Gallionella capsiferriformans: Galf_0904
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Entry
Galf_0904 CDS
T01295
Name
(GenBank) Glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
gca
Gallionella capsiferriformans
Pathway
gca00260
Glycine, serine and threonine metabolism
gca00630
Glyoxylate and dicarboxylate metabolism
gca00670
One carbon pool by folate
gca00680
Methane metabolism
gca01100
Metabolic pathways
gca01110
Biosynthesis of secondary metabolites
gca01120
Microbial metabolism in diverse environments
gca01200
Carbon metabolism
gca01230
Biosynthesis of amino acids
gca01240
Biosynthesis of cofactors
gca04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
gca00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Galf_0904
09102 Energy metabolism
00680 Methane metabolism
Galf_0904
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Galf_0904
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Galf_0904
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Galf_0904
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Galf_0904
Enzymes [BR:
gca01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Galf_0904
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Paralog
Gene cluster
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
OKR_DC_1
Met_gamma_lyase
Motif
Other DBs
NCBI-ProteinID:
ADL54936
UniProt:
D9SEG0
LinkDB
All DBs
Position
complement(954471..955718)
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AA seq
415 aa
AA seq
DB search
MFERNRYTVDQIDPEIFAAIEKENQRQEDHIELIASENYTSPAVMAVQGSQLTNKYAEGY
PGKRYYGGCEYVDIVEQIAIDRVKQLFGAEAANVQPNSGSQANQGVFFAVLKPGDTIMGM
SLAEGGHLTHGMALNLSGKWFNVVSYGLNAQEDIDYEALERLALEKRPKLIIAGASAFAL
RIDFERIARIAKSIGAYFMVDMAHYAGLIAAGVYPNPVPHADFVTTTTHKSLRGPRGGVI
LMKSEYEKAINSAIFPGLQGGPLMHVIAGKAVAFKEAQAPEFTAYQQQVVRNAAVLAETL
IARGLRIVSGRTESHVMLVDLRAKKITGKEAEKILGEAHITVNKNAIPNDPEKPFVTSGI
RLGSPAMTTRGFREEEARQVGNLIADILDNPLEADNITRVREQVAALTKRFPVYG
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaacgtaatcgctatacggtagaccagatcgaccccgagatatttgccgccatc
gagaaagaaaatcagcgtcaggaagatcacatcgagttgatcgcttcggagaactacacc
tcgcctgccgtgatggccgttcagggttcgcaactgaccaacaaatatgccgagggctac
cccggcaagcgttactatggcggctgcgaatatgtcgatatcgtcgagcagatcgccatt
gatcgcgtcaagcaactgttcggcgcagaggccgccaacgtgcaacccaactccggctcc
caagccaatcaaggggtgttcttcgccgtgctcaaaccgggcgacaccatcatgggcatg
agcttggccgagggtgggcacctgacccacggcatggcgctcaacctgagcggcaagtgg
ttcaacgtggtcagctacggtctcaacgcccaggaagacatcgactacgaagccctcgaa
agactggctctcgaaaaacggcctaagctgatcattgccggggcctccgctttcgcattg
cgcatcgatttcgagcgcatcgcccgcatcgccaaatccatcggtgcctatttcatggtg
gacatggcccactacgccgggctgatcgccgctggcgtctatcctaaccccgtgccacat
gccgatttcgtgaccaccaccacccacaagagcttgcgtggcccgcgtggtggggtaatt
ctgatgaaatctgaatacgaaaaagcgatcaattcggcgatcttccccgggttgcagggt
ggtccactgatgcatgtaatcgccggcaaggccgtggccttcaaggaagcacaggctccc
gagtttacggcctaccagcagcaggtcgtcaggaacgccgccgtgctggccgaaacattg
atcgcgcgtggtctgcgcatcgtctcgggccgcaccgagagccatgtcatgctcgtggat
ctgcgtgccaagaagatcaccggcaaggaggccgagaaaatcctcggcgaagcgcacatc
accgtcaacaagaacgccattcccaatgatcctgagaagcccttcgtcacgtcgggcatc
cgacttggttcaccggccatgaccacgcgcggtttccgcgaagaggaagcacgccaagtc
ggcaatctgatcgccgacatactggataatccacttgaagcggacaatataacccgtgta
cgcgagcaggtggccgcgttgacaaaacgctttcctgtctacggctga
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