Gallionella capsiferriformans: Galf_0258
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Entry
Galf_0258 CDS
T01295
Name
(GenBank) Lytic transglycosylase catalytic
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
gca
Gallionella capsiferriformans
Brite
KEGG Orthology (KO) [BR:
gca00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gca01011
]
Galf_0258
Enzymes [BR:
gca01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Galf_0258
Peptidoglycan biosynthesis and degradation proteins [BR:
gca01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Galf_0258
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
Lysozyme_like
APAF-1-like_WHD
Motif
Other DBs
NCBI-ProteinID:
ADL54303
UniProt:
D9SJ27
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All DBs
Position
complement(308999..310495)
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AA seq
498 aa
AA seq
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MQRHKLIIRLFQISVFFALMLFGYTHLNKHIASWSDEELIVVIAQDSTLSDEEFSKQLAQ
QFADHLYVPLKIILVPADQISATLQKHQAHLSASGFRLDQKSSGLLLGPGFLTVREQVAF
NQDQDAPKHLNDLIGKRIAVVAGSTHEKALIALKEQLPQLAWESRTMQTVEDLLKEVAQR
SLDFTIANHEQISQMLNYYENLAVAFDIGKPSKLAWAFPHDADNELIAEAEQFFAEIEKN
GELHKLLDRYYGHNDRLATLDAAEFIEQTNKTLPKFRTLFEKAGRIVNEDWRLIAAIAYQ
ESHWDPLATSMTNVRGMMMLTEATADRMNVTNRLDARESINAGAKYLELIKKQLPPRIEE
PERTWLALSAYNQGQGHLEDARTLTARKGGNADSWVEVKKWLPQLNNPVYFEKLKHGYAR
GGEAVIFVENIRAYYDMLTRLTDDTTPARDYQLVSTREKPAFSLHTPRKLKATAGGDKTE
ASYSLSDQRSIDGQHPPL
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgacacaaacttataatccggctgtttcaaatcagcgttttttttgcactgatg
ctgttcggctatacccatcttaacaagcacatcgcctcctggagtgacgaggaactgatc
gtcgtcatcgctcaagactctacgctctccgatgaagaattttccaagcagcttgcccag
cagtttgctgaccatctctacgtcccgttaaaaatcatcttggttcctgccgatcaaatc
agtgccacactgcaaaagcatcaggcgcatttgtcggcttcgggcttcagactcgatcaa
aaaagcagcggactcttattaggccccggctttttaacggtacgcgagcaagtcgctttc
aatcaggatcaggatgcccctaaacacttgaacgatctgattggcaaacgcattgcggtt
gttgccggatcgacacacgaaaaggcactcatcgcactaaaggagcaattaccccaactc
gcctgggagtcgcgtacgatgcaaaccgtggaggatttgctaaaagaagtcgctcaaaga
tcgctggacttcaccatcgccaatcatgagcagatctctcaaatgctcaattactacgaa
aatctagccgttgccttcgatattgggaaaccgtccaaacttgcatgggccttccctcac
gatgcagacaacgaattgatcgccgaggccgaacagttcttcgctgaaatcgaaaaaaat
ggtgaactgcacaaactgctggatcgttactacggtcataacgaccgcctggccacgcta
gacgccgctgaatttatcgaacagacaaataaaacactgcctaaatttcgcaccctgttc
gagaaggccggccggattgttaacgaggactggcgactgatcgccgccatcgcctatcag
gaatcgcactgggatccgcttgccacctcaatgaccaacgtacgcggcatgatgatgcta
actgaggctaccgccgaccgcatgaacgtcaccaaccggctggacgcccgcgagagcatc
aatgctggcgcaaagtatctcgaactgatcaaaaagcaattacccccccgcatagaggaa
cctgaacgcacctggcttgcgctgtccgcctacaatcaaggccagggacacttagaagat
gcacgcacgctgacagcacgcaaaggcggcaatgcagattcctgggtggaagtaaaaaaa
tggctgccgcaacttaacaatccggtttatttcgaaaaacttaaacacggctatgccaga
ggcggagaagcggttatttttgtcgaaaacatccgcgcctattacgacatgctgacccgc
ctgactgacgacacaactcctgctcgcgactaccagcttgtcagcacacgtgaaaaaccc
gccttttccctgcacacaccacgcaaacttaaagcaacggcaggcggcgacaaaacagag
gcttcctattcactatccgatcagcgatccattgacggacaacacccacccttataa
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