Gymnogyps californianus (California condor): 127013232
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Entry
127013232 CDS
T08687
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
127013232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gcl03019
]
127013232
03009 Ribosome biogenesis [BR:
gcl03009
]
127013232
03036 Chromosome and associated proteins [BR:
gcl03036
]
127013232
Enzymes [BR:
gcl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
127013232
Messenger RNA biogenesis [BR:
gcl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
127013232
Ribosome biogenesis [BR:
gcl03009
]
Eukaryotic type
90S particles
RNase
127013232
Prokaryotic type
rRNA processing factors
127013232
Chromosome and associated proteins [BR:
gcl03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
127013232
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
DSRM_MRPL44
YcaO
Cro
5_3_exonuc
Motif
Other DBs
NCBI-GeneID:
127013232
NCBI-ProteinID:
XP_050747928
LinkDB
All DBs
Position
2:complement(89726575..89799399)
Genome browser
AA seq
1333 aa
AA seq
DB search
MSFHSGRGCPRGQGGPGARTSTQTYRPQNLRQLHPQQPSVQYQYDQQTAPPTTYSNPPTT
GYMPPRPDFVPYPPPVPPSTQNPISQCPMRPPFPNHQMRQSFPVPPCFPPAPPPVPNPSN
TPMPGTPAGQSTFPYMMPPPTVPHPPPPPVIPQQVSYQPVYSAGYSQQSFPLPNFNSYQH
NSGSFQSSTANSSGGSSHFRHTSQYQGEKSQSDRRSPDRSKHYDEHRHREHGHIHGDRHR
SANHGDRRDRGRSPDRRRQESSRHRTDYDRGRVSPHHRSYERNSRERHRHRDSRRSPSPD
RSYKKDYKRAGSRSPSRERKRPRWEEDRERWSENQSSSKEKNYTAIKDKESEENASEKNE
EEDEELLKPVWVRCTHSESYYSNDPMDQVGDSTVVGTSKLRDLYEKFDEELGKRQAKAKA
ARPPWEPPKTKLDEDLESSSDSDCDSEDDSSCSSSSDSDVFDVIAEIKRKKAHPDRLHEE
LWYNDPGQMNDGPLCKCSAKARRTGIRHGIYPGEEPIKPCRPMTNNAGRLYHYRITVSPP
TNFLTDRPTVIEYDDHEYIFEGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMPENFC
VRGLELFSSYLFKDILELYDWNLKGPSLENDSICCPRFHFMPRFVRFLPDGGKEVLSMHQ
ILLYLLRCNKALVPEEEIANMLQWEELEWQKYAEECKGMIVTSPGMKPSSVRIDQLDREQ
FNPDVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQADKQKLSQR
EEALQKIRQKNTMRREVTVELSSQGFWKTGIRSDVCQHAMMLPVLTHHVRYHQCLMHLDK
LIGYTFRDRCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMHMRKKG
INTLINIMSRLGQDDPAPSRINHNERLEFLGDAVVEFLTSVHLYYLFPTLEEGGLATYRT
AIVQNQHLAMLAKKLELDRFMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLEEAK
QLFGRLLFNDKDLRDVWLNYPLHPLQLQESNTDRQLIETSPVLQKLTEFEEAIGVIFTHV
RLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSL
VNNRTQAKVAEELGMQEFAITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVHTFM
NVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVA
VYFKGERIGCGKGPSIQQAEMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRWEREH
QEREPDETEEARK
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccattccgggcgaggatgtccccgtggtcaagggggaccaggagcaagaact
tcaacacagacgtaccgccctcagaacctacggcagcttcacccacaacagccctctgta
caataccagtatgaccagcaaactgcccctccaacaacctattcaaaccctccaaccact
ggttacatgcctcccaggccagactttgtgccctatcctcctccagtgcccccttccacg
caaaatcccatcagccagtgtcccatgaggccaccatttccaaaccaccagatgaggcag
agcttcccggtgcctccgtgcttccctcctgctcctccaccagtgccaaatcctagcaac
actcccatgccaggaactcctgctgggcaaagcacctttccttacatgatgcctcctccc
acggtgccgcatcccccgcccccgccagtcatcccacagcaagtcagctaccagcctgtg
tactcagcagggtattcacagcaatcgttcccgctacctaacttcaatagctatcagcac
aactctggctcctttcagagcagcactgccaacagcagtggcggcagcagccattttcgg
cacacgagtcagtaccagggagagaagtcgcaaagtgatcggcggtctccagacaggagc
aagcactacgatgagcaccgacatcgtgaacacggtcacatccacggtgacaggcatcgg
tccgctaaccatggggatcgtcgggatcgaggccggagtccagataggaggaggcaggaa
agcagtcggcaccggacagattatgacagaggaagggtatcgcctcatcacagaagttac
gagcgtaacagtagggagaggcataggcaccgtgacagcagaagatcaccatcaccagac
agatcttacaaaaaagattacaagagagcaggaagccggtctccaagcagagagagaaag
agaccccgatgggaagaggacagagaaaggtggtctgagaaccagagctccagcaaagag
aaaaattacaccgctatcaaagacaaagaatcagaggagaatgcatctgaaaaaaatgaa
gaggaagatgaggaattacttaagccagtctgggttcgctgtacccattctgaaagctat
tattccaatgaccctatggatcaagtgggggactctactgtggtaggaacaagcaagctc
cgagatttgtatgaaaagtttgacgaggagttaggaaagcgacaggccaaggccaaagca
gccaggccaccgtgggagccaccaaagaccaagctggatgaagatttagagagctccagt
gactcagactgtgactctgaagatgacagcagctgctctagcagttcagattcggatgtt
tttgacgtcattgcagaaattaagcgtaaaaaagcacaccctgatcgtctccatgaagaa
ctgtggtacaatgatccaggacagatgaatgatggacctttgtgcaagtgcagtgctaaa
gcccgacgaacgggaataagacatggcatttatcctggcgaagagcccattaaaccatgt
cgccccatgaccaacaatgctggaagactataccactatcgaattactgtgtcgcctccc
acaaacttcttaacagacagacctactgttattgagtatgatgaccatgaatatatcttt
gaagggttctcaatgtttgcacatgccccactaacaaacattcctctatgtaaagtaatc
agatttaacattgactatacaattcatttcattgaggagatgatgcctgagaatttttgt
gtgagaggtcttgagctgttctcttcatatctatttaaagatattttggagctctatgac
tggaatcttaaaggtccttcacttgaaaatgattctatttgctgccctagatttcacttc
atgccgcgatttgtgagatttcttccagatggaggaaaagaagtactctcaatgcatcag
attcttctctacttgttacgatgcaataaagctctggtgcctgaagaggagattgccaac
atgcttcagtgggaagaactagaatggcagaaatatgcagaagaatgcaaagggatgatt
gttaccagccctggcatgaaacccagctcagttcgtattgatcaactggaccgtgaacag
ttcaatcctgatgtaattactttccccattattgtccactttgggatacgacctgctcaa
ctcagttatgctggagatcctcaataccaaaagctgtggaagagttacgtgaagctgcgt
cacctgttggctaatagtcccaaagtcaaacaggctgacaagcagaaattatcacaaaga
gaggaagcactgcagaaaattcgtcagaagaacacaatgagacgtgaagtgaccgtcgag
ttgagtagccaggggttctggaaaacagggatacgctctgacgtctgccagcacgcaatg
atgcttcctgtcctcacccaccatgtccgctaccatcagtgtctgatgcatttggacaaa
ttgataggctacacttttcgagacaggtgcttgctacagcttgccatgactcatcccagc
catcacttaaactttggaatgaatccggatcatgccagaaattccttatccaactgtggc
attcgacagccaaagtatggagatagaaaagttcaccatatgcacatgagaaaaaaaggg
ataaacaccctgataaatattatgtcccgtttgggacaggatgatccagctccttccagg
attaaccacaatgagcgtttagaatttctgggagatgctgtggtggagttcttaacaagt
gtccacttgtattacctgtttcccactctggaggaaggaggattagctacgtaccgcact
gccatcgtacagaaccaacacctggccatgttggctaagaagctggaactagatcgattt
atgctttacgctcatggtccagacctttgcagggaatcggatctccgccatgccatggcc
aactgctttgaagccctaataggagctgtttatctagaagggagcctagaagaagcaaaa
caattatttggacgtttactcttcaatgacaaggacctgcgggatgtatggcttaattat
ccactacacccactccaactgcaggagtccaatactgacaggcaactcattgagacctct
ccagttcttcaaaagcttacagagtttgaggaggcaattggagtcatctttactcatgtt
cggcttctagcacgtgcgtttactctgaggacagtaggctttaaccatctgactctaggc
cacaaccagaggatggaattcctgggtgactccataatgcagttggtagccacagagtat
ttattcatacattttcccgatcatcatgaagggcacttaacgctgttgagaagttctttg
gtgaacaacaggacacaggccaaggtggcagaagagctgggtatgcaagaatttgccatc
actaatgacaagacaaaaagacctgtagctcttcgaactaagactttggctgatctcttg
gaatcttttattgctgccctgtacattgataaagatttggaatacgttcacactttcatg
aacgtgtgcttttttccacggctaaaggagtttattttgaatcaagattggaatgatcct
aaatctcagcttcagcagtgctgcttgactctcaggacagaaggaaaagagccagacatt
cctctttacaagactttgcagacagtgggaccatctcatgccaggacatacacagtagct
gtttacttcaaaggggaaagaataggatgcggtaaaggcccaagtattcagcaagcggaa
atgggagctgcaatggacgcacttgaaaaatataacttcccccagatggcccatcagaaa
cggttcattgaacgaaagtacagacaagagttgaaagaaatgaggtgggaaagagagcac
caagagagagagccagatgagactgaagaagcaaggaaataa
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integrated database retrieval system
