Gallionella capsiferriformans: Galf_2165
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Entry
Galf_2165 CDS
T01295
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
gca
Gallionella capsiferriformans
Pathway
gca03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gca00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Galf_2165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gca03019
]
Galf_2165
03009 Ribosome biogenesis [BR:
gca03009
]
Galf_2165
Messenger RNA biogenesis [BR:
gca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Galf_2165
Ribosome biogenesis [BR:
gca03009
]
Eukaryotic type
Pre-60S particles
RNases
Galf_2165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ADL56170
UniProt:
D9SIK7
LinkDB
All DBs
Position
complement(2347380..2347925)
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AA seq
181 aa
AA seq
DB search
MAQNQNHLVWIDMEMTGLNPDTDRIIEVAIVVTDSNLETIAEAPVLVVHQPDSIMDGMDA
WNKSTHGKSGLIERVKASTLNEAAVSAQMVAFLKEYVPIRTSPMCGNSICQDRRFMARWM
PEFEEYFHYRNLDVSTLKELARRWKPDMAKGVKKHGKHEALADIYESIEELKHYREHFIK
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaaatcaaaaccaccttgtctggatagacatggaaatgaccggcttgaacccg
gataccgaccgcatcatcgaagtcgcaatcgttgtgacagacagtaatctggagaccatc
gccgaagcgccggtgctggtcgtacatcagcccgacagcatcatggacggcatggacgca
tggaataaatccacgcacggcaaatcaggcctgatcgaacgggtcaaagcatcgaccctg
aatgaagcggccgtgtctgcgcaaatggtcgcattcctcaaggaatatgtgcctatccgc
acctcccctatgtgcggcaactcgatttgtcaggacaggcgttttatggcgcgctggatg
ccggaattcgaggagtacttccattaccgcaatttagatgtcagtacgctcaaggaattg
gcccgtcgctggaagcccgatatggcaaaaggcgtcaaaaaacacggcaaacacgaggcg
ctcgccgacatttacgagtcgatcgaagagctcaaacactatcgcgagcatttcatcaaa
ctgtga
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