNKAVSRGDISPLYYFHGDEPYLMERAVKRLTDLVVPPDFRDFNLDVFYGNECKG
DEIASVAQTLPMFADRRMVIVKRSGDLSAAALEILAACAVDPPPTTCLVFVGEKVDQRKK
FFQELKKKGELVECKRPYENQLGAFIREEAKSLGKRIEPAAAEMLVYLVGSNLGELTTQL
EKVALYVGQREAITIGDVRGIVSDTKVESVFDLANAMGERDPAKALRSLATILRDGEAPL
MLLAMIARHFRQLWRVRDLMAQKVAQQDISRLAGINPYFLKGVMAQARNFGTHELKRVFE
SLYAADLELKGGGSRRPALIMERLVMDVCGISR
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgacgaattcaataaagcagtgtcacggggagatatttctcccctttactat
ttccatggtgatgaaccttaccttatggagcgggccgtaaagcggcttacagacctcgtt
gtcccccctgatttccgtgatttcaatctggacgttttttatggcaacgagtgcaaggga
gatgaaatcgcgtcggtggcccagactcttccgatgtttgccgatcgcaggatggtaatc
gtgaagcgttccggcgacctttccgctgccgccctggaaatacttgcagcctgcgccgtg
gacccgccgcccaccacgtgcctcgtcttcgtcggagagaaggttgatcagcggaagaaa
ttcttccaggaactgaaaaagaagggtgagctcgtggagtgcaagcgcccctacgagaac
cagctcggcgctttcatccgcgaagaggcaaaaagcctgggcaagcgcatcgagccggct
gcggccgaaatgctggtatatctggtgggaagcaatctgggcgaattaaccacacagttg
gaaaaggtggcactgtatgttggccagcgcgaagcaataaccattggcgatgtacggggt
atcgtttcagacacgaaggttgagagcgtttttgatcttgccaatgccatgggcgaacgc
gatccggcaaaggcattgcggagccttgccaccatcctgcgggatggcgaggcgccgctt
atgctccttgccatgattgccaggcacttccgtcagctttggcgggtaagggatttgatg
gcgcagaaggtcgcgcagcaggatatctcccgccttgcaggcattaacccctatttcctt
aaaggggttatggcgcaggcgcgtaatttcgggacccatgaactgaaacgggtgttcgaa
agcctgtacgcggctgacctggagctcaaggggggagggtcacggcggcctgcactcatc
atggagcggcttgtgatggatgtctgcggaatttcccggtaa
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