Gallionella capsiferriformans: Galf_2631
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Entry
Galf_2631 CDS
T01295
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
gca
Gallionella capsiferriformans
Pathway
gca03030
DNA replication
gca03430
Mismatch repair
gca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Galf_2631
03430 Mismatch repair
Galf_2631
03440 Homologous recombination
Galf_2631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gca03032
]
Galf_2631
03400 DNA repair and recombination proteins [BR:
gca03400
]
Galf_2631
Enzymes [BR:
gca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Galf_2631
DNA replication proteins [BR:
gca03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Galf_2631
DNA repair and recombination proteins [BR:
gca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Galf_2631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DUF6611
Motif
Other DBs
NCBI-ProteinID:
ADL56627
UniProt:
D9SCP7
LinkDB
All DBs
Position
complement(2834104..2834808)
Genome browser
AA seq
234 aa
AA seq
DB search
MISSVLRWFRRPDLTDEQQRRLSLWRALPAVSAHQAIKATRCVVVDVETSGLNLWEDRLI
SIGAVAVVNGKIELGDSFYIVLQQEIVSEKENILLHGIGGAAQAEGVPAADALLAFLAFL
QKDPLIAFHVTFDQTMIVRAISKYLGFSFKQPWSDMAYVMPALNPELAARFRSLDDWIAH
FDIRNDARHNALADALVTAQLFQVGASQASGRNIADFAALRDLEKAQRWVSEVG
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
gtgatcagttcggtgttgcgctggtttcgccggccagacttgactgacgagcaacaacgc
aggctgtcgctctggcgcgcgctacctgccgtgtcggctcatcaggcaataaaggctacg
cgttgtgtggtggtcgatgtggagactagcggattgaatttgtgggaagatcggctgatt
tccatcggcgcggtcgccgtggtcaacggaaaaattgagttgggggatagtttttatatc
gtattacagcaggaaatcgtcagcgaaaaggaaaatatcttgctgcacgggattggtggt
gctgcgcaggctgaaggggtgccggcggccgatgcgttgctggcctttctggcattcttg
caaaaggatccgctgatcgcgtttcatgtcacgttcgatcagaccatgatagtgcgtgcg
atcagcaagtatctggggttttccttcaagcaaccctggtccgatatggcctatgtgatg
cccgcactcaatcctgagttagctgcgcgttttcgttcactggatgactggatagctcac
tttgatatacgcaacgacgcgcgtcacaatgcgctggcggacgcgctggtcaccgcgcaa
ttgtttcaggtcggcgcttcacaggcatcgggccggaatattgccgattttgctgcgctg
cgtgatctggaaaaggcgcaacgctgggtgagcgaagtcgggtga
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