Gallionella capsiferriformans: Galf_1263
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Entry
Galf_1263 CDS
T01295
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gca
Gallionella capsiferriformans
Brite
KEGG Orthology (KO) [BR:
gca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gca03016
]
Galf_1263
Enzymes [BR:
gca01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Galf_1263
Transfer RNA biogenesis [BR:
gca03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Galf_1263
Prokaryotic type
Galf_1263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ADL55291
UniProt:
D9SFJ4
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All DBs
Position
1367524..1368483
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AA seq
319 aa
AA seq
DB search
MTTTRKPQFRNKWRAIDGVLLFDKPLELSSNDALQKIRRLFQAEKAGHTGTLDPLATGLL
PVCFGEATKYSNCLLDADKSYTALLRLGQTTTTGDAEGEILAERPVCFTDAELAAVLEQF
RGPINQLPPMHSALKHQGRPLYEYIREGITIERAVREVIIHELVVNRRHDLEMEISVRCS
KGTYVRTLAEDIGEALGCGAHLIGLRRTAIAHFKLGNGYTLAQLSEMSEAERDACVLPLV
SLMPDMPQLVLDDVQIRRMAQGQRLGLDCDLADGNVSLYGTGGFVGVGIKQGRRIAPLRL
ISGVAKLAARTELTEVVEQ
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
ttgacgacaacacgtaagccgcaatttcggaataaatggcgtgccatcgatggcgttttg
ctgttcgataagccgctggagttgagttccaacgatgcgttgcagaagatacgccgtttg
tttcaggccgaaaaggcggggcacaccggtacgctcgatcccttagcgacagggctgttg
ccggtttgcttcggtgaggcgactaagtattcgaactgtttgctggacgcggataagtct
tatacggcgctgttgcgtctcgggcagacgacgacgacgggggatgcggaaggtgaaatt
ctcgccgagcgtccggtgtgctttactgatgcggagcttgccgctgtcttggaacagttt
cgcggccccattaatcagttgccgccgatgcacagtgcgttgaagcatcagggacgtccg
ctctacgaatatattcgcgaagggattaccatagaacgcgcggtgcgggaggtgatcatt
catgaactggtcgtgaatcgcagacatgatttggagatggaaatttccgttcgttgcagc
aaggggacttacgttcgcacgctggccgaggatattggtgaggcgctggggtgtggcgca
cacctgatcggcttgcggcgtacagcgattgcgcattttaagctcggtaacggctatacg
ctggcgcagttgagtgaaatgagcgaggctgagcgcgatgcttgtgtgttgccgctggta
tccttgatgccggatatgccgcagctggttttggatgatgtgcagatcaggcggatggct
caaggacaacgtttggggctggactgtgatcttgccgatggcaatgtcagtctgtacggg
acgggtggatttgtaggggttggcatcaaacaaggacgtcgtatcgcacccttgcgtttg
atttccggcgtggctaaattggctgcgcgcacggaattgacggaagtggttgagcagtaa
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