Gallionella capsiferriformans: Galf_0140
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Entry
Galf_0140 CDS
T01295
Name
(GenBank) exodeoxyribonuclease III Xth
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
gca
Gallionella capsiferriformans
Pathway
gca03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Galf_0140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gca03400
]
Galf_0140
Enzymes [BR:
gca01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Galf_0140
DNA repair and recombination proteins [BR:
gca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Galf_0140
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ADL54185
UniProt:
D9SIC8
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All DBs
Position
169931..170698
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AA seq
255 aa
AA seq
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MKLATWNVNSLKVRLPQVLDWLAANPVDVLCLQETKQQDADFPDTELAAAGYHTVFAGQK
TYNGVAILSREAAIDVQIGIPGFEDEQKRVIAATFGDIRVVDVYIPNGQSPDSDKYQYKL
GWLAALHDWLKEELVRYPKLVLLGDYNIAPEDRDVHDPAAWVGNVLVSPPERDAFKSLLA
LGLTDSYRLFEQADKTFSWWDYRMMGFRRNLGMRIDHILISAPLVAQCKSCIIDKAPRKL
ERPSDHTPVVVELAS
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttgcgacgtggaatgtaaactcgttaaaagtgcgtctgccgcaggtactggac
tggctggccgccaatccggtcgacgtgctgtgtttgcaggaaactaagcagcaggatgcc
gattttcccgatactgagctggcggcggccggatatcacaccgtcttcgcggggcagaag
acttacaacggcgtggcgatcctgagccgcgaggccgcaattgatgtgcagatcggtatc
ccgggtttcgaggacgagcaaaagcgcgtgatcgcggccacctttggggacattcgcgtg
gtggatgtgtatattcctaacggacagagtcccgattccgacaaatatcagtacaaattg
ggctggctcgccgccctgcacgactggttaaaagaagagctggtacgctacccgaagctt
gtgctgctgggtgactacaatattgcaccggaagatcgtgatgtgcatgatccggccgcc
tgggtgggtaatgtgctggtaagcccgcctgaacgcgatgccttcaaatccttgctggca
ctgggtttgacggatagttaccgcttgttcgagcaggccgataaaacttttagctggtgg
gattaccgcatgatgggatttcgccgcaatctaggcatgcgcatcgatcacattctgatc
agcgcaccgctggtcgcgcaatgcaaaagctgcatcatcgacaaggcgccgcgcaaactc
gaacggccatcggatcacacgccggtggtggtggagctggcgagttaa
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