Gallionella capsiferriformans: Galf_1147
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Entry
Galf_1147 CDS
T01295
Name
(GenBank) integration host factor, beta subunit
KO
K05788
integration host factor subunit beta
Organism
gca
Gallionella capsiferriformans
Brite
KEGG Orthology (KO) [BR:
gca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gca03032
]
Galf_1147
03036 Chromosome and associated proteins [BR:
gca03036
]
Galf_1147
03400 DNA repair and recombination proteins [BR:
gca03400
]
Galf_1147
DNA replication proteins [BR:
gca03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Galf_1147
Chromosome and associated proteins [BR:
gca03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Galf_1147
DNA repair and recombination proteins [BR:
gca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Galf_1147
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
TetR_C_30
S1-like
Motif
Other DBs
NCBI-ProteinID:
ADL55175
UniProt:
D9SF78
LinkDB
All DBs
Position
1230556..1230837
Genome browser
AA seq
93 aa
AA seq
DB search
MTRSDLIARLAELHPQLLAKDAEMAVKVILDALSSTLSRGGRVEIRGFGSFGLNYRPPRQ
GRNPKTGDKVGVPAKYVPHFKAGKDLRERVGKA
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgactcgttctgatttgatcgcaaggcttgccgaactgcatccgcagctgttagccaag
gatgccgagatggccgttaaagtgatactcgatgcactgtcctctacgctgtcgcgtggc
gggcgtgttgagattcgcggcttcggcagcttcggtctgaactaccggccgccgcgtcag
gggagaaatcccaagacaggcgataaggtaggggtgccggctaagtatgtgccgcacttt
aaggcaggtaaggatcttagagagcgtgtaggcaaagcctga
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