Gallionella capsiferriformans: Galf_0584
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Entry
Galf_0584 CDS
T01295
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
gca
Gallionella capsiferriformans
Pathway
gca03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gca00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Galf_0584
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gca03021
]
Galf_0584
03400 DNA repair and recombination proteins [BR:
gca03400
]
Galf_0584
Enzymes [BR:
gca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Galf_0584
Transcription machinery [BR:
gca03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Galf_0584
DNA repair and recombination proteins [BR:
gca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Galf_0584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
DUF211
Motif
Other DBs
NCBI-ProteinID:
ADL54627
UniProt:
D9SCT8
LinkDB
All DBs
Position
621608..622576
Genome browser
AA seq
322 aa
AA seq
DB search
MYNNDFLKPRIIEVQKISETQAKVVMEPFERGFGHTLGNALRRILLSSMAGAAPTEVKMS
GVLHEYATIDGVQEDVVDILLNLKGVVLRLHGVKEVVLTLKKEGFGVVTAADISANAEVE
VLNPEHVIAHLTAGGKLDMQIKVEQGRGYVSAISRQLPNETRAVGHIALDASFSPVSRVS
YAVESARVEQRTDLDKLIMTIETNGAIDPEQAIRNAARILVDQFSVFAALEGTEPVVEKE
HVPQVDPILLRPVDDLELTPRSSNCLKAQSIHYIGDLIQYSENDLLRTPNLGRKSLNEIK
QVLAEHNLSLGMKLENWPVAVA
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgtataacaatgattttttgaagcctcgcattattgaagttcaaaagatttccgagacc
caggctaaagtggtcatggaaccttttgagcgtggctttggccacactttaggtaatgct
ctgcgtcgcattttgctgtcttctatggccggtgctgcaccgaccgaagtgaagatgtcc
ggtgtgttgcacgagtacgcaacgatagacggcgtgcaggaagacgttgttgatatcctg
ctgaatctcaaaggtgttgttctgcgtctgcatggcgttaaagaagtcgttctgaccttg
aaaaaggaaggtttcggcgtcgttactgctgcggatatcagtgcaaatgctgaagttgaa
gtgttgaatcctgaacacgtgattgctcatctgactgccggcggtaagctggatatgcag
attaaggttgagcagggccgtggttatgtttccgcaatctcacgtcagttgcctaatgaa
acgcgtgcggtagggcacatcgcgctggatgcttcattcagccctgtgagccgtgttagc
tatgcggttgagagtgcacgtgttgaacagcgtaccgacctcgacaagctgatcatgacg
atcgaaaccaacggtgcaattgatcctgaacaagcgatacgcaatgcagcgcgtattctt
gttgatcagttctctgtgttcgcggcattggaaggtactgagcctgttgttgaaaaggaa
catgttcctcaggttgatcctatcctgttgcgtccggtcgatgatctggagttgacacca
cgttcttcgaactgtctgaaggcacaaagcattcattacatcggcgatctgattcaatac
agcgaaaacgatctgttgcgcaccccgaatctgggccgcaagtctctgaatgagatcaag
caggttcttgccgagcacaatttgtcgctgggtatgaagctggaaaactggcccgtcgct
gttgcatag
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