Gallionella capsiferriformans: Galf_1863
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Entry
Galf_1863 CDS
T01295
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
gca
Gallionella capsiferriformans
Pathway
gca00061
Fatty acid biosynthesis
gca00071
Fatty acid degradation
gca01100
Metabolic pathways
gca01212
Fatty acid metabolism
gca02024
Quorum sensing
gca04146
Peroxisome
Module
gca_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
gca00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Galf_1863
00071 Fatty acid degradation
Galf_1863
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Galf_1863
09145 Cellular community - prokaryotes
02024 Quorum sensing
Galf_1863
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
gca01004
]
Galf_1863
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gca04147
]
Galf_1863
Enzymes [BR:
gca01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Galf_1863
Lipid biosynthesis proteins [BR:
gca01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Galf_1863
Exosome [BR:
gca04147
]
Exosomal proteins
Exosomal proteins of breast milk
Galf_1863
Exosomal proteins of breast cancer cells
Galf_1863
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ADL55873
UniProt:
D9SH76
LinkDB
All DBs
Position
complement(2028337..2030124)
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AA seq
595 aa
AA seq
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MLEIISPAEAGSLHGLFLERVRRTPDKIAYRYFGNNAWQELSWQQMQSEVARWQTALSYL
NLQRGDRVAIMLRNCPAWIAFDQAALSLGLVTVPLYTVDRPDNLAYIVNDSGAKVLLFES
AEQWLGLRTVREQLQDVVRFVSLDSLPDLDEARLISMAKFLPETAQLLPAAVCRMDELAS
IIYTSGTTGKPRGVMLSHGNMLSNARACLDTFSVRSEDVFLSFLPLSHTFERTLGYYLTV
MTGATVAFARSIQTLSEDMQVIRPTLLISVPRIYERIYAVIRAKLEDGPRFKRRLFYLAV
ETGWAMFEHQQGRGPWRASFLLWPVLQKLVAQKVLDKLGGRLRVAISGGAALAAEFSRVF
VGLGLPIVQGYGLTETSPVISGNHLGNNFPDSVGQPISGVEVRLGALSELQVRGPNVMLG
YWNNPEATRATLAADGWLRTGDIGHISDTGHIYITGRIKEIIVMSNGEKIPPTDMELAIL
HDPLFEQVMVFGEAHPYLVVLAVLNPQVWLHFAHEVGIRPDMPEALTDSRIEAKVLRRIA
RNLRGFPGYAKVNRVLLLREPWSIDNGLLTPTMKLRRDEVTRRFAAEIKQLYERR
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaaataatttcacccgcagaagccggcagcttgcacggcttgtttttggagcgt
gtacgccgcacacccgacaagatcgcctaccgttatttcgggaacaatgcctggcaggaa
ctgagttggcagcagatgcagtctgaggtggcgcgctggcagacggcgttaagctatctt
aatttgcagcgtggcgaccgggtcgccatcatgttgcgcaactgcccggcatggattgca
ttcgatcaggcagcgctctcgctcggactggtcacggtgcccctgtataccgtagatcgg
ccggataatcttgcctacatcgtaaacgactcgggggccaaagtcttgttgtttgaatcg
gccgagcaatggctggggctgcgcacggtgcgcgaacagttgcaggacgtggtgcgtttt
gtgagcctcgactctttgccggatttggatgaggcgcggctgatttcgatggcgaaattt
ttaccggagaccgcgcaactgctgccggctgccgtctgccggatggatgagttagccagc
attatttacacctcaggcacgacaggtaagccccgtggcgtgatgttgagtcatggcaat
atgctgagtaatgcgcgcgcttgtctggatactttttcggtccgtagcgaggatgtgttc
ttgtcattcttaccgttgtcgcacacctttgagcgtacgctgggctattacctgactgtg
atgacgggggctacggtcgcattcgcacgttctattcagaccttgtcggaggatatgcag
gtcatacgcccgacgctgctgatctcggtgccgcgtatctatgagcggatttacgcggtt
atccgcgccaagctagaggatggtccgcgctttaaacgccggcttttttatctggcggtt
gaaacgggctgggcgatgtttgagcaccagcaggggcgcggtccctggcgcgcgtccttt
ttgctttggcctgtgctgcaaaaactggtagcgcaaaaagtgctcgataaattgggtgga
cgattgcgggtggcgattagcggcggggctgcgctggcagcggaattctcccgggtattt
gtcggcttagggctgcctatcgtgcaaggctacgggctgaccgaaaccagtcctgtgatc
agcggaaatcatctgggaaataactttcccgacagcgtcggtcagccaataagcggcgtt
gaggtgcgcttgggcgcattgagcgaattgcaggtcagagggccaaatgtgatgctgggc
tactggaataatccggaggcgacccgtgcaacgctcgctgccgacggttggcttcgaacg
ggcgatatcgggcatatctcggatacagggcacatttacatcacagggcgcatcaaggaa
atcatcgtgatgtcgaacggtgaaaagattccgcccaccgacatggaactggcgattttg
cacgaccctttgttcgaacaggtgatggtattcggtgaggcgcatccgtatctggtggtg
ctggccgtgctcaacccgcaagtatggttgcattttgcccatgaagtcggtatccgccct
gacatgcccgaagcgttgaccgacagccggatcgaagcgaaggtgctgcgccgcattgcg
cgaaatctgcgcggatttccaggctatgccaaggttaatcgggtattgctgctgcgcgaa
ccctggagtatcgacaacggtttactgacgccgacgatgaaactacgccgcgatgaagtc
acccgccgctttgcggcggaaattaagcagctctacgagaggcgctga
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