Gallionella capsiferriformans: Galf_1849
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Entry
Galf_1849 CDS
T01295
Name
(GenBank) RNA methyltransferase, TrmA family
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
gca
Gallionella capsiferriformans
Brite
KEGG Orthology (KO) [BR:
gca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gca03009
]
Galf_1849
Enzymes [BR:
gca01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Galf_1849
Ribosome biogenesis [BR:
gca03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Galf_1849
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
Methyltransf_23
TRAM
Methyltransf_ANTKMT
TRM5-TYW2_MTfase
Methyltransf_11
Methyltransf_12
MTS
PabTrmU54_TRAM_dom
Methyltransf_15
Methyltransf_32
RrnaAD
Cons_hypoth95
Methyltr_RsmB-F
Motif
Other DBs
NCBI-ProteinID:
ADL55859
UniProt:
D9SH62
LinkDB
All DBs
Position
complement(2017442..2018749)
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AA seq
435 aa
AA seq
DB search
MTTDNRVTIESLDQEGRGIAHAEGKVIFIEGALTGEVVSYASYRKKPSFELAQMTTLHRA
ASIRVEPKCKHYGMCGGCSMQHLDSRVQVAVKQRILEDSLARIGKVKPESILPAIYGQAW
GYRERARISAKYVIKKEKMLVGFHEKRSSFVADMQSCEILEPKVASLIEPLATLLAGLSI
RDKLPQIEVAVGEHVYVLVLRIMAPLSCEDEAALRAFADQHVVQFWLQTKGPETVVPFYP
LDAPELTYSLPEFGVVMPFAPGEFTQVNSQLNRVMISRAMRLLNPQKGERIVDFFCGLGN
FTLPIARSGAQVTGIEGSDALVKRAAQNAASNHLSVNTAFSARNLFEMDEAALAALGRFD
KWLIDPPRDGAMELVKSITPEIAPDLIVYVSCNPATLARDAAELVLRGYVLKSAGVMNMF
PQTSHVESIAVFVRS
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgacgactgacaacagagtaaccattgaatcgctggaccaggaaggtcgcggcatcgcc
catgcggagggtaaggtaattttcatcgagggcgcgttaaccggggaagtcgtgagttat
gcgtcttaccgcaaaaaaccctcgtttgaactggcgcagatgacgacgttgcatcgcgca
gcctctattcgggtcgagcctaaatgcaagcattacggcatgtgcggcggatgctcgatg
cagcatctggactcgcgcgtacaggttgcggtgaaacagcgtattttggaagacagtctg
gcgcggatcggaaaagttaagcctgaatccatcttgcctgcgatttatgggcaggcgtgg
ggatatcgtgaacgtgcgcgtatctcggccaaatatgtgatcaaaaaagagaaaatgctg
gtgggttttcatgagaaacgcagcagttttgtcgccgacatgcaaagttgcgagattctg
gagccgaaagtcgcctccttgattgagcctctggccactctgctcgcgggtctgtcgata
cgcgataaactgccgcaaatcgaggtcgcggtaggcgagcacgtgtatgtgctggtgctg
cgcatcatggcgccgctctcctgtgaggacgaagccgccttgcgcgcatttgccgatcag
catgtcgtgcagttctggctgcaaaccaaggggcctgaaacggtcgtgcccttttatccg
ctggatgcccctgaactgacttatagtctgcctgagttcggcgttgtgatgccatttgcg
ccgggcgagtttacccaagttaacagtcagctcaatcgcgtgatgatcagccgggcgatg
cgtctgctcaatcctcaaaaaggagagcgcatcgtcgatttcttctgcgggctcgggaat
tttaccctgccgattgcacgcagcggtgcgcaagtgacgggcatcgaaggcagcgatgcg
ctggttaaacgcgccgcgcagaatgcggcctctaatcatttatcagtgaacacggcgttt
agtgcacgcaatttgtttgaaatggatgaagcggcgctggccgcccttggccgcttcgat
aaatggttgattgatccgccgcgcgatggcgcaatggaactggtcaaatcgattacgccc
gaaatcgcgcctgatctgatcgtctatgtcagctgtaatccggcgacccttgcgcgggat
gcggctgaactggtactgcgcggttatgtgttgaaatcagcgggtgtgatgaatatgttc
ccgcaaacgtctcatgtcgaatcgatcgccgtatttgtcagatcatag
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