KEGG   Gymnodinialimonas ceratoperidinii: KYE46_02765
Entry
KYE46_02765       CDS       T08063                                 
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
gce  Gymnodinialimonas ceratoperidinii
Pathway
gce03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gce00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    KYE46_02765 (pnp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gce03019]
    KYE46_02765 (pnp)
   03016 Transfer RNA biogenesis [BR:gce03016]
    KYE46_02765 (pnp)
Enzymes [BR:gce01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     KYE46_02765 (pnp)
Messenger RNA biogenesis [BR:gce03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     KYE46_02765 (pnp)
Transfer RNA biogenesis [BR:gce03016]
 Prokaryotic type
  tRNA degradation factors
   KYE46_02765 (pnp)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 PNPase KH_1 S1_RRP5 KH-I_KHDC4-BBP
Other DBs
NCBI-ProteinID: QXT40198
UniProt: A0A8F6TXD5
LinkDB
Position
564952..567078
AA seq 708 aa
MFNIVKKEIQWGEETLTLETGRVARQADGSVIATLGETSVMANVTFAKQPKPGMDFFPLT
VHYQEKYYAAGKVPGGFFKREARPTEKETLTARLIDRPIRPLFVPGFKNETLVMCTVLSH
DLVNDPDMVAMIAASAALTISGAPFRGPIAGCRVGFEDGEYILNPEIDDMHDLRNNPDQR
LDLVVAGTKDAVMMVESEAYELTESEMLGAVKFAHDSIQPVIDLIIDLAEDAAKEPFDFQ
APDYSELFEAVRSAGEDKMREAYAISDKLERQAAVAAVKEGVKEGLSEEQLEDPNLSAAL
KKLESTVLRSDVVKNGRRIDGRALDEIRDIVAETKVLPRTHGSALFTRGETQALCVTTLG
TGDDEQFIDALHGNFKSNFLLHYNFPPYSVGEAGRVGPPGRREIGHGKLAWRALQAVLPA
PTDFPYTVRMVSEITESNGSSSMASVCGGSLSMMDAGVPLKAAVAGVAMGLVLEEDGSYG
ILSDILGDEDHLGDMDFKVAGTEAGITSLQMDIKVAGITQEIMEKALEQAKAGRLHILGE
MAKAVSEAGEFSEHAPRIETMQIPTDKIREVIGSGGKVIREIVEVSGAKVDINDEGIIKI
ASPNGEAIKKAYDMIHSIVAEPEEGKIYKGKVVKIVDFGAFVNFFGKRDGLVHVSQIKNE
RLNHPSDVLSEGQEVWVKLLGFDDRGKVRLAMKMVDQETGEEVSKADA
NT seq 2127 nt   +upstreamnt  +downstreamnt
atgttcaacattgttaagaaagagatccagtggggcgaagaaacgctgacgctggaaacc
ggccgtgtggctcgccaggccgatgggtctgtcattgcgacgttgggggaaacctccgtc
atggcgaacgtgaccttcgccaagcaaccgaagcccggaatggatttcttcccgcttacg
gttcactaccaggaaaaatactacgctgcgggcaaggtccccggcggtttcttcaagcgt
gaggcccgccccaccgagaaggaaacactcaccgcgcgtctgatcgaccgtccgatccgc
ccgctgttcgtccccggtttcaagaacgaaaccctcgtgatgtgcaccgtgctgtcccac
gacctcgtcaacgaccccgacatggtcgcgatgatcgcggcttccgctgcgctgaccatc
tccggtgcgccgttccgcggcccgatcgccggttgccgcgtgggcttcgaggatggcgaa
tacatcctgaaccccgagatcgacgacatgcacgatctgcgcaacaaccccgatcagcgc
ctcgatctggttgttgcaggcaccaaggacgccgtgatgatggtggaatcggaagcctat
gagctgaccgaatccgaaatgctcggcgcggtgaaattcgcccacgacagcatccagccg
gtcatcgacctgatcatcgatctggccgaagacgccgcgaaagagccgttcgacttccag
gcccccgattactcggagctgttcgaagccgttcgttccgccggcgaagacaagatgcgc
gaagcctatgcgatctccgacaagctggagcgtcaggccgccgttgccgccgtcaaggaa
ggcgtgaaggaaggcctctcggaggagcagctggaggatccgaacctctccgccgccctg
aagaagctggaatccaccgtgcttcgttcggacgtcgtcaagaacggtcgccgcatcgac
ggccgtgccctggacgagatccgtgacatcgtggccgagaccaaggtcctgccccggacc
cacggctccgcgctgttcacccgtggcgagacccaggcgctttgcgtcaccacgctcggc
accggtgacgacgagcagttcatcgacgcgctgcacggcaacttcaaatccaacttcctg
ctgcattacaacttcccgccctactcggtcggcgaagcaggtcgcgtgggccctccgggc
cgccgcgagatcggtcacggcaagctggcatggcgcgccctgcaggcggttctgcccgcc
ccgaccgacttcccctacaccgtgcgcatggtctccgagatcactgaatccaacggctcg
tcctccatggcgtccgtttgcggtggctccctctccatgatggacgcgggcgttccgctg
aaggcagcggttgccggtgtcgccatgggtctggtgctggaagaggacggctcctacggc
atcctgtccgacatcctgggtgacgaagatcacctcggcgacatggacttcaaggttgcc
ggtaccgaagcgggcatcacgtccctgcagatggacatcaaggtcgccggcatcacgcaa
gagatcatggaaaaggcgctggagcaggcgaaagccggtcgtctccacatcctcggcgag
atggcgaaagccgtgtccgaagcgggtgagttctccgagcacgcgccgcgcatcgagacc
atgcagatcccgaccgacaagatccgtgaagtgatcggctcgggcggcaaggtcatccgc
gagatcgtggaagtctcgggcgccaaggtcgacatcaacgacgaaggcatcatcaagatc
gcctcgccgaacggtgaagccatcaagaaggcctacgacatgattcactcgatcgtggcg
gagccggaagagggcaagatctacaagggcaaggtcgtgaagatcgtcgacttcggcgcc
ttcgtgaacttcttcggcaagcgcgatggcctggtccacgtgtcccagatcaagaacgag
cgcctgaaccacccctccgacgtcctctccgagggccaggaagtctgggtcaagctcctg
ggcttcgacgatcgcggcaaggtccgccttgcgatgaagatggtcgaccaggaaactggc
gaagaagtctccaaggcagatgcctaa

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