Gymnodinialimonas ceratoperidinii: KYE46_01075
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Entry
KYE46_01075 CDS
T08063
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
gce
Gymnodinialimonas ceratoperidinii
Brite
KEGG Orthology (KO) [BR:
gce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gce03032
]
KYE46_01075 (gyrB)
03400 DNA repair and recombination proteins [BR:
gce03400
]
KYE46_01075 (gyrB)
Enzymes [BR:
gce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KYE46_01075 (gyrB)
DNA replication proteins [BR:
gce03032
]
Prokaryotic type
DNA Topoisomerases
KYE46_01075 (gyrB)
DNA repair and recombination proteins [BR:
gce03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KYE46_01075 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
GyrB_insert
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QXT39884
UniProt:
A0A8F6TXR1
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Position
206553..208970
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AA seq
805 aa
AA seq
DB search
MSDTPANAEDYGADSIKVLKGLEAVRKRPGMYIGDTDDGSGLHHMVYEVVDNGIDEALAG
HADAVTVTIHADSSVSVSDNGRGIPVGIHEEEGVSAAEVIMTQLHAGGKFDSNSYKVSGG
LHGVGVSVVNALSDWLELRIWRDGKEHIARFERGDTARHLEVVGDANGRTGTEVRFMAST
DTFSNLDYVFTTLENRLRELAFLNSGVRIILRDERPAEALESELFYEGGVREFVRYLDRS
KTSSMEEPIFITGEKDDIGVEVAMWWNDSYHENVLPFTNNIPQRDGGTHLAGFRGALTRT
INLYAQSSGIAKREKVNFTGDDAREGLTCVLSVKVPDPKFSSQTKDKLVSSEVRPAVEGL
VNEKLAEWFEEHPNEAKQIVGKIIEAALAREAARKARELTRRKTAMDIASLPGKLADCQE
KDPAKSELFLVEGDSAGGSAKQGRSRHNQAILPLKGKILNVERARFDRMLGSQEIGTLIT
ALGTGIGRDEFNIDKLRYHKIVIMTDADVDGAHIRTLLLTFFFRQMPELIEGGYLYIAQP
PLYKVSRGKSEVYLKDEAAFEDYLIAQGIEGASLRLPSGEEIVGQDLARVVAGARNFKRI
LDAFPTHYPRHIVEQAAIAGAFDSGKADADLQGVADDVAKRLDLVAVEYERGWNGRITQD
HGIRLSRVLRGVEEIRTLDGAVLRSGEARKLAEVSRDSRTIYQDPATLSRRDREQLIHGP
TELLSAILEEGARGQQMQRYKGLGEMNPDQLWETTLDPDARTLLQVKVADLADADDIFTK
LMGDVVEPRREFIQNNALSVENLDF
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacacacccgcaaacgccgaagactacggcgccgattccatcaaggttctcaaa
ggcttggaggctgttcgcaagcgccccggcatgtacatcggggataccgatgacggctcg
ggcctgcaccacatggtctacgaggtcgtggacaacggcatcgacgaggcgctggccggc
catgccgatgccgttaccgtgacgattcacgcggattccagcgtttccgtgagcgacaac
gggcgcggcattccggtgggcatccacgaggaagagggcgtctcggcggcggaggtcatc
atgacccagctgcacgcgggcggtaagttcgacagcaactcctacaaggtttcgggcggc
ctgcacggcgtgggcgtctcggttgtgaacgcgctctccgactggctggagctgcggatc
tggcgcgacggcaaggaacatatcgcgcgcttcgagcgcggcgataccgcaaggcacctc
gaagtggtgggtgacgcgaacggccggactggcaccgaagtgcgcttcatggcctcgacc
gatacgttctcgaacctagattacgtcttcaccacgctggagaaccgcctgcgcgagctg
gccttcctgaactccggcgtgcggatcatcctgcgcgacgagcgcccggcggaagcactg
gagtcagagctgttctacgagggcggcgtgcgcgaattcgtccgctacctcgaccgctcc
aagacctcctcgatggaggagccgatcttcatcaccggcgagaaggacgacatcggcgtc
gaagtcgccatgtggtggaacgacagctaccacgagaacgtcctgccgttcaccaacaac
atcccccagcgcgacggcggcacccaccttgcgggcttccggggcgcgctgacgcggacc
atcaacctctacgcccagtccagcggcatcgccaagcgcgagaaggtgaacttcaccggc
gatgacgcccgcgaggggctgacctgcgtgctctcggtcaaggtgccggacccgaagttc
tcctcgcagacgaaggacaagctcgtctcctccgaggtgcgtcccgccgtggaaggcctc
gtgaacgagaagctggcggaatggttcgaggagcacccgaacgaggccaagcagatcgtc
ggcaagatcatcgaggccgcgctggcccgtgaagccgcacgcaaggcgcgcgagctgacc
cggcgcaagacagcgatggacatcgcctcactgcccggcaagctggccgattgtcaggag
aaggatcccgccaagtccgagctgttcctggtggagggtgactccgccggcggctccgcc
aagcagggccgctcgcggcacaaccaggcgatcctgccgttgaaaggcaagatcctcaac
gtcgagcgcgcgcgcttcgaccggatgctcggcagtcaggagatcggcacgctgatcacg
gcgctcggcaccggcatcggccgcgacgagttcaacatcgacaagctgcgctaccacaag
atcgtcatcatgaccgatgccgacgtggacggcgcccacatccgcaccctgctgctgacc
ttcttcttccgccagatgccggagctgatcgagggcggctatctctatattgcgcagccg
ccgctctacaaggtgagccgcggcaagtccgaggtctacctcaaggacgaggccgccttc
gaggattacctgatcgcccagggcatcgagggcgccagcctgcgcctgccttccggcgag
gaaatcgtcgggcaggacctcgcccgcgtggttgccggggcgcgcaatttcaagcgcatc
ctcgatgccttcccgacccattacccccgccacatcgtggagcaggccgccattgccggt
gcgttcgacagcggcaaggccgatgcggacctgcagggcgtcgccgatgacgtcgccaag
cgcctcgacctcgtggctgtcgaatacgagcgcggctggaacggccgcatcacccaggat
cacggcatccgcctgtcccgcgttctgcgcggcgtggaagagatccgcaccctcgacggc
gccgtgctgcgctcgggcgaggcgcgcaagctcgccgaggtctctcgcgacagccgcacg
atctatcaggatcccgccacgctctcgcgccgggaccgggaacagttgatccacggaccg
accgaattgctcagcgcgatcctcgaagagggcgcgcgcggccagcagatgcagcgctac
aagggactgggcgagatgaaccccgaccagctctgggaaaccacgctcgatcccgacgcg
cggaccctgctgcaggtcaaggtcgccgacctcgccgacgccgacgatatcttcaccaag
ctgatgggcgatgtcgtcgaaccccggcgcgagttcatccagaacaacgccctcagcgtc
gagaacctcgatttctga
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