Gallionella capsiferriformans: Galf_1176
Help
Entry
Galf_1176 CDS
T01295
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
gca
Gallionella capsiferriformans
Pathway
gca03030
DNA replication
gca03430
Mismatch repair
gca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Galf_1176
03430 Mismatch repair
Galf_1176
03440 Homologous recombination
Galf_1176
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gca03032
]
Galf_1176
03400 DNA repair and recombination proteins [BR:
gca03400
]
Galf_1176
Enzymes [BR:
gca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Galf_1176
DNA replication proteins [BR:
gca03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Galf_1176
DNA repair and recombination proteins [BR:
gca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Galf_1176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
AAA_22
RuvB_N
AAA_14
AAA_30
AAA_16
AAA_5
ResIII
AAA_18
AAA_19
PIF1
TniB
TsaE
RCF1-5-like_lid
AAA_7
Herpes_Helicase
nSTAND3
AAA_24
AAA_assoc_2
Mg_chelatase
Rad17
Glyco_tranf_2_5
Motif
Other DBs
NCBI-ProteinID:
ADL55204
UniProt:
D9SFA7
LinkDB
All DBs
Position
1270229..1271944
Genome browser
AA seq
571 aa
AA seq
DB search
MSDTSVLARKWRPKNFAQLAGQEHVVRALGNALSQNRLHHAYLFTGTRGVGKTTIARIFA
KSLNCLTGITATPCGVCSACTEIDSGRFVDLIELDAASNTQVDNMRELLESALYAPTSAR
FKVYIIDEVHMLSKSAFNAMLKTLEEPPAHVKFILATTDPQKIPVTVLSRCLQFNLKQLP
PALIVAHLQHVLTEEHIEFEPAALNLVARAAQGSMRDALSLTDQAIAFSSGKLEESAMRS
MLGAIDQGYLFELLHALHRQNGADLLGVAESMATRSIAFDAALQELASLLHRIALAQTVP
QAIAEDDPERGRVLELAANFTPEEVQLFYQIAIHGRAEIELAPDEYAGFSMTLLRMLAFA
PSRVALPVKGFTQAAVQTAPVVQAAQPVQVVQAAQPVQPRAAHVAAPVATPPAPVVPAAV
AVPVVDAQIAVPVSTVAPVRHADDAPPDWNYLLGRLNVQAMAQQLAKHCVLDSVSEQQVV
LRLAQEHKHLQTKMATDNLQTALSDYFARPLKLSVVLGKVEAATPAKIEHQTRETRQQQA
LDSVASDAFVSGAVTELGATVVPESIKYVNQ
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
ttgtccgatacctctgtcctagcccgtaaatggcgccctaaaaatttcgcgcaactggca
ggccaggagcacgtcgtcagggcgctgggcaacgcgttgtcgcaaaatcgcctgcatcac
gcctatctgttcacgggtacgcgcggggtggggaaaaccacgattgcgcgtatttttgcc
aaatccctcaattgtctgaccggcatcacggcgacgccgtgcggcgtgtgcagtgcctgc
acggaaatcgacagcgggcgctttgtcgatctgattgagcttgatgcggcgtccaatacg
caggtcgacaacatgcgcgagttgctggagagcgcgttgtatgcgccgacctcggcgcgc
ttcaaggtgtatatcatcgacgaagtgcacatgctgtcgaaatctgccttcaatgcgatg
ttgaaaacgctcgaagagccgcccgcgcatgtgaaattcatactggcgacgaccgatccg
cagaaaattccggtcaccgtgctgtcgcgctgtctgcagttcaacttgaagcagttgccg
cccgcactgatcgtcgcgcatttgcagcacgtgctgacggaggaacacattgaatttgag
ccggctgcgctgaatctggtggcgcgcgcagcgcaagggagtatgcgcgatgcgttgagt
ctgaccgatcaggcgattgctttttcctccggtaagctcgaagaatccgcgatgcgcagc
atgctgggcgcgatcgatcagggatatcttttcgaattgctgcatgcactgcaccggcaa
aatggtgccgacttgctcggcgttgccgaatcgatggcgactcgcagcattgcgttcgat
gccgccttgcaggaactggcctcgttgctgcaccgcatcgcgctggcgcagaccgtgccg
caggcgattgcagaggacgaccccgagcggggccgggtgcttgaacttgccgcgaatttt
acgcccgaagaagtgcagctgttttatcaaattgcaatacacgggcgcgccgaaatcgaa
ctggctccggatgaatatgccggattcagcatgacgctgttgcgcatgctggcgtttgca
ccttcgcgtgtagcgctgcccgtaaaaggctttacgcaagctgccgttcagaccgctcca
gtggttcaagcagcccaacccgttcaggtggttcaagcagcccaacccgttcagcctcgt
gcggctcatgttgcagcgcctgtcgcaacgcccccggcgccagtcgtgccggccgctgtc
gccgtgcctgtggtggatgcacagattgccgtacccgtttcaactgtggcacccgtccgg
catgcggatgatgcgccgcccgactggaattatttgctgggcaggttgaatgtgcaggcg
atggcgcagcagttggccaagcactgcgtgctggattcggtgtccgagcagcaggttgtg
ttgcggctggcgcaggagcataaacatctgcagaccaagatggcgacggataatttgcaa
acggcgttaagcgattattttgcgcgccctttaaaactatccgttgtgttgggaaaagtg
gaagcggcgacgccggccaagatcgagcatcaaacgcgtgagacgaggcagcagcaggcg
ctcgactcggtcgcctcggatgccttcgtttcaggtgcggtcactgagctgggtgccacg
gtggtacccgaatcaatcaaatatgttaatcaatag
DBGET
integrated database retrieval system
