Gymnogyps californianus (California condor): 127012632
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Entry
127012632 CDS
T08687
Name
(RefSeq) SWI/SNF complex subunit SMARCC1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127012632
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gcl03021
]
127012632
03036 Chromosome and associated proteins [BR:
gcl03036
]
127012632
Transcription machinery [BR:
gcl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
127012632
Chromosome and associated proteins [BR:
gcl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
127012632
PBAF complex
127012632
GBAF(ncBAF) complex
127012632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
SWIRM-assoc_2
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
Chromo
BRCT_2
DUF919
SpeFL
Motif
Other DBs
NCBI-GeneID:
127012632
NCBI-ProteinID:
XP_050746819
LinkDB
All DBs
Position
2:complement(167313434..167403867)
Genome browser
AA seq
990 aa
AA seq
DB search
MDFKAGGTLCHILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNCLSRPT
IYLIPDIELKLANKLKDIVKRHQGTVTEEKSKATHHVYPSPTSMDDDEWLRPVMKKDKQV
LVHWGFFPDSYDTWVHANEIDAEIEDPPIPEKPWKVHAKWILDTDIFNEWMNEEDYEVDE
NRKSVSFRQRISMKNEEPVRSPERRDRKAAASTRKRKHSPSPPPTPVESRKKTGKKGQAA
LYGKRRGQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDE
QDEETVATGGKEDEDPNKGDQSRSIDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRA
LPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLE
QWGLINYQVDPESRPMAMGPPPTPHFNVLADTPSGLMPLHIRTPQVPAAQQMLSFPEKNK
EKPTDLQNFGLRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVG
SRTQDECILHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRV
ASAAAKAALEEFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEP
EKIDGAEEEKMETETDGQQSEKVENKAESEIEEGDKVQEGENERNPEKEQDSEVTADPKP
EEKEAEENKENVDASKDKENEAGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEER
KIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYA
ELRARQQMEQQHSQNPQQSHQHSSGPGMNPLGAPAHPGLLPHQQPPPYPMMHHQMPPPHP
PQPGQMPGPGSMIPGQPMPGRMMPSVSANIHPASSGPPPPGMSPMSGNLIGPRVPLAAPN
GMYPPPAQPPPPADGVTPPPAGAPPASAAP
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaaagctggaggtacattatgtcacattcttggtgctgcttacaaatataag
aatgaacagggctggcggaggtttgacctgcagaatccatcccgaatggatcgaaatgtg
gagatgttcatgaacattgagaaaacactagtgcagaacaattgtctcagcagaccgacc
atctacctcattccagatatagaattgaagttggctaataaattgaaggatattgtcaaa
cgtcaccagggaacagtaactgaagagaaatcaaaggctacccaccatgtttatccaagt
cctacctcaatggatgatgatgaatggttgagacctgtgatgaaaaaagacaagcaggtg
ctggtacactggggcttttttccagacagctatgatacttgggttcatgccaatgaaata
gatgctgaaattgaggatcctccaattcctgaaaagccatggaaggttcatgccaagtgg
attttggacacagatatattcaatgaatggatgaatgaagaggattatgaggtagatgag
aacaggaaatcagtgagttttcgacagagaatctccatgaaaaatgaagagcctgtacgt
agtccggagaggagagacaggaaagcagcagcaagtacaaggaagagaaagcattctcct
tctccacccccgactcctgtggagtcgagaaaaaagacagggaagaaaggacaagcagcc
ttatatgggaaaaggagagggcagaaagaagaagatgagcaagaagatcttacaaaggac
atggaggatcccacaccagtacctaatatagaagaagtggtacttcccaaaaatgtgaac
ccaaagaaagacagtgaaaacacgcctgtgaaaggaggaacagtagcagacctcgatgaa
caggatgaggagacagtggcaactggaggaaaggaagatgaagatcctaacaaaggcgat
caaagtcggtcaattgatccaggtgaagataatgtcacagaacaaaccaaccacatcatt
attccaagctatgcatcttggtttgactacaactgtattcatgtgattgaacgtcgtgct
cttcctgaattcttcaatggaaaaaacaagtccaagactccagaaatatacctggcttac
cgcaacttcatgattgacacctatcgcttaaaccctcaagagtacttgaccagcactgcc
tgcagaaggaatctgactggagacgtgtgtgctgtcatgagagtacatgcttttctggag
cagtggggtctcattaactaccaagtggatccagaaagccgtcccatggcaatgggccct
ccccctactcctcacttcaatgtgctggctgatacaccctctggacttatgccgctccat
atccgcactccgcaggttccagctgctcagcagatgttgagttttcctgagaaaaacaaa
gagaagcctactgatctgcagaactttggacttcgcacagacatttactcaaaaaagact
ttagcaaagagtaaaggtgcaagtgctggaagagaatggacagaacaagagacattgctg
ctattagaagctctggagatgtacaaagatgactggaacaaagtctcagagcatgttggg
agccgtacccaagatgagtgcattctccattttctgagacttccgatcgaagacccctat
ttggagaactctgatgcgtctctgggcccgctggcttaccagcccgtacctttcagccag
tctggcaatccagtcatgagtaccgttgcttttctggcgtcggtggtggatccccgggtg
gcatcagccgcagcaaaggctgcgttagaggaattttctcgagtcagagaggaggtaccg
ctggagcttgttgaagctcatgtaaagaaagtacaggaagcagcaagagcctctggaaag
gtggatccaacatacggattagagagcagctgcattgccggaacaggtccagatgagccg
gagaaaatcgatggagctgaagaagaaaagatggaaacagagacagatgggcaacagtct
gagaaggttgaaaacaaagcggagagtgaaattgaggaaggcgataaagtacaagaagga
gaaaatgagagaaatccagaaaaagagcaagatagtgaagtgactgcagaccccaagcca
gaagaaaaggaggcagaagagaacaaggagaacgttgatgcaagcaaagacaaagaaaac
gaggctgggaagaagaaagtggaacatgaaatctcggaaggaaacgtagctacagctgca
gctgctgcccttgcctcagctgccaccaaagcaaagcacctagcagcagtggaagaaaga
aagatcaagtccctggttgcccttttggtggaaacgcagatgaagaagctggagataaaa
cttcgccactttgaggagttggaaaccattatggacagagagaaagaggcattagagcag
cagagacaacagttgctgacagaacgccagaattttcacatggaacagctgaaatacgct
gaattaagggctcgtcagcaaatggagcagcagcacagtcaaaacccacagcagtctcac
cagcactccagtgggcctgggatgaacccccttggggcaccagcacatccaggcttactg
cctcatcagcagcccccaccgtaccctatgatgcaccaccaaatgccaccacctcacccg
ccacagccaggtcagatgccggggcccggttcgatgatacctggacagcccatgccaggc
cggatgatgccaagtgtgtcagccaacatccatccagccagcagtggtccccccccaccc
ggcatgtcaccaatgtcaggaaatctaattggacctcgcgttcctctcgcagctccaaat
ggcatgtatccccctcctgcacagccgcctccgccagcggacggggtgaccccacctccg
gcaggagccccgccagcatcggccgctccctaa
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