Gallionella capsiferriformans: Galf_1472
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Entry
Galf_1472 CDS
T01295
Name
(GenBank) integration host factor, beta subunit
KO
K05788
integration host factor subunit beta
Organism
gca
Gallionella capsiferriformans
Brite
KEGG Orthology (KO) [BR:
gca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gca03032
]
Galf_1472
03036 Chromosome and associated proteins [BR:
gca03036
]
Galf_1472
03400 DNA repair and recombination proteins [BR:
gca03400
]
Galf_1472
DNA replication proteins [BR:
gca03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Galf_1472
Chromosome and associated proteins [BR:
gca03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Galf_1472
DNA repair and recombination proteins [BR:
gca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Galf_1472
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
TetR_C_30
Motif
Other DBs
NCBI-ProteinID:
ADL55491
UniProt:
D9SG44
LinkDB
All DBs
Position
complement(1613518..1613811)
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AA seq
97 aa
AA seq
DB search
MTRSELIAQLAAKFPQLTNSDIDMAVRTILDEMSRTLARGNRIEIRGFGSFGLNHRPPRK
GRNPKSGVNVMVPAKYVPHFKTGKELRERVDATAGSV
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atgacccgatcagaactcatcgcgcagctcgctgcaaaatttccacagctcaccaacagc
gatatcgatatggcggtgcgtaccattctggatgagatgtcacgcacactcgcgcgggga
aatcgcatcgaaatacgcggttttggcagtttcggtctcaatcaccgcccaccgcgcaaa
ggtcgcaacccaaagtcaggtgtgaacgtgatggtgcccgccaaatatgtgccgcacttc
aaaacaggtaaggaactccgtgagcgcgttgatgccactgcgggctcagtgtag
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