Gymnogyps californianus (California condor): 127013566
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Entry
127013566 CDS
T08687
Name
(RefSeq) LOW QUALITY PROTEIN: sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
127013566
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gcl01002
]
127013566
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
gcl00536
]
127013566
Peptidases and inhibitors [BR:
gcl01002
]
Cysteine peptidases
Family C46: hedgehog family
127013566
Glycosaminoglycan binding proteins [BR:
gcl00536
]
Heparan sulfate / Heparin
Morphogens
127013566
BRITE hierarchy
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GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
127013566
NCBI-ProteinID:
XP_050748451
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Position
2:158709503..158719225
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AA seq
425 aa
AA seq
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MDEMLLLTRILLVGFICALLVSSGLTCGPGRGIGKRRHPKKLTPLAYKQFIPNVAEKTLG
ASGRYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQW
PGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYES
KAHIHCSVKAENSVAAKSGGCFPGSATVHLEQGGTKLVKDLSPGDRVLVADAEGRLLYSD
FLAFLDREDGSHKLFYVIETRQPRARLLLTAAHLLFVAPQHNQSQAGTPSSRALFASRVR
PGQRVYVLGEGGRQLLPAAVHSVSLREEASGAYAPLTAQGTILINRVLASCYAVIEEHSW
AHWAFAPFRLLQGMLAALCPSGGGPRWVPPPXPGIHWYSRLLYRIGSWVLDSDSLHPLGM
VVPSS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaatgctgctgttgacaagaattctcttggtgggcttcatctgcgctctttta
gtctcctctgggctgacttgtggaccaggcaggggcattggaaaaaggagacaccccaaa
aagctgacccctttagcctataagcagtttattcccaatgtggcagagaagaccctaggg
gccagtggaagatatgaagggaagatcacaagaaactccgagagatttaaagaactaacc
ccaaattacaaccctgacattatttttaaggatgaagagaacacgggagctgacagactg
atgactcagcgctgcaaggacaagctgaacgccctggcgatctcggtgatgaaccagtgg
cccggggtgaagctgcgggtgaccgagggctgggacgaggacggccaccattccgaggag
tccctgcactacgagggccgcgccgtggacatcaccacctcggaccgggaccgcagcaag
tacggcatgctggcccgcctggccgtcgaggccggcttcgactgggtctactacgagtcc
aaggcgcacatccactgctccgtcaaagcagaaaactcagtggcggccaaatccgggggc
tgcttccccggctcggccacagtgcacctggagcaaggcggcaccaagctggtgaaggac
ctgagccccggggaccgggtgctggtggccgacgcggagggccgtctgctctacagcgac
ttcctcgccttcctcgaccgggaggacggctcccacaagctcttctatgtcatcgagacg
cggcagccccgggcccggctgttgctgacggctgcccacctcctctttgtggccccccaa
cacaaccagtcgcaggcggggacccccagcagccgggcgctcttcgccagccgcgtacgg
ccgggccaacgggtctacgtgttgggcgagggcgggcggcagctcctgccagcggccgtg
cacagcgtctcgctgcgggaggaggcttcgggggcgtacgccccgctcaccgcccagggc
accatcctcatcaaccgggtgctggcctcctgctacgccgtcatcgaggagcacagctgg
gcgcactgggcgttcgctcccttccgcctgctccaggggatgctggctgccctctgcccc
tccggcggggggccccgatgggtgcccccaccgnctcctggcatccactggtactctcgc
ctcctctaccgcatcggcagctgggtgctggatagtgactctctgcacccgctgggcatg
gtggtgccgtccagctga
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