Gallionella capsiferriformans: Galf_2094
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Entry
Galf_2094 CDS
T01295
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
gca
Gallionella capsiferriformans
Pathway
gca00300
Lysine biosynthesis
gca00470
D-Amino acid metabolism
gca01100
Metabolic pathways
gca01110
Biosynthesis of secondary metabolites
gca01120
Microbial metabolism in diverse environments
gca01230
Biosynthesis of amino acids
Module
gca_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gca00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Galf_2094
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Galf_2094
Enzymes [BR:
gca01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Galf_2094
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ADL56099
UniProt:
D9SI09
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All DBs
Position
complement(2273250..2274503)
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AA seq
417 aa
AA seq
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MTMSNQFNYINNQLHAEDVSLSDIAAVHETPCYVYSRAALTEGFREFSDALQGREHLICY
AVKANANLAILNVFARLGAGFDIVSGGELQRVLAAGGDARKVVFSGVGKTRAEMRLALDA
GILCFNVESAAELDRLNEVAGSMGKIAAISLRVNPDVDAKTHPYISTGLKQNKFGVAYTE
AVALYRKASGLKNLRITGMDCHIGSQLTETSPFIAAIEKILLLVDELASEGIALEHLDLG
GGLGICYDDETPPAIGEYIAALLGALQGRTQKLILEPGRVLVGNAGVLLTRVEYIKPGEE
KNFAIVDAAMNDLMRPALYDAYHGILPVVREAHAVQSYEVVGPICETGDFIGHARELAIA
PHSLLAVMSAGAYGMSMSSNYNTRPRAAEVMVDGTAVHLVRERETVPQLFSGEKTLA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgactatgagcaatcaatttaattacattaataatcaactgcatgcggaagatgtctcg
ctgagcgatatcgcagctgtccatgaaacgccttgttatgtgtattcgcgcgccgcgtta
accgaaggttttcgtgagttttcagatgccctgcaaggtcgcgaacacctgatttgttat
gcggtgaaggcgaacgcgaatctggccatcctgaatgtatttgcgcgtctgggtgcggga
ttcgatatcgtctcaggcggcgaattgcagcgcgtgctggcagcagggggcgatgcgcgt
aaggtggttttttccggtgtcgggaaaacgcgtgctgaaatgcgtctggcgctggacgcg
ggtatcttgtgtttcaacgtggaatcggccgcagagctcgaccgtttgaatgaggtcgcg
ggcagcatgggtaaaatcgcggcgatcagcctgcgcgtgaatcccgatgtggacgctaaa
acccacccttatatctcgaccggcctcaaacaaaacaagttcggcgtggcttataccgag
gcggttgccttatatcgtaaggcgagcggattaaagaacttgcgtatcaccggcatggat
tgccacatcggctctcagttgaccgaaaccagtccgtttatcgccgccatcgaaaagata
ctgctgctggtcgatgaactggcatcggaaggtattgcactcgaacacctcgatctgggc
ggcggtttgggaatttgctatgacgatgagacgccgcctgcgataggtgaatatatcgcg
gccttattgggcgcattacaggggcgcacgcaaaaactgatcctggagccggggcgcgtg
ctggtgggtaatgccggcgtgttgctcacccgcgtggaatacattaagccgggtgaagag
aaaaattttgccatcgtggatgcggcgatgaacgatctgatgcgccccgctttatacgat
gcgtatcacggtattttgccggtggtgcgcgaggcccatgcggtgcaaagctatgaagtt
gtcggccccatctgcgagacgggcgatttcatcgggcatgcgcgtgagttggcgattgcg
ccgcactcgttgctcgcggtgatgtcggccggcgcttatggcatgagtatgagctccaac
tacaatacgcgccctcgcgccgctgaggtgatggtggatggtactgcggtgcatctggtg
cgcgaacgtgaaaccgtgccgcaactgttttctggtgaaaaaacgctcgcgtag
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