Gymnodinialimonas ceratoperidinii: KYE46_07415
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Entry
KYE46_07415 CDS
T08063
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
gce
Gymnodinialimonas ceratoperidinii
Pathway
gce03410
Base excision repair
gce03430
Mismatch repair
gce03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KYE46_07415 (recJ)
03430 Mismatch repair
KYE46_07415 (recJ)
03440 Homologous recombination
KYE46_07415 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gce03400
]
KYE46_07415 (recJ)
DNA repair and recombination proteins [BR:
gce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
KYE46_07415 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KYE46_07415 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
KYE46_07415 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Prok-RING_1
Motif
Other DBs
NCBI-ProteinID:
QXT41034
UniProt:
A0A8F6YBJ5
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Position
complement(1516512..1518254)
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AA seq
580 aa
AA seq
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MSYLGVETSLTGRRWIGPSDEVERLAQTLMQRAEVEPAVAAILARRGVQPEEVVGFLAPA
LRDLLPDPMTLKDMEPAATRLVAAARKGERIAIFADYDVDGGASAALLICWLRALGREAT
LYIPDRIDEGYGPNEEAMAMLARDHDLIICVDCGTLSHGPIAAAKGADVMVLDHHLALAE
LPECVAVVNPNRQDEDGSCGHLCAAGVVFLVLVEANRRMRAAGESGPDLMGFLDLVALAT
VADVAPLVGVNRALVVQGLKVMARRQRPGLVALCDVGRLDRAPTSYHLGFVLGPRVNAGG
RIGAADLGARCLSTDNAGEAGKLAAQLDSLNTDRRDIEQRVREAALAQCETRGLDAPLIW
AAEDGWHPGVVGIVASRLKDHSRRPAMVIGFDGDEGKGSGRSVAGVDLGASIQKLAAEGL
IQKGGGHKMAAGLSLSRAQLEPAMARLTELLAKQGAGTGGAGDLRLDGTLMPSAATPELI
EKIEAAGPYGAGAPAPRFALPALRIRHTRPVGENHLKLTLGDGGPVTLDAICFDAVRSGL
DALQAHNGRAVHVAGRVELNHWQGRTRVQLRLDDAAWAEN
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgagttacctcggggtggagacctccctgaccggacggcgctggatcggcccgtccgac
gaggtcgagcggctggcccagaccctgatgcaacgcgccgaggtggagcctgccgtcgcc
gccattctcgcgcgccggggcgtgcagccggaggaggtggtgggctttctcgcccctgcc
ctacgcgacctgctgcctgacccgatgaccctcaaggacatggagcctgccgccacccgc
cttgtcgccgccgcgcgaaagggtgagcgcatcgccatattcgccgactacgacgtcgac
ggtggcgcttctgccgctctgctgatctgctggctgcgcgccttgggccgcgaggccacg
ctctacattcccgaccgcatcgacgagggttacggccccaacgaagaggccatggcgatg
ctggcccgtgaccatgacctgatcatctgcgtcgattgcggcacgctttcccacggtccg
atcgccgccgccaagggtgccgacgtgatggtgctggatcaccacctcgccttggccgag
ctgcccgagtgcgtggccgtggtgaaccccaaccggcaggacgaggatggcagctgcggc
cacctctgcgccgccggcgtcgtctttctcgtgctggtggaggccaaccgccggatgcgg
gccgcgggtgagagcgggccggacctgatggggttcctcgacctcgtggcactggccacc
gtggccgacgtggccccgctggtgggcgtgaaccgcgcgctggtggttcagggactgaaa
gtcatggcgcggcgccagcgccccggcctcgtggcgctctgcgacgtgggccggctcgac
cgggcgccgacctcctatcacctcggcttcgtgctcgggccgcgcgtcaacgcgggcggg
cgcatcggcgcggccgacctcggcgcgcgctgcctctccaccgataacgcgggcgaggcc
ggcaagctcgccgcgcagctcgacagtctcaacaccgaccgccgcgacattgagcagcgg
gtccgcgaagcggccctcgcccaatgcgagacccgcggccttgacgcgccgctgatctgg
gccgccgaagacggctggcaccccggcgtcgtcggcatcgtcgcctcgcgcctgaaagac
cacagccgcaggcccgccatggtcatcggcttcgacggcgacgagggcaagggctcgggc
cgttccgtcgcgggcgtcgacctcggtgcctcgatccagaaactcgcagccgaggggctg
atccagaaaggcggcgggcacaagatggccgcgggcctctcgctcagccgtgcgcagctc
gagcccgccatggcccggctcaccgagcttctcgccaagcagggcgcgggcaccggcggc
gccggcgacctgcgcctcgacggcacgctgatgccctccgccgccacgcctgagctgatc
gagaagatcgaggccgcaggcccctacggcgccggcgcccccgccccgcgattcgccctg
cctgccctgcgcatccgccacacacggccggtgggcgagaaccacctcaaactcaccctc
ggtgatggtggcccggtcaccctcgacgcgatctgcttcgacgccgtgcgctccggcctc
gacgccttgcaggcacacaacggccgcgccgtccacgtggcgggacgcgtcgaactcaac
cattggcagggccgaacccgcgtccagctccgcctcgacgacgccgcctgggcagaaaat
tga
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