Gymnogyps californianus (California condor): 127012638
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Entry
127012638 CDS
T08687
Name
(RefSeq) laminin subunit alpha-1
KO
K05637
laminin, alpha 1/2
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl04510
Focal adhesion
gcl04512
ECM-receptor interaction
gcl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127012638
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127012638
09142 Cell motility
04820 Cytoskeleton in muscle cells
127012638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_B
Laminin_N
Laminin_I
Laminin_II
Laminin_G_3
3keto-disac_hyd
Hepar_II_III
FAS_I_H
Motif
Other DBs
NCBI-GeneID:
127012638
NCBI-ProteinID:
XP_050746827
LinkDB
All DBs
Position
2:complement(55130988..55257071)
Genome browser
AA seq
3107 aa
AA seq
DB search
MTAHSAAVEVSGSGGRRLLALLTAASLLWVPGQGQPRGLFPAILNLASNAHISTNATCGE
KGPEMFCKLVEHVPGRPLRNAQCRVCDHHSANPKEQHPISSAIDGTNNWWQSPSIQNGRQ
YHWVTITLDLRQVFQVAYVIIKAANAPRPGNWILERSIDGTEFRPWQYYAISDTECLTRY
NITPRIGPPTYKRDDEVICTSYYSRLVPLEHGEIHTSLINGRPSADDPSQKLLEFTSARY
IRLRLQRIRTLNADLMTLSHNDPKELDPIVTRRYYYSIKDISVGGMCICYGHARSCPLDE
ITKKLQCQCEHNTCGESCNKCCPGYHQKPWRPGTISAGNKCEKCNCHNKAEDCYYNQSIA
DQKRSMDIHGQYIGGGVCLNCTQHTTGINCEICADGYFRPHKISPYEDHPCYPCGCDPFG
ALSSDCVKDEHHSDSQRGTWPGQCQCREGYTGEKCDRCAFGYRGYPNCLRCNCSLTGSIN
EDPCTEPCLCKENVEGENCDLCKPGFYNLQERNPQGCTECFCFGVSDVCDSLTWPISQIS
DMTGWLVTDLYNARSVQPQRSQFDGPRQISINNTEAVKVLKHTYYWSAPETYLGNKLTAF
GGNLKYTVSYDIPMESVDSDIVSSVDVIIQGNGQILSTRAAGLSLQPYEEYSNAVRFVSE
NFIDFNTKKAIDREKLMTVLVNVTHLLIRANYNIAKKAVYRLDSVTLDTASANVIDLSSA
PDVEFCECPQGYTGISCESCLPGYYRVDGILFGGICQPCKCNGHATECDIHGVCFACQHD
TTGPFCDQCLPGFYGSPSQGTSEDCQPCACPLSSAANNFSPTCQLSEGGGIVCDKCLPGY
TGSQCERCANGYYGNPLMPGQSCAPCECNGNVNPQEDGHCDTFTGQCLKCLGNTAGRHCE
KCADGYYGDAVIEKSCRACACHVNGSLSSTCHHETGFCHCKSNVIGERCDKCLNGYYGLL
TGLGCIPCNCSQFGSVSEDCNHQGQCQCVPGVAGEKCDRCAHGFHAFQDGGCTPCDCAHT
QNNCNADSGQCICPPHTRGPKCELCEENHWGLSPKLGCKACNCSNTGSTNLQCDVLTGQC
QCKVEFGGQDCSRCALGYRDYPDCVACDCDLSGTKEEMCDDTEGLCGCEEETGICTCKEN
VFGLQCSECKPGTFALSANNALGCTLCFCFGMSTFCSELEDHVRIPITLTPDQSILHVVA
QSNLTGTVEGVFSQFPDVLLDAAIVRRYLNTETFYWRLPKQFQGDQLMAYGGKLTYTVAF
YALDGFGTSNFEPQILMKGGHTSKLVIYVDIPSPENGVRTDKEVEMKEDSWKYFNSVSDE
PVLRSDFMSVLSNVEYILIKAAYGQGLQQSRIANISMEIAVKFEEMHLGRARAHLVEQCR
CPAGYAGLSCQSCAPGYYRGKHTELSVKEPHTLVAPCVPCQCNNHSETCDPETGKCLNCR
DNTVGDYCSACAPGYYGKVIGSVNDCSLCACPRANPVSFSPTCVLKGVQDYHCDACLPGY
EGQYCERCSLGYYGDPQLPGGSCHPCQCNPSGSVHVNCDHATGQCLCKQGVTGQLCEECE
PRHLLVEDECVSCDDNCTGVLLSSLDNLNKAILSMNLTGVARVPYGILSELENATKHLKG
SIVPREVPTYSLATAKESLLSLSGGIDQLHEESSRFLKKAWQLNTMTQKTRNKSQELAGF
IDTVHTTIKVLAEVAMSLNETLGLDLPLSNATSQSLQDDISALLDALRKKDFVQQHHNGT
SVLKAAENLLIQFQKEYLKPQQELAELKKDASQLLSKHNSRLQDAQDLVNEALSNINETN
RLFPLISSNLAELNDKKLNIKEGEEVSTMLIKEGKVLVNAAAALAQDVKNSTSNLEVHQD
GLVLWSTKLRHHVDELVMQMSVRGVLDLVYKAEDHATQFQRLADALESGLSKVRNVTLNT
TAAVYTHSSVKSVIERTESLADDASRVVNGPLDLPEESLSLLGKETLLLSSKFQNEAKNL
KKKSDGLLFGLNGLNKKVEKIQESTNKIVNQLNDSLLTLRALPNDTRKYMLEVKELAVSA
NTSAVVGLSHFGDFSQKLLNTSSTLSRVNDTLRKTSELITDSSKAAITAEKQVKEVEAQA
SLLLDRLKPLKMLEENLNRNLSEIKELISQARKQAASIKVAVSADRDCIRAYQPQISSTN
YNTLTLNVKTAEPDNLLFYLGSNGKTDFLAVEMRRGKVALLWDLGSGSTRVEYPDFQIDN
NKWHRIHATRFGKTGTLNVEEMNSNQKLSSKSAASPGTASILDVNRSTLMFIGGLGGQIK
KSPAVKVTHFKGCIGEASLNGKSIGLWNYMEREGKCNGCFGSPQDEDTSFHFDGSGYSVV
EKALRSTVTQIIIFFSTFSPNGLLLYLASNGTRDFLSLELVDGKVRLTVDLGSGPLALTT
ENRYNNGTWYKISFSRNKKQGILAVMDAYNLNYKETKQGESPGVASDLNRSDKDPIFIGG
LPRSRTVRKSLNSRMYVGCIKNLEISRSTFDLLRNSYGVRKGCVLEPIRSVNILNNGYIE
LVPKSLSPESELMATFATKNSSGIILAGLSKGLEKRRRRQAHLPFFSIMLIDGHLAVHVN
AGDRASTRKVVLQSANGTYSDGQEHSVILIRNKRIITVQVDESNPAELRLGSSAEMSPMN
ISNFYAGGIPAGEGILGLKMAGSFHGCISNLIFNKELLYFTTSMKYEHVDMAGCFLSEKP
KSAVQPEDIEIQPELQALPAPLRPLTDTKKVVCAKDELPDHVQGAHQFGLAKGSHLTLLF
NQSTVRKKLSIQLNLRTFASSGLIYYVAHQNQVDYAALQLHGGQLYFSFDLGKGKAVAFH
PAVISDGKWHTIKTEFVKRKGIIIVDGQELVAVSALGDGSTLDVEGKLYVGGLPLDYVPK
NLGNVTHSIPACIGSMTINSKQLDNESPVSIFAVNKCYVTVQEGTFFDGSGFAALVREGY
KVRSDVNITLEFRTTAVHGVLLGVSSAKVDAIGLEIVNGKVLFHVNNGAGRITATYEPRG
TNSLCDGKWHKLQANKSKHRISLIIDGNLVQTDNPYIQSTSADTNNPIYVGGYPADVKQN
CLTSKSSFHGCLRNLVLTKGQQAELFDFSRAFDLRGVFPHSCPGAEH
NT seq
9324 nt
NT seq
+upstream
nt +downstream
nt
atgacggcacattcggcagccgtggaagtaagcggaagcggcgggcggcggctgctggcg
ctgctgacggcggcttcgctgctctgggtgccggggcagggccagccccgaggcctgttc
cccgccattttgaacctggccagcaacgctcacatctccaccaacgccacctgcggggag
aagggaccggagatgttctgcaaactggtggagcatgtcccgggacggcccctgcgcaat
gcccagtgccgtgtctgcgaccaccacagtgccaatcccaaagagcaacacccaatttcc
agtgcaatcgatggtaccaataactggtggcaaagtcccagcattcagaatgggaggcaa
taccactgggtcaccatcaccttggatttaaggcaggtctttcaagttgcatatgtcatc
atcaaagctgctaatgctccacgacctggaaactggattttggaacgctccatagatggc
acagagttcagaccatggcagtactatgcaattagtgataccgaatgtttaactcgttat
aatattacgccaagaattgggccgccaacttacaaaagagatgatgaagtgatctgcacc
tcctattattccagactagttcccctggaacatggagagattcacacgtcactgatcaac
ggtaggcctagcgctgatgatccttcacaaaagcttttggaatttacttctgcacgatac
attcgcctacgactgcagcgtattagaactcttaacgctgacctcatgactctcagccat
aatgatcctaaagaactagaccccattgttaccagaaggtactactattcaataaaggac
atctctgttggtggcatgtgtatttgttatggccatgctcgaagctgccctctggatgaa
atcacaaagaaattgcagtgccagtgtgaacacaacacgtgtggagagagctgtaacaag
tgctgtccgggctaccaccagaaaccgtggagaccaggaaccatttctgctgggaacaaa
tgtgagaagtgcaactgtcataacaaagcagaagattgttattacaatcagagtattgca
gatcagaaaaggagcatggatattcatggccagtatataggaggtggtgtgtgcttaaac
tgtactcaacatactactgggatcaactgtgaaatatgtgctgatggatattttagacca
cacaaaatttctccctatgaggatcacccctgctatccctgtggctgcgacccgttcggc
gctctgagttctgactgtgttaaagatgagcaccattctgactcacagcgtgggacttgg
ccaggtcagtgtcaatgcagagaaggttacacaggagaaaaatgtgatcgttgtgcattt
gggtatcggggctatccaaactgcctgcgttgtaactgcagcctgactggtagcattaat
gaagatccatgcacagaaccttgtctttgcaaagaaaacgtagaaggtgaaaactgtgat
ctctgtaaaccaggattctacaatttgcaagaaagaaatcctcagggctgcacagagtgt
ttctgctttggggtttctgatgtctgtgacagcctaacatggcccatcagtcagatatca
gacatgactggatggcttgttactgatctgtataatgcaaggagtgtgcaacctcagcga
agccaatttgatggaccccgtcaaataagtattaacaacactgaggctgtgaaagtactg
aaacatacttattactggtcagcacctgagacatatctaggaaataaactcacagctttt
ggcggaaacttgaagtatacggtatcttatgacattccaatggagagtgtggacagtgat
atagtatctagtgtggatgtcatcattcagggtaatgggcagattttgagtacaagagca
gcgggcttgtcactacagccatatgaggagtactctaatgcagtgagatttgtatcggag
aatttcatagacttcaatacaaaaaaagctatagaccgggaaaaattgatgactgttctg
gtaaatgttacccatcttctgatcagggccaactacaacattgccaaaaaagctgtgtac
aggctggactctgtgaccctggatactgcaagtgcaaatgttatagatctttcttcagca
ccagatgtggaattctgtgaatgtcctcaaggttacacaggaatatcatgtgagtcctgt
ctccctgggtactaccgtgtggatggaatactctttggaggtatttgtcaaccctgcaaa
tgcaatgggcatgcaactgagtgtgatattcatggtgtttgctttgcttgtcaacacgac
accacaggacctttctgtgatcagtgcttgcctggcttctatggaagtccatcccaagga
acttctgaggactgccagccctgtgcatgtcctctgagttctgctgcaaacaatttcagt
cctacttgccagctgagtgaaggaggtggaattgtctgtgacaaatgtcttccaggctat
actggttctcagtgtgaaaggtgtgctaatggttactatggaaatccactcatgcctgga
caatcgtgtgctccttgtgaatgtaatggcaatgtaaaccctcaagaagatggtcactgt
gataccttcacaggacaatgcctgaaatgtctggggaacacagcaggtcgccactgtgaa
aagtgtgctgatgggtattatggggatgcagtgattgagaaaagctgtcgtgcctgtgcg
tgccatgtgaatggttccctttcgagtacttgtcatcatgagacaggcttctgtcactgc
aaatcaaatgttattggagaaagatgtgataagtgcttgaatggttattatggcctgctt
actgggcttggctgcattccctgcaactgcagtcaatttggctcagtctccgaggactgc
aatcatcaggggcagtgtcagtgtgtaccaggagtggctggagaaaagtgtgatcgctgt
gctcatggctttcatgcattccaggatggtggctgcacaccctgtgactgtgctcatact
cagaacaactgtaacgctgattctggccaatgcatttgtcctcctcacactcggggacca
aaatgtgaactctgtgaagaaaatcactggggactctctcctaaacttggctgcaaggct
tgcaactgtagcaacactggttcaaccaatctccagtgtgatgtattgacgggtcaatgc
cagtgtaaagttgaatttggaggacaagactgttccaggtgtgcattaggctacagggac
tacccggactgtgttgcctgtgactgtgatttgagtggaaccaaagaggagatgtgtgat
gacactgaaggactttgtggttgtgaagaagaaactggcatctgtacctgcaaggaaaat
gtatttggtctacaatgcagtgagtgtaaacctggaacatttgctctgtctgctaacaat
gcactaggttgtactctgtgcttctgttttgggatgtccacattttgttcagaactagaa
gatcatgtgagaattcctataaccttaactccagatcagtccattctgcatgtcgtagct
caaagtaacctgactggaacagtggaaggtgtattttcgcaatttcccgatgttttactg
gatgctgccatagtcagaagatacttaaatacagaaacattttactggaggttaccaaag
cagtttcagggagaccaactcatggcctatggagggaagctgacatatactgttgctttt
tatgctttggatggctttggaacctcaaattttgagccacagattctaatgaaaggaggt
cacaccagcaagttggtcatctatgtagacatcccttctccagaaaatggagtaagaact
gacaaagaggtagaaatgaaggaggattcttggaagtattttaactctgtgtctgacgag
cctgtcttgcgttctgacttcatgtctgtgctaagcaatgttgaatacattcttatcaag
gcagcttatggccaaggattacagcaaagcagaattgcaaatatctcaatggaaattgca
gtgaagtttgaagaaatgcatctaggcagagctagagctcatcttgtagagcaatgtaga
tgtcctgctggttatgctggattgtcctgtcagagctgtgctccaggatactacagggga
aagcatacagaactcagtgtaaaagagcctcacactctggtagcaccttgtgtgccatgt
cagtgcaacaaccacagtgaaacctgtgatcctgaaactggaaagtgcttgaactgcaga
gataacacagttggtgattactgcagtgcttgtgccccgggctactatgggaaagtaatt
ggatctgtcaacgactgctctctttgtgcttgtcccagagccaaccctgttagttttagt
cccacttgtgtcctgaaaggtgttcaggattaccactgtgatgcttgtctcccaggatat
gaaggacagtactgtgaaaggtgctcccttggctattatggtgaccctcagcttcctggt
ggcagctgccatccatgtcagtgcaatccaagcggctctgttcatgttaactgtgatcat
gcaactggccagtgcctctgtaagcaaggtgtgacaggacagctctgtgaggagtgtgaa
ccgagacatcttctcgtggaagacgagtgtgtttcttgtgatgacaactgcacaggagtt
ttgttaagcagtttggataatctcaacaaggccatactttcaatgaacctcactggtgtt
gcccgtgtgccctatgggatattgtcagagttggagaatgcaacaaaacatctcaagggg
tctatagttcctagagaagttccaacttactcattagctacagcaaaagaaagtctcctg
agtttatcaggaggaattgatcagctgcatgaagagtcatctagatttttgaaaaaagct
tggcagcttaacacaatgactcagaaaaccaggaataaaagtcaagaactggctggattt
attgacacagtacatacaaccatcaaagtacttgctgaagttgctatgtcactaaatgaa
acactgggcctggatctgccgctgtcaaatgctacatctcagagtctgcaggatgatatt
tctgcccttttggatgcattgcgcaagaaagattttgttcaacagcaccataatggtacc
agtgtcctaaaagctgcagaaaatttgttgatccaatttcagaaagagtatcttaaaccc
cagcaggagcttgctgaactaaaaaaggatgcaagccagctcttatcaaagcacaacagc
agactgcaagatgctcaggacctggtgaatgaggcactctctaacatcaatgagaccaat
cgcttgtttcctcttatctctagcaacctggcagagttaaatgacaaaaagctaaatata
aaggaaggtgaagaagtctcgaccatgctcattaaagaagggaaggtcctagtgaacgct
gctgctgctcttgcccaagatgtaaagaactctacatctaacctggaggtccaccaggat
gggttagtcctatggagcaccaaactgcgacaccacgtggatgagctggtgatgcagatg
tctgtgagaggagtgcttgacctggtatacaaagccgaggaccatgccacccagttccaa
agacttgcagatgcactagagagtggcctctctaaagtaagaaatgtgactctgaacaca
accgctgctgtctacacccactccagcgttaaaagcgtgattgaaagaacagagagtttg
gcagatgatgcatctagagttgtgaatggccccttggatttaccagaggagtctctcagt
cttcttggaaaagaaactctactgcttagctccaaatttcagaatgaagctaaaaacctg
aagaaaaaaagtgatggccttttatttggattgaacgggttgaacaaaaaggtagaaaag
attcaggaaagtactaataaaattgtcaaccagcttaatgattccctgttgacactaaga
gcattgcctaatgatacaaggaaatacatgcttgaggtgaaagagctggctgtgtctgca
aacaccagtgctgtggtgggtttaagccactttggggatttcagtcaaaagctgctgaat
acttcttctacgttgtcccgagttaatgacacattgaggaaaactagtgaacttataact
gattcatcaaaagctgcaatcacagctgaaaaacaagttaaagaagttgaagcacaagca
agccttctattggataggctgaaacctttgaaaatgctagaggagaacctgaacagaaac
ttgtctgaaattaaagagctcatcagccaggcccgcaaacaggcagcatctattaaagtt
gcagtatcagcagacagagattgcattcgtgcctaccaaccccaaatttcatctacaaat
tacaacaccttaacactcaatgtgaaaactgctgaaccagataacctacttttctacctt
ggtagcaatggaaagacagacttccttgcggtagagatgcgacgtggtaaggtagctctt
ctttgggatttgggctctggatcaacaagagtggaataccctgattttcaaattgacaac
aacaaatggcacagaatacatgcaaccaggtttggaaaaacaggtacactcaacgtagag
gaaatgaactccaatcagaagctttcatctaaatctgcagcctctccagggacagccagc
atactggatgttaacagatcaaccctaatgtttattggaggacttggagggcaaatcaag
aaatcacctgctgttaaggtgacccattttaaagggtgcataggagaggcatccctgaat
ggcaaatctatcggtctttggaactacatggaaagagagggcaagtgcaatggctgtttt
ggaagcccacaggatgaggacacttctttccattttgatggcagtggatactcagttgtg
gagaaggcactccgctcaacagtgactcagataataatatttttcagtaccttttcacct
aatgggctgcttctgtatcttgcttcaaatggcactagagatttcttatcccttgagctt
gttgatggcaaagtgagactgactgttgatctaggttcaggacctcttgctcttacaaca
gaaaatcgttacaacaatggaacatggtataaaatttcattcagtcggaacaagaaacaa
ggaattttggcagtcatggatgcatataaccttaattataaagaaaccaagcaaggagaa
tctcctggggttgcctcagacctgaaccgctcagataaggacccaatcttcattggtggg
ctgccaagatcgaggactgtgaggaaaagtcttaatagtagaatgtatgtgggatgcatc
aagaatctggaaatatcccgttcaacctttgacttgcttagaaattcatatggagtgaga
aaaggctgtgtattggagcctattcgtagtgtgaacatcttgaacaatggatatattgag
ttggtacctaagtccttaagcccagaatcagaactgatggccacttttgctacaaagaac
agcagtggcatcatccttgctggactcagcaagggactggaaaagcgacgacgtagacaa
gcacatttgcccttcttttccatcatgctgattgatggtcatcttgcagtgcatgttaat
gctggagatagagcaagtactaggaaagtagttcttcagtccgctaatggaacatacagt
gatggacaagaacactctgtcatcctaatccggaataagaggatcataactgtacaagtg
gatgaaagtaaccctgcagaactgaggcttggttcatcagcagaaatgagccctatgaat
atttccaacttttatgctggtggcattccagccggagagggcatcttagggctaaaaatg
gctggctcctttcatggctgtatcagcaaccttatttttaacaaggagcttttgtatttc
accacttccatgaagtatgaacatgtggatatggccggctgctttttgtcagagaagcct
aaatcagccgtacagccagaagacattgagattcaacctgaacttcaggctttaccagct
cccctgaggcctcttacagatacaaaaaaagtagtttgtgcaaaagatgagctacctgat
catgttcaaggtgcccatcagtttggacttgccaaaggcagccacctgacactgctcttc
aatcagtctactgtcaggaagaaactttccattcagctgaatctcagaacctttgcctcc
agtggcctgatttactacgtggctcaccagaaccaggttgattatgcagcactacagctt
catgggggacagctctatttctcatttgatctaggcaaaggaaaagcagtagcttttcac
cctgctgttatcagtgatggaaaatggcatacgataaagacagaattcgttaaaagaaaa
ggtataatcattgtggacggacaggaattggtagcagtcagtgctctgggagatggtagc
actctggatgtggaggggaagctctacgtgggaggactgcccttagactatgtgccgaag
aatcttgggaatgtgactcacagtattcctgcctgcattggtagcatgacaattaatagc
aaacaactggacaacgagagccctgtctctatctttgctgtgaataaatgctatgtaaca
gtgcaggaaggtactttctttgatggaagtggctttgctgctcttgtcagagaaggttac
aaagtccgatctgatgtgaacatcacactggagtttcgtacgacagcggtgcatggcgtt
ctccttggggtcagcagtgctaaggttgatgccattggactggagattgtaaatggcaag
gttttattccatgtcaacaatggagctggcagaataacagcaacatatgaaccaagaggc
acaaatagtttgtgtgatggaaaatggcacaagcttcaagcaaacaaaagcaaacatcgc
atttcactgataattgatgggaatttggttcaaactgataatccctacatccagtcaacc
tctgcagatacgaacaatcccatttatgttggaggctatcctgctgacgtgaagcaaaac
tgcctcacgagcaagagctcattccatggctgtttgaggaacctcgtgttgacgaagggc
caacaggcagaattatttgacttcagcagagcttttgacctgcgtggagtctttcctcat
tcctgccctggggctgaacactga
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integrated database retrieval system
