Geobacter benzoatilyticus: JZM60_15745
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Entry
JZM60_15745 CDS
T07995
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
gbz
Geobacter benzoatilyticus
Pathway
gbz03030
DNA replication
gbz03430
Mismatch repair
gbz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gbz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JZM60_15745 (holB)
03430 Mismatch repair
JZM60_15745 (holB)
03440 Homologous recombination
JZM60_15745 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gbz03032
]
JZM60_15745 (holB)
03400 DNA repair and recombination proteins [BR:
gbz03400
]
JZM60_15745 (holB)
Enzymes [BR:
gbz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JZM60_15745 (holB)
DNA replication proteins [BR:
gbz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JZM60_15745 (holB)
DNA repair and recombination proteins [BR:
gbz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JZM60_15745 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
QSV45548
UniProt:
A0ABX7Q389
LinkDB
All DBs
Position
3391993..3392949
Genome browser
AA seq
318 aa
AA seq
DB search
MPFSRVIGQATPVDVLRRALRSGKSAHAYLFEGIEGCGKGTTALAFVEATFCGRDDGCGT
CPSCRKMGKLQHPDLHMVEPDGAFIKIDQIRELQRELVLRPVEAPLKACIIRDADRLNPS
AGNALLKTLEEPPGNALMILLTTNLDGVLPTVRSRCQLLRFAPLSEEMIEEQLVAAGRDR
AGARLAASLAGGSLGKALGDEEADTIDRAALLKRLGAFSLSDTAPLFAAAEEMASNREQA
LKQLDVLTSLLRDILLIQGGSDDVINRDIFPLLENEAARLSRERNIERITNTMEARRALM
RNANPRLTLDVLLMRLAE
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
gtgccgttctcccgagtcatcggacaagcaacccccgtcgacgttttacggcgcgcactc
cgttccgggaagagcgcccacgcctacctgttcgaaggaatcgagggctgcggcaaggga
acaacggccctcgcctttgtggaggcaaccttttgcggccgggatgacggatgcggcacc
tgcccgtcctgccgcaagatggggaaactccagcaccccgacctccacatggtggagccc
gacggggcgttcataaaaatcgaccagattcgggagctccagcgggaactggtgctccgc
ccggttgaagctccgctcaaggcgtgcatcataagggatgccgaccggctgaacccgtca
gccggcaacgccctgctaaaaactttggaggagcctccgggcaacgccctgatgatcctg
ctcaccacgaacctcgacggcgtcctcccaacggttcgctcccgctgccagttgctgcgg
tttgcgccattgtccgaagaaatgatcgaagaacagctggtggcggcgggacgcgatcgg
gctggcgcccgcctagccgcatcccttgccggcgggagcctcgggaaagccctcggggac
gaagaagcggacaccatcgaccgggcggccctgctgaaacgcctcggcgccttctccctc
agcgacacggctccactcttcgccgcagctgaagagatggcctccaaccgggaacaggcc
ctgaagcaactggacgtgctcacatcgcttctgcgcgacattctcctgatacaaggggga
agcgatgacgtgatcaaccgcgacatcttcccgctcctggagaacgaagcggcgcgcctg
tcacgggaaagaaacatcgaacggatcacaaacaccatggaggcccgccgggccctcatg
cgcaacgccaacccgcggctcaccctcgacgtgctcctgatgcgtcttgcggaataa
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