Gymnogyps californianus (California condor): 127012594
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Entry
127012594 CDS
T08687
Name
(RefSeq) deubiquitinating protein VCPIP1
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
gcl
Gymnogyps californianus (California condor)
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gcl01002
]
127012594
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gcl04121
]
127012594
Enzymes [BR:
gcl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
127012594
Peptidases and inhibitors [BR:
gcl01002
]
Cysteine peptidases
Family C64
127012594
Ubiquitin system [BR:
gcl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
127012594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
ubiquitin
Motif
Other DBs
NCBI-GeneID:
127012594
NCBI-ProteinID:
XP_050746755
LinkDB
All DBs
Position
2:37911850..37928542
Genome browser
AA seq
1221 aa
AA seq
DB search
MSQPQQQQQPPPPPPPSPQQQPQPPPPAASKKRDRRIFSGTCPDPKCQARLFFPAHGPQS
SGSIECTDCGQRHEQRQLLAVEEVTDPDLVLHNLLRNALLGVSGAGPPRRNTELVKVMGL
SNYHCKLLAPILARYGMDKQTGKAKLLTEMNQGDIFDCSLLGDRAFLIEPEHVETIGYGK
DRSGSLIYLHDTLEDIKKANNSQECLIPVHVDGDGHCLVHAVSRALVGRELFWHALRENL
KKHFEENLSHYKALFHDFIDAAEWEDIINECDPLFVPPEGVPMGLRNIHIFGLANVLHRP
IILLDSLSGMRSSGDYSATFLPGLIPLEKCMGKDGMLNKPICIAWSSSGRNHYIPLVGIK
GAALPKLPRKLLPKAWGVPQDLIKKYIKLEEDGGCVIGGDRSLQDKYLMRLVAAMEEVFM
SKHGIHPSLVADVHQYFYRRTGVIGVQPEEVTAAAKKAVMDNRLHRCLICGALSEHHVPP
EWLAPGGKLYNLAKSTHGQLRPDKNYSFPLNSLVCSYNPAKDVLVPDYSLSSLTACNWCH
GNLVRRVREDGSVLYLDGDRTNTRSTGGKCGCGFKHYWEGKEYDNLPEAFPITLEWGGRV
VRETVYWFQYESDTSLNSNVYDVAMKLVTKHFPGEFGSEILVQKVVNTILHQTAKKNPDD
YTPVNIDGAHAQRADDVQQGQELESQLPTKIILTGQKTKTLHKEELNMSKAERTIQQNIA
DQASVMQKRKSEKLKQEHKGQPRTASPGAVREGPSSAPATPTKTPYSPTSTKEKKIRITT
NDGRQSMLTLKCTTTFLELQESIAREFNIPPYLQCIRYGFPPKELLPPKEGMENEPVPLQ
HGDRIAIEILKGKEEGRQPASAHAAHAVKHEDVAVTSKISSKELQEQVDKEMYSLCLLAT
LMGEDVWSYAKGLPQLFQQGGVFYSIMKKTTGLADGKHCTFPHLPGKNFVYNAAEDRLEL
CVDAAGHFPIGPDVEELVKEALSQVRAEATSRSREASPSHGMLKLGSGGVVKKKSEQLHN
ITAFQGKGHSLGTASSSQQHDQRARETPLLRKHSTETDFSPSAKIEPSVFTAASGNSELI
RIAPGVVTMRDSRQLDPTLIEAQRKKLQEMVSSIQASMDRHLRDQNTEQSASVDLSQRKV
EAVSSTAKTESFQAGLPESFSAPGGTEHLNTESADGNMVNSVGTTFPARSKAQKGNSVEE
LEEMDSQDAGITNATEPMDHS
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagcctcagcagcagcaacagccgccgccgccgccgccgccgtctcctcagcag
cagccgcagccgccgcctccggccgcctccaagaagcgggaccggcgcatcttctcgggc
acctgccccgaccccaaatgccaggcgcggctcttcttcccggcccacgggccgcagagc
agcggcagcatcgagtgcacggactgcgggcagcgccacgagcagcggcagctgctggcc
gtggaggaggtgacggaccccgacctggtgctgcacaacctgctgcgaaacgcgctgctg
ggcgtcagcggtgccggcccgccccgcaggaacaccgagctagtcaaagtcatgggcctc
tccaactaccactgcaagctcctggcccccatcctggcccgctacggtatggataagcaa
actggcaaagccaagctcctcaccgagatgaaccagggagacatctttgactgctccctc
ttgggtgaccgcgccttcctcattgagccagagcacgttgaaaccatcggttatggaaag
gaccgctctggcagtctcatctacctgcacgacaccctggaagacatcaagaaggccaac
aacagtcaggagtgcctcattcctgtccacgtggatggagatggccactgccttgtccac
gcagtctcgcgggcacttgttggcagggaactgttctggcatgctctgcgagagaatcta
aagaagcattttgaggagaatctgagtcactacaaggcgctcttccatgactttattgat
gcagcagagtgggaggacattatcaacgaatgtgaccctttgtttgttcctccagaaggg
gtgccaatgggccttcggaatattcacatctttggtctggccaacgtgcttcaccggcct
atcattctgttagactccttgagtggaatgcgaagctctggagattattcagcaacgttc
ctccctggtctgatacccctagaaaaatgcatgggaaaagatggcatgttgaacaagcca
atctgcattgcatggagtagctcaggacgtaaccattatattcctctagttggaataaaa
ggtgctgctttacctaaactgcctaggaagctacttcctaaagcctggggagttcctcaa
gacctcatcaaaaagtacatcaagttagaggaggacggtggttgtgttattggaggagac
agaagtttgcaagataagtacttgatgaggctcgttgctgcaatggaggaggttttcatg
agtaaacacggtatccatcccagtcttgtagctgatgtacatcagtatttctacagaagg
actggtgtaataggagtccagcctgaagaagtcactgcagctgccaaaaaagcagtaatg
gacaaccgccttcacaggtgcctcatctgcggggccctttcagagcatcatgttcctccg
gagtggctggctcctggggggaaactatataacctggcaaaaagtacccatggccaacta
aggcctgacaaaaattacagttttcccctgaacagtttggtgtgttcttacaaccccgca
aaggatgtgctggtaccagactatagcctgagtagtttgactgcttgtaactggtgtcat
ggtaacttagtgcgtcgtgtcagagaagatggatctgttttgtatttggatggagacaga
actaatactaggtctacgggtggcaaatgtggctgtggattcaagcactactgggaaggt
aaagaatatgataatctccctgaagcttttcctattactctagagtggggtggaagagtg
gtgagagagacagtctactggttccagtatgaaagcgacacatctctgaacagcaatgtg
tatgacgttgccatgaaacttgttaccaagcacttccctggtgaattcggtagtgagatt
cttgttcagaaagttgtcaacacaatattgcatcaaactgccaaaaagaaccctgatgat
tatacccctgtaaatattgatggtgctcacgcccaaagagctgatgatgtacagcaagga
caagagttagagtcgcaacttccaaccaaaattattctgactggacagaagacaaaaact
ttgcacaaggaggagctgaatatgagcaaagctgaaagaactattcagcagaacattgca
gaccaggcttccgtaatgcaaaaacggaaaagtgaaaaattgaaacaagagcataaaggg
caacctaggactgcttctcctggggctgttcgtgaggggccatcatctgcacctgctaca
ccaacaaagaccccttattctccaacatctacaaaagaaaagaaaattcgaataaccaca
aatgatgggaggcagtcaatgctcaccctaaagtgcactaccaccttcttggaactacag
gaaagcatagcgagagaatttaatattcctccatatttgcaatgtattcgctatggcttt
cctcctaaagagcttctgcctcccaaagaaggcatggaaaatgagcccgttcctttgcag
catggtgacagaattgccatagaaatcctcaaaggtaaggaggaaggcaggcagcccgct
tcggcacacgcagcccatgctgtgaagcatgaagatgttgctgtgactagtaaaatctca
tcaaaggaactgcaagagcaagtcgataaggagatgtattctctctgtcttctagcaaca
ctaatgggagaagatgtttggtcttacgcaaaggggcttcctcagttgtttcagcagggt
ggagtattctacagcataatgaagaaaaccacaggtttggctgatggcaagcactgtact
tttccacatctgcctggtaaaaacttcgtgtacaatgcagcagaagacagattagagctg
tgtgtggatgctgctgggcacttccctattggtcctgatgttgaagagttggttaaagag
gccttaagtcaagtacgagcagaagctacttcaagaagcagggaagcaagtccttcacat
ggaatgctgaagctgggtagtggtggagtagtgaaaaagaaatctgaacaactacataac
ataactgcatttcaaggaaagggccactccctaggaactgcatctagtagtcaacaacat
gatcaaagagccagggaaacaccacttttaagaaagcatagcacagaaacggacttcagt
ccttctgctaaaattgagccttctgtattcacagctgcttctggtaacagtgagcttatc
cgaattgctccaggagttgtgacaatgagagacagcaggcagcttgaccccactttgatt
gaggcacagagaaaaaagttgcaggaaatggtctcttctattcaggcttcaatggataga
catttgcgggatcagaatacagagcagtcagcatcagttgatctatctcaaagaaaagta
gaggcagtgagttcaactgctaaaactgagagctttcaggcgggtttacccgaatcgttt
tctgcaccaggtggtactgaacacttgaataccgaatcagctgatggtaacatggtgaat
tctgtgggaacaacattccctgcaaggtctaaagcacaaaagggaaattctgttgaggag
cttgaggaaatggatagtcaagatgcaggaatcactaatgcaactgagccaatggatcac
tcttga
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