Gallionella capsiferriformans: Galf_2860
Help
Entry
Galf_2860 CDS
T01295
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
gca
Gallionella capsiferriformans
Pathway
gca00730
Thiamine metabolism
gca01100
Metabolic pathways
gca01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
gca00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Galf_2860
Enzymes [BR:
gca01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
Galf_2860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
DUF6278
Motif
Other DBs
NCBI-ProteinID:
ADL56852
UniProt:
D9SE30
LinkDB
All DBs
Position
3072806..3074677
Genome browser
AA seq
623 aa
AA seq
DB search
MNANTKFTADAAHVDAAAIKPLPNSRKIYVEGSRPDIRVPMREISQADTPDGMGAEINAP
IYVYDCSGPYTDPAVKIDIRSGLALMREAWIVERDDTEVLPKLTSDYGQKRLDDPELAEM
RFNLSRAPRRAKPGKNVTQMHYARQGIITPEMEYIAIRENQKVDGMNEMMLRQHPGENFG
NSMPKKITPEFVRDEVAAGRAVITANINHPEIEPMIIGRKFLVKINANIGNSALGSSIQE
EVEKMTWAIRWGGDTVMDLSTGKHIHETREWIMRNSPVPIGTVPIYQALEKVNGKAEDLT
WEIFRDTLIEQAEQGVDYFTIHAGVLLRYVPMTANRMTGIVSRGGSIMAKWCLAHHKENF
LYTHFEDICEIMKAYDVTFSLGDGLRPGSIYDANDEAQLGELKTLGELTQVAWRHDVQVM
IEGPGHVPMHLIKENMDLQAKWCNDAPFYTLGPLTMDIAPGYDHITSAIGAAMIGWFGTA
MLCYVTPKEHLGLPNKADVKEGIITYKIAAHAADLAKGHPGAQVRDNALSKARFEFRWDD
QFNLGLDPDRAREFHDETLPKESAKVAHFCSMCGPHFCSMKISQDVRDFAAKEGISEQAA
LEKGMEVKSIEFVTKGSQLYSKS
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccaacactaaattcaccgctgacgccgcgcatgtcgatgccgccgcgatcaag
ccactccccaattcccgcaaaatttatgtcgaaggcagccgcccggatatccgcgtgccg
atgcgcgaaatctctcaagccgacacacccgatggcatgggcgctgaaatcaatgcgccg
atttacgtatacgattgctcaggcccctataccgatcctgccgtcaaaatcgacatccgc
tcaggcttagcactgatgcgcgaagcatggatcgtcgagcgcgacgacaccgaagtgttg
cctaaactgacttccgattacggccagaaacgcctggatgatccggagctcgccgagatg
cgttttaacctgagtcgcgcgccgcgccgtgccaaaccgggcaagaatgtcacccagatg
cactacgcacgtcagggcatcatcacgcctgaaatggaatacatcgcgattcgcgaaaat
caaaaagtcgacggcatgaacgagatgatgctgcgccagcatcccggggaaaatttcggc
aattcgatgccaaaaaaaatcacgcctgaattcgtgcgcgatgaagtcgctgccggccgc
gcggtcatcaccgccaacatcaaccatccggaaatcgaaccgatgatcatcggccgcaag
tttctggtcaagatcaacgccaatatcggcaattcagcactgggttccagcatccaggaa
gaagtcgaaaagatgacctgggcgattcgctggggcggcgacacggtgatggatctgtcc
accggcaaacacatccacgagacgcgcgaatggatcatgcgcaattctcccgtgccgatc
ggcaccgtgccgatttatcaggcgctggaaaaggtcaacggtaaagccgaagacctgacc
tgggaaatcttccgcgacacgctgatcgaacaggccgaacaaggtgtggattacttcacc
attcacgcaggcgtcttgctgcgctacgtgccgatgaccgcgaatcgcatgaccggcatc
gtctcgcgcggcggttctatcatggcaaaatggtgtctggcgcaccataaggaaaacttc
ctttacacccatttcgaagacatctgcgaaatcatgaaggcctatgacgtgaccttcagc
ttgggcgacggtctgcgccccggttcgatttacgatgcaaacgacgaagcgcaattgggc
gaattgaagaccctgggcgaactcacccaagttgcctggcgccacgacgttcaggtgatg
atcgaaggcccgggccacgtgcctatgcatctgatcaaagagaacatggacttgcaagcc
aagtggtgcaacgacgcgccgttctatacattaggccctctgaccatggacatcgcgccg
ggctacgatcacatcaccagcgccattggcgctgcgatgataggctggttcggtaccgct
atgctgtgctacgtcacgcctaaagaacacttaggcttgccgaacaaagcggacgtcaaa
gaaggcatcatcacctacaagatcgcagcgcatgcggcggatctggccaagggacatccg
ggcgcacaggttcgtgacaatgcactgtcaaaagcgcgtttcgaattccgctgggacgac
cagttcaatctgggcttggatcctgatcgtgcgcgtgaattccatgacgagacactgccg
aaagagtccgccaaggtcgctcacttctgctcgatgtgcggcccgcatttctgctcgatg
aaaatctcgcaagacgtgcgcgacttcgcggcaaaggagggcatctcggaacaagcggcg
ctggagaagggcatggaagtcaaatccatcgaattcgtcactaaaggcagccagctctac
agcaaatcctga
DBGET
integrated database retrieval system
