Gymnodinialimonas ceratoperidinii: KYE46_04885
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Entry
KYE46_04885 CDS
T08063
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
gce
Gymnodinialimonas ceratoperidinii
Pathway
gce03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KYE46_04885 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gce03400
]
KYE46_04885 (uvrB)
DNA repair and recombination proteins [BR:
gce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KYE46_04885 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KYE46_04885 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
UB2H
Sensor_actino
Kinesin
TrwB_AAD_bind
DUF87
eIF3_p135
Motif
Other DBs
NCBI-ProteinID:
QXT41358
UniProt:
A0A8F6U0K8
LinkDB
All DBs
Position
complement(997348..999477)
Genome browser
AA seq
709 aa
AA seq
DB search
MEGGKRFVMHSDFEPAGDQPTAIAELSQGIRDGERDQVLLGATGTGKTFTMAKMIEETQR
PAIILAPNKTLAAQLYSEFKNFFPENAVEYFVSYYDYYQPEAYVARSDTYIEKESQINEQ
IDRMRHSATRALLERDDVIIVASVSCIYGIGSVETYGAMTQDLHAGHDYDQRKVIADLVA
QQYRRNDAAFQRGTFRVRGDSLEVWPAHLEDSAWRLSFFGEELEGITEFDPLTGQKTGSF
DKIRIYANSHYVTPRPTMQQAMKGIKAELAMRLKQMIDEGKLLEAQRLEQRTNFDLEMLE
ATGVCNGIENYSRYLTGRAPGEPPPTLFEYIPDNAIVFADESHVSVPQIGGMYRGDYRRK
FTLAEHGFRLPSCMDNRPLKFEEWDAMRPQSVFVSATPAAWELEQAGGVFTEQVIRPTGL
LDPVIEIRPVEMQVDDLLDEVRKVAADGFRTLVTTLTKRMAEDLTEYMHEQGIRVRYMHS
DIDTLERIEILRDLRLGAFDVLIGINLLREGLDIPECGLVAILDADKEGFLRSETSLIQT
IGRAARNAEGRVIMYADKITGSMERAMRETERRRVKQLAYNEEHGITPATIKKNVDDILL
GVYQGDTDQARVTAKVDKPLVGANLQAHLEGLRDKMRKAAENLEFEEAARLRDEVKRLES
VELAIADDPLARQSAVEAAVEDAAKASGRSTGGRGGMRGGKARRGSAKR
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtggcaagcgtttcgtcatgcattcggacttcgagccggcaggcgaccagccg
acggcgattgcagagctgtcgcaggggatccgcgacggcgagcgggaccaggtgcttctg
ggggccacggggacgggcaagaccttcaccatggccaagatgatcgaggaaacgcagcgg
cctgcgatcattctggcgccaaacaagacgctggccgcgcaactttacagcgaattcaag
aacttctttccggagaacgctgtcgaatatttcgtcagctattacgactattaccagccc
gaggcctatgtcgcgcggtcggacacctacatcgagaaagaaagccagatcaacgagcag
attgaccggatgcgccactcggccacccgggcgctgctggagcgcgatgacgtgatcatc
gtggcctcggtctcctgcatctacggtatcggttcggtcgagacctacggcgccatgacg
caggacctgcacgccgggcatgactacgaccagcgcaaggtgatcgcggacctcgtggcg
cagcagtaccgccgcaacgacgccgccttccagcgcggcacttttcgcgtacgcggcgat
agcctggaggtctggcccgcccaccttgaggatagcgcctggcggttgtcgttctttggc
gaggagcttgaggggatcaccgagttcgacccgctgacaggacagaagaccggctctttc
gacaagatccggatctatgcgaattctcactacgtcacgccgcgacccacgatgcagcag
gcgatgaaaggcatcaaggccgagctcgcgatgcgtctgaagcagatgatcgacgagggg
aaactgctggaagcacaacggcttgagcagcgcacgaacttcgatctggagatgctggag
gccaccggtgtctgcaacgggatcgagaactattcgcgctatttgaccggacgtgcgccc
ggcgagcctccccctacccttttcgagtacatccccgacaacgccatcgtcttcgccgac
gaaagccacgtctcggtgccgcagatcggcggcatgtaccggggcgactaccggcgcaag
ttcaccctcgccgagcatggcttccgcctgccgtcctgcatggacaaccggcccctgaag
ttcgaggaatgggacgccatgcggccgcaatcggtcttcgtttcggcaacgcccgccgcg
tgggagttggagcaggcgggcggcgtcttcaccgaacaggtgatccgaccgaccggcctg
ctcgacccggtgatcgagatccgccccgttgaaatgcaggtcgacgacctgctggacgag
gttcgcaaggtcgcggcggatggcttccggacgctggtcaccacgctgaccaagcgcatg
gccgaggacctgacggaatacatgcacgagcagggcatccgggtgcgctacatgcactcg
gacatcgacacgctggagcggatcgagatcctgcgcgacctgcggctcggcgcttttgac
gtgctcatcgggatcaacctgctgcgcgaggggctcgacattcccgagtgcggcttggtc
gccattctggatgcggacaaggagggcttcctgcgctcggaaacctcgctgatccagacc
atcggccgcgccgcccggaacgccgaagggcgggtcatcatgtatgccgacaagatcacc
ggctcgatggagcgcgccatgcgcgagaccgagcgtcggcgggtcaagcaattggcctac
aacgaagaacacggcatcacgccggccacgatcaagaagaacgtcgatgacatcctgctt
ggcgtttaccaaggcgataccgatcaggcgcgggtcaccgccaaggtcgacaagccgctg
gtgggcgcgaaccttcaggcgcatcttgaagggctgcgtgacaagatgcgcaaggctgcc
gaaaacctcgagttcgaggaggccgcccgtttgcgcgatgaggtgaagcggctggaatcg
gtcgaacttgcgattgccgatgatccgttggcccgtcagtcagccgtggaggccgccgtt
gaggatgccgcaaaggccagcgggcgcagcaccggcgggcgcggcgggatgcgcggcggc
aaggcgcggcggggcagcgcgaaacggtga
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