Gymnogyps californianus (California condor): 127013266
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Entry
127013266 CDS
T08687
Name
(RefSeq) DNA topoisomerase 2-binding protein 1 isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127013266
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gcl03032
]
127013266
03400 DNA repair and recombination proteins [BR:
gcl03400
]
127013266
DNA replication proteins [BR:
gcl03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
127013266
DNA repair and recombination proteins [BR:
gcl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
127013266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
127013266
NCBI-ProteinID:
XP_050747993
LinkDB
All DBs
Position
2:119430187..119455913
Genome browser
AA seq
1516 aa
AA seq
DB search
MKGSKEPFFVKFVKSSGNSEYFFKALESIKEFQSEEHLQILEEKTALNIKENDKSLYICD
PFRGIVFSHLKKLGCRIVGPQVVLYCMQSQRCVPRAEYPVYNMTMADVTVSCTSLEKDVR
EEVHKYVQIMGGRVYRDLNVSVTHLIAGEVGSKKYLVAASLKKPILLPSWVKTLWDKSQQ
SIMRYTDVNMEDYACPVFLGCTICVTGLSSSDRKEVQRLTAEHGGQYTGQLKMNECTHLI
VQEPKGQKYECAKKWNVHCVSVQWFSDSIEKGFCQDEKMYKIEAGSKLSNTPSTSTPTNH
ASKPDNHTLSDVSHISNINLSGVNETACSSAMSSRLDPLPDELENLDISSFQPSEDLLDG
CRVYLCGFSGRKLDKLRRLINCGGGVRFNQLNEDVTHVILGENNDELKHFLDKTAHRPHV
VTAKWLLESFSKGYLHPVEQYIPLNYQLLENPILEQPGMKSMLPKNKCLLKKEAVNVIKH
QKAAEDDFLSQYVNNDSTLVEKLTSRTFNDVTHLTVQGENQSSVCNGSLGESSALAEGGL
FVRKRFLLLGFDEEDESCIADIIKENAGKILPLQSRTIADYAVVPLLGCTVKPTVGDVVT
NTWLITCVEQQLLLDPQSNPLFTPVPVTEGVTPLEDCVLSFSQFTGAERDSLVYLAGLLG
ARVQEFFVRKANAKKGMFASTHLVVREPDGSKYEAAKKWNLPAVTVAWLLQSARTGKRAD
ESKFLVENAEAEDKESSITQLSKTAATVKSPDSEQPTYLLEAGKKTAVTPLDINRFQSKA
FQAVISHHIGKTTPLAQGGLPQKEPSLHLDTPSKFLSKDKLFKPSFDVKDALAALETPGG
PDQKTRKLSTPLSEVISRNLKLALANSTRHTVALTASPQLSTAQPEVEEEPKPLADVVIY
VSKKLSKKQSELNAVAASLGADYRWCFDETVTHFIYKGGQNDNNKEYKSVKERGIHIVSE
HWLLESAQEYKRLPESLFPHTYNPKMSLDISAVQDVKLSSSSKLSTGKPAEENEIIPVDE
DDAEDDVTTDQIKETDTTGEEQILTSESKGVLTQALEMRENFQRQLQEIMSATSLVKPQG
QRGSLSRNSFDGSPTTPDSTRSVRNGRSRVLEALRQSRQALADINTEPSQSEQIIWDDPT
AREERARLVSNFQWPNSPSQYTEQGQNNASKNMNESAFKGSLADAEIAGIAVPEAGDGDL
IEGLKNPVCRDPETPIKDHLIPTPQAPSIAFPLANPPVAPQPKEKAVTEDEKADEEPEKH
RKFQLSSLNPQERFDYCHLIEELGGIVLEKQCFDPSCTHIVVGHPLRNEKFLASMAAGKW
VLHRSYLEACRGAGCFVQEEDYEWGSNSILNVLPGINVNQKKLALAAMRWRKKIHKGRQE
TGIVEGAFSGWKVILNVDQSKEAGFRRLLQSGGAKVFSGHSVILFKEATHLFADFSKLKP
DDARVNVAEAAAQGVNCLKPEYIADYLIQDPPPPMESYCLPEAESYLQNNTELGTGLSQK
RRALGEMSRVKRSRIH
NT seq
4551 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtagtaaggagccattttttgtgaaattcgtaaagtcttctgggaactcggag
tatttttttaaagctcttgagtctataaaagaatttcagtcagaagaacatctccagatc
cttgaagaaaaaacagcactcaatataaaagaaaatgataaatcgctttacatttgtgat
ccttttagaggcattgttttcagtcatctcaaaaagcttggttgtagaattgttggacca
caggtagtcctgtactgtatgcagtcccagcgatgtgtcccaagagctgagtatcctgtg
tacaatatgaccatggccgatgtaacagtatcctgtaccagccttgaaaaagatgttagg
gaagaagttcataaatacgtgcagataatgggtggacgtgtgtacagagacctcaatgtg
tcagtaactcatcttatagctggagaagttggcagcaagaaatacttagtagctgcttct
ctgaaaaaacctattttgcttccctcttgggttaagacactgtgggataagtctcagcaa
agcataatgagatacactgatgttaacatggaagactacgcttgtcctgtgttccttggc
tgtacaatttgcgtaactggcttaagtagttcagacaggaaagaagttcagcgcctcact
gctgaacacggtgggcaatatacggggcagctcaagatgaatgaatgtactcacctcata
gttcaagagccaaaaggtcagaagtatgaatgtgccaaaaagtggaatgtgcactgtgtg
tctgtgcagtggttttctgacagcattgagaaaggcttctgtcaggatgagaaaatgtat
aaaatagaggctggatcaaaactgagtaatacacccagtacgtcaacacctacgaatcat
gccagcaagcctgataatcataccctttcggacgtcagccacatttccaatatcaatttg
agtggtgttaatgaaactgcatgtagttctgctatgagcagcagactggatcctcttcct
gatgagctggaaaacttggatataagttcttttcagccctctgaagatttgttagatggg
tgtcgagtctatctgtgtggcttcagtggcaggaagttggacaagttgagaaggcttatt
aattgcggtggtggtgttcgatttaatcaacttaatgaagacgttacccatgtcattttg
ggggaaaataatgatgagctgaaacacttcttggacaagacagctcacaggcctcatgta
gtgacagcaaaatggttgctggagtcatttagtaaaggttatctacatccagtggagcaa
tatatccctctaaactaccagctgttagagaacccaattttggagcaacctggaatgaag
tcaatgcttcctaaaaataagtgtctcttgaagaaagaagctgtgaacgttataaagcat
cagaaagctgctgaagatgacttcctctctcaatatgtaaataatgattctacattagtt
gaaaaactaacatccagaaccttcaatgatgttactcacttgactgttcaaggagagaat
caatcttctgtctgtaatggttctttgggagagtcttctgcactggctgaaggaggctta
tttgtcagaaagagatttcttcttttaggttttgatgaagaggacgagtcctgcattgca
gatattataaaggagaatgctgggaaaattctgccgctgcaaagcagaaccattgcagac
tatgctgtggtacctttattggggtgcacagtgaagccgactgttggtgatgttgtcaca
aatacatggctgataacatgtgtggaacagcagctccttttagatccccagtccaatcca
cttttcacaccagttccagtgacggaaggagttacccctctggaagattgtgttctttct
tttagccagttcactggtgcagagagagactccctggtttatctggcaggactgctagga
gccagagtccaagaattctttgtgcggaaagccaatgcaaaaaagggaatgtttgccagt
acccatcttgtggtgagagaaccggatggttccaagtatgaagctgcgaagaagtggaat
ttgccggcagtcactgtagcttggcttttgcagtctgcaaggacaggaaagagagcagat
gaaagcaagttcttggttgaaaatgcagaggctgaagataaggagagttccattactcag
cttagcaagacagcagcaactgttaaatctcctgattcagaacaacctacttacctcctt
gaagctggaaaaaaaacagctgtgacccctcttgatatcaacaggttccagagtaaagct
ttccaagctgtaatctctcatcatattgggaagacaacccctcttgcacaagggggactg
ccacagaaagaaccgtctttacatcttgatacaccgtcaaaatttctttccaaagacaag
ttattcaagccctcctttgatgtgaaggatgctctggcagctttggaaactccaggaggt
cctgatcaaaaaaccaggaaactgagcacgcctctctctgaagtcatcagcagaaacttg
aaattggcactggcaaacagcacgaggcatacagtagctcttactgccagccctcagttg
agcactgcacagccagaagtggaagaagagcccaagcctctagccgatgttgttatatat
gttagtaaaaaacttagtaagaagcaaagtgaactgaatgcagtagcagcttctcttggg
gcagactacagatggtgctttgacgaaacagtaacacacttcatctataagggaggacaa
aatgacaacaataaggagtacaaatctgttaaagaacggggtatacatattgtttcagaa
cactggcttttagagagtgcccaagaatataaacggcttcctgaatctctctttcctcac
acttataatcccaaaatgagcctggacatcagtgcagttcaagatgtcaagctctcctcc
tctagtaaactgtcaactggaaaaccagcagaggaaaatgagattattccagtggatgaa
gatgatgctgaagatgatgtaacgactgaccaaataaaggaaacggacactacaggggaa
gaacaaattctaacaagtgaatccaaaggagttttaacccaagcactagaaatgagggag
aacttccaaaggcagctgcaggagatcatgtctgccacatcgctagtgaaaccacaaggg
caaagaggatccctttcaaggaacagttttgatggttctccaaccactcctgatagcaca
cggtctgtgcgaaatggccgcagtagggtcttggaagctctaaggcaatcccgtcaggca
ctcgcagatataaacacagagccatcccagagtgagcagatcatctgggacgatcctact
gcaagagaagagagagcaagacttgtcagcaactttcagtggcctaatagtccttcccag
tacactgagcaaggtcagaataatgccagcaagaacatgaatgagtctgccttcaaagga
tctttagctgatgcagagattgctggtatagctgttcctgaggctggggatggagatttg
attgaaggtctaaagaatcctgtatgtagagatcctgaaacaccgattaaagatcacttg
atccccactccgcaggcccccagcattgctttcccattggctaaccctcctgtggcacca
cagcccaaagaaaaggctgttacagaagatgagaaggctgatgaagaaccagaaaaacac
cgtaaatttcagctgtcttctcttaatcctcaagaaagatttgattactgccatctgatt
gaggaattaggtggaatagtacttgagaaacagtgctttgatccaagttgcacacacatt
gttgtgggacatcctcttcgaaatgaaaaattcttggcttcgatggcagctggaaagtgg
gtgcttcatcgttcctacctggaggcatgtagaggagctggctgctttgttcaggaagaa
gattacgagtggggaagtaattccatacttaatgttttgcctggaatcaatgtaaaccag
aagaaactagcacttgcagccatgaggtggaggaaaaaaattcataaagggaggcaagaa
actggtattgttgagggagctttcagtggctggaaagtgatcctgaatgttgatcaaagc
aaggaagcgggattcaggcgccttcttcagtcaggaggagcaaaagtgttttctggtcat
tctgtgattctcttcaaagaagcgactcatctctttgctgacttcagtaagctgaagccg
gacgacgccagggttaatgtagcagaggcggcagcccaaggagtgaactgcctgaaaccg
gagtacatcgctgactacctcatccaggatccacctcccccaatggagtcttactgcctg
ccggaagctgaatcttaccttcagaataacacagaacttggaactggattatcccagaaa
agaagagcgctgggagaaatgagcagagtcaagcgatccagaatacactga
DBGET
integrated database retrieval system
