Gallionella capsiferriformans: Galf_0121
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Entry
Galf_0121 CDS
T01295
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
gca
Gallionella capsiferriformans
Brite
KEGG Orthology (KO) [BR:
gca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gca03400
]
Galf_0121
Enzymes [BR:
gca01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Galf_0121
DNA repair and recombination proteins [BR:
gca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Galf_0121
Prokaryotic type
Galf_0121
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ADL54166
UniProt:
D9SIA9
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Position
149745..151166
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AA seq
473 aa
AA seq
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MQSYNRSICWFRRDLRLDDHAALYHALKNSRAVHCVFVFDTVILDALSDKHDRRVEFIWH
SLYELNALLQQHGSTLQILHGNPVELIPHLARELEVQAVFCNRDYEPLAVRRDAAVAASL
SDIDFHQYKDQVIFEQSEILTGGGTPYSVFTPYKNAWLKKLDDFYLRAYPVERYFSSLAK
SAPQAFPALALLGFLPGKLNVQALPTGASGAATLFENFVSRIDAYGEARNFPAVKGVSYL
SVHLRFGTISIRRVASFAYYSGGAGGQVWLSELIWRDFYQMQLHHHPQLGQGAAFKAQFN
DIRFPNEEGKFAAWCEARTGYPLIDAAMRQLNGSGYMHNRLRMVVASFLVKDLHIDWRWG
ERYFAQHLIDFDLAANNGGWQWAASTGCDAQPWFRIFNPVTQSEKFDGAGRFIRRYVPEL
AGCPDKWIHAPWLMPAAEQQRCGVLVGKTYPLPVVDHAVARITTLALFKAAVG
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagctataaccgttcgatttgctggtttcgacgcgacttacgtctggatgaccat
gcggccctgtatcacgcactgaaaaatagccgggctgtgcattgtgtgttcgtgttcgat
accgtgatactggatgcgttgtccgataaacacgatcgtcgcgtcgagtttatctggcat
agtctttacgaattgaatgcgctcttgcagcagcatggcagcaccttgcaaatcttgcat
ggcaatccggttgagctgatcccgcatctggcgcgcgaattggaagtgcaggcggtattt
tgtaatcgtgactatgaacctttggcggtgcggcgggatgcggcggtggcagcatcgcta
tctgacatcgacttccatcagtacaaggatcaggtgattttcgagcaatcggaaatttta
accggcggcggcacgccttacagcgtatttaccccctacaagaatgcgtggcttaaaaag
ttggatgatttttatctgcgcgcctatcctgtagaacggtatttttcatcgctggctaag
tcagccccacaagcttttccggcgctggcattgttaggatttttacccggaaaacttaat
gtgcaggctttaccaaccggtgcatcgggtgcggcaaccttatttgagaattttgtcagc
cgcatcgatgcctatggtgaagcgcgcaatttccctgctgtcaaaggcgtgtcgtattta
tccgtacatctgcgctttggcacgatttctatccgccgtgtggcgtcctttgcctattat
tcaggtggcgcgggtgggcaggtatggctgtcagaactgatctggcgagacttttaccag
atgcagttgcaccatcatccgcaactcgggcaaggcgccgccttcaaggcgcagttcaat
gacatccgttttccgaatgaggaggggaaattcgctgcctggtgcgaagcgcgtaccggt
tatccgctgattgatgcggcgatgcgccagctcaatggttccggctatatgcacaatcga
ctgcgtatggtggtggcctcttttttggtcaaggatctacatatcgattggcgttggggt
gagcgttatttcgcgcagcacctgatcgattttgatctggcggccaataacggcggctgg
caatgggcggcctccaccggttgtgacgcacaaccctggtttcgcatctttaatcccgtt
acgcagtcggaaaagttcgatggcgcagggcgctttattcgtcgctatgtgccggagctg
gcgggctgtcctgataagtggatccatgcgccgtggctgatgccggcggctgaacagcag
cgttgtggcgtgctggtcggcaaaacgtatccgctgcctgtcgttgatcatgctgttgcc
cgaatcacaacgcttgcgctgtttaaggcggctgtagggtga
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