Gymnodinialimonas ceratoperidinii: KYE46_01690
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Entry
KYE46_01690 CDS
T08063
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
gce
Gymnodinialimonas ceratoperidinii
Pathway
gce03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KYE46_01690 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gce03021
]
KYE46_01690 (rho)
03019 Messenger RNA biogenesis [BR:
gce03019
]
KYE46_01690 (rho)
Transcription machinery [BR:
gce03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
KYE46_01690 (rho)
Messenger RNA biogenesis [BR:
gce03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KYE46_01690 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
NACHT
AAA_22
AAA_25
OB_RNB
ATPase_2
AAA
Motif
Other DBs
NCBI-ProteinID:
QXT40001
UniProt:
A0A8F6TW27
LinkDB
All DBs
Position
327911..329182
Genome browser
AA seq
423 aa
AA seq
DB search
MTVETLRLADLKAKTAKDLLPMAEELEIENASTMRKGDMMFEILRERAEEGWEISGDGVL
EVLQDGFGFLRSPEANYLAGPDDIYVSPDMIRQHSLRTGDTVEGVMSAPKENERYFCLVN
VTQINFEEPEKAKHKVAFDNLTPLYPDERMTMEIEDPTIKDRSARIIDLVSPIGKGQRSL
IVAPPRTGKTVLLQNIAHSIETNHPECYLIVLLIDERPEEVTDMQRSVKGEVISSTFDEP
ATRHVAVSEMVIEKAKRLVEHKRDVVILLDSITRLGRAFNTVVPSSGKVLTGGVDANALQ
RPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKIADKRVY
PAMDILKSGTRKEDLLVDKGDLQKTFVLRRILNPMGTTDAIEFLISKLKQTKTNSEFFDS
MNT
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgacagttgaaacgcttcgtcttgctgacctgaaagcgaaaaccgcgaaagatcttctg
ccgatggcggaagagctcgagatcgagaacgcctccaccatgcggaagggggacatgatg
ttcgagatcctccgggagcgggcggaagaaggttgggagatctctggagacggtgtgctt
gaagtcttgcaggacggtttcggtttcctgcgaagccccgaggcgaactatctggcggga
ccggacgatatttacgtgtcgcccgacatgatccgccagcattccctgcggacgggcgat
accgtcgaaggtgtgatgtcggcacctaaggagaatgagcggtacttctgcctggtcaat
gtcacgcagatcaacttcgaggaacctgagaaggcgaagcacaaagttgcgttcgacaac
ctgacgcctctctaccctgacgagcggatgacgatggagatcgaagatccgacgatcaag
gatcgctcggctcgtattatcgacctggtttcgcccatcggtaagggtcagcgtagcttg
atcgtggcgccgccgcggacgggtaagacggttttgctgcagaatatcgcgcattcgatc
gagaccaatcatccggaatgctacctgatcgttcttttgatcgacgagcggccggaggaa
gtgacggatatgcagcgctcggtgaagggcgaggttatctcctccacctttgacgagccg
gcgacgcgtcacgttgctgtctccgagatggtgatcgagaaggcgaagcgtttggtcgag
cataagcgcgacgttgtgatcctgctcgactcgatcacgcgcctcggccgggcgttcaac
accgtggtaccgtcgtcgggcaaggttctgaccggtggtgttgatgcgaacgcgctgcag
cgtccgaaacggttcttcggtgccgcgcgaaacatcgaggaaggcggctccctcacgatc
atcgcgacggcgctgattgatacgggcagccggatggatgaggttatcttcgaagaattc
aagggtacgggtaacagcgagatcgttctcgatcggaagattgcggacaagcgtgtctat
cctgcgatggacatcctcaagtccggcacgcggaaagaggatctgctggtcgacaagggc
gatttgcagaagacctttgtgctacgacgcatcctcaacccgatggggaccacggacgcg
atcgagttcctgatctcgaagttgaaacagaccaagaccaactcggagttcttcgactcc
atgaacacctaa
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