Gymnodinialimonas ceratoperidinii: KYE46_02765
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Entry
KYE46_02765 CDS
T08063
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
gce
Gymnodinialimonas ceratoperidinii
Pathway
gce03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KYE46_02765 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gce03019
]
KYE46_02765 (pnp)
03016 Transfer RNA biogenesis [BR:
gce03016
]
KYE46_02765 (pnp)
Enzymes [BR:
gce01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
KYE46_02765 (pnp)
Messenger RNA biogenesis [BR:
gce03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KYE46_02765 (pnp)
Transfer RNA biogenesis [BR:
gce03016
]
Prokaryotic type
tRNA degradation factors
KYE46_02765 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
QXT40198
UniProt:
A0A8F6TXD5
LinkDB
All DBs
Position
564952..567078
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AA seq
708 aa
AA seq
DB search
MFNIVKKEIQWGEETLTLETGRVARQADGSVIATLGETSVMANVTFAKQPKPGMDFFPLT
VHYQEKYYAAGKVPGGFFKREARPTEKETLTARLIDRPIRPLFVPGFKNETLVMCTVLSH
DLVNDPDMVAMIAASAALTISGAPFRGPIAGCRVGFEDGEYILNPEIDDMHDLRNNPDQR
LDLVVAGTKDAVMMVESEAYELTESEMLGAVKFAHDSIQPVIDLIIDLAEDAAKEPFDFQ
APDYSELFEAVRSAGEDKMREAYAISDKLERQAAVAAVKEGVKEGLSEEQLEDPNLSAAL
KKLESTVLRSDVVKNGRRIDGRALDEIRDIVAETKVLPRTHGSALFTRGETQALCVTTLG
TGDDEQFIDALHGNFKSNFLLHYNFPPYSVGEAGRVGPPGRREIGHGKLAWRALQAVLPA
PTDFPYTVRMVSEITESNGSSSMASVCGGSLSMMDAGVPLKAAVAGVAMGLVLEEDGSYG
ILSDILGDEDHLGDMDFKVAGTEAGITSLQMDIKVAGITQEIMEKALEQAKAGRLHILGE
MAKAVSEAGEFSEHAPRIETMQIPTDKIREVIGSGGKVIREIVEVSGAKVDINDEGIIKI
ASPNGEAIKKAYDMIHSIVAEPEEGKIYKGKVVKIVDFGAFVNFFGKRDGLVHVSQIKNE
RLNHPSDVLSEGQEVWVKLLGFDDRGKVRLAMKMVDQETGEEVSKADA
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacattgttaagaaagagatccagtggggcgaagaaacgctgacgctggaaacc
ggccgtgtggctcgccaggccgatgggtctgtcattgcgacgttgggggaaacctccgtc
atggcgaacgtgaccttcgccaagcaaccgaagcccggaatggatttcttcccgcttacg
gttcactaccaggaaaaatactacgctgcgggcaaggtccccggcggtttcttcaagcgt
gaggcccgccccaccgagaaggaaacactcaccgcgcgtctgatcgaccgtccgatccgc
ccgctgttcgtccccggtttcaagaacgaaaccctcgtgatgtgcaccgtgctgtcccac
gacctcgtcaacgaccccgacatggtcgcgatgatcgcggcttccgctgcgctgaccatc
tccggtgcgccgttccgcggcccgatcgccggttgccgcgtgggcttcgaggatggcgaa
tacatcctgaaccccgagatcgacgacatgcacgatctgcgcaacaaccccgatcagcgc
ctcgatctggttgttgcaggcaccaaggacgccgtgatgatggtggaatcggaagcctat
gagctgaccgaatccgaaatgctcggcgcggtgaaattcgcccacgacagcatccagccg
gtcatcgacctgatcatcgatctggccgaagacgccgcgaaagagccgttcgacttccag
gcccccgattactcggagctgttcgaagccgttcgttccgccggcgaagacaagatgcgc
gaagcctatgcgatctccgacaagctggagcgtcaggccgccgttgccgccgtcaaggaa
ggcgtgaaggaaggcctctcggaggagcagctggaggatccgaacctctccgccgccctg
aagaagctggaatccaccgtgcttcgttcggacgtcgtcaagaacggtcgccgcatcgac
ggccgtgccctggacgagatccgtgacatcgtggccgagaccaaggtcctgccccggacc
cacggctccgcgctgttcacccgtggcgagacccaggcgctttgcgtcaccacgctcggc
accggtgacgacgagcagttcatcgacgcgctgcacggcaacttcaaatccaacttcctg
ctgcattacaacttcccgccctactcggtcggcgaagcaggtcgcgtgggccctccgggc
cgccgcgagatcggtcacggcaagctggcatggcgcgccctgcaggcggttctgcccgcc
ccgaccgacttcccctacaccgtgcgcatggtctccgagatcactgaatccaacggctcg
tcctccatggcgtccgtttgcggtggctccctctccatgatggacgcgggcgttccgctg
aaggcagcggttgccggtgtcgccatgggtctggtgctggaagaggacggctcctacggc
atcctgtccgacatcctgggtgacgaagatcacctcggcgacatggacttcaaggttgcc
ggtaccgaagcgggcatcacgtccctgcagatggacatcaaggtcgccggcatcacgcaa
gagatcatggaaaaggcgctggagcaggcgaaagccggtcgtctccacatcctcggcgag
atggcgaaagccgtgtccgaagcgggtgagttctccgagcacgcgccgcgcatcgagacc
atgcagatcccgaccgacaagatccgtgaagtgatcggctcgggcggcaaggtcatccgc
gagatcgtggaagtctcgggcgccaaggtcgacatcaacgacgaaggcatcatcaagatc
gcctcgccgaacggtgaagccatcaagaaggcctacgacatgattcactcgatcgtggcg
gagccggaagagggcaagatctacaagggcaaggtcgtgaagatcgtcgacttcggcgcc
ttcgtgaacttcttcggcaagcgcgatggcctggtccacgtgtcccagatcaagaacgag
cgcctgaaccacccctccgacgtcctctccgagggccaggaagtctgggtcaagctcctg
ggcttcgacgatcgcggcaaggtccgccttgcgatgaagatggtcgaccaggaaactggc
gaagaagtctccaaggcagatgcctaa
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