Gymnogyps californianus (California condor): 127013825
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Entry
127013825 CDS
T08687
Name
(RefSeq) mRNA-decapping enzyme 1B isoform X1
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127013825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gcl03019
]
127013825
Messenger RNA biogenesis [BR:
gcl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127013825
mRNA degradation factors
5'-3' decay
Decapping complex
127013825
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
127013825
NCBI-ProteinID:
XP_050748823
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All DBs
Position
1:150098577..150145980
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AA seq
607 aa
AA seq
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MAAAVAGAALLGKGLDISLAALQQHDPYISSIVDVASQVALYTFGHRANEWEKTDVEGTL
FVYTRSASPRHGFTIMNRLSMENRTEPITKDLDFQLQDPFLLYRNARLSIYGIWFYDKEE
CQRIAELMKNLTQQEQFKAQQGTGTGVSPMIMNSSNNKEVDILRMLTKAKDEYTKCKTCS
EPKQITSSSAIYNNPNLIKPIPVKPSENQHQRISQQSKNVDPEPQHLSLTALFGKQEKPD
VSEPLNKQHQENLPVRQGVVRSLSYEEPSRHSPSAEKQLCPAIQKLMVRGTDLHPLAEFP
ENRLCENGSIHPVGETFTGLFQPVTSHGIATSHVVQDTAGTQSLLQKLQSQSGSVTKMDP
SATGSVNSTASVFSRTPAAVGAPAATVTSMSQPPLVYFNGSLPGQALESQTLGKEQSKLP
RQPLSLSGNQAANSGVISPQELLKKLQIVQQEQQLHVSSRPTLAAKFPVVTQNTNTLKPL
DSWIEKAPGTEKQSTLLQVISPQRIPATVTPTLLMSPMVFTQSTPALPKANESGRLAAAN
QEPAASSASLLLPLQTPEPSVVNSSSMTKMQLQETLLHLIQNDDNFLNIIYEAYLFSVRK
AAMKKSL
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggtggccggggccgccctgctgggcaaggggctggacatcagcctggcg
gcgctgcagcagcacgacccctacatcagcagcatcgtggacgtggccagccaggtggcg
ctctacaccttcgggcaccgcgccaacgagtgggagaagactgacgtggagggaacacta
tttgtttacacaagatcggcttctccaaggcatggtttcacaattatgaacagactgagc
atggaaaatcgaacagaacctattactaaagaccttgatttccagctgcaggaccctttt
ctactgtacagaaatgccagattgtccatatatgggatttggttttatgataaggaagaa
tgccaaagaattgcagagctcatgaaaaacttaactcagcaggaacaattcaaagcacag
cagggcacgggaacaggagtgtccccaatgatcatgaattcttctaataacaaagaagtg
gatatcttacggatgcttaccaaggccaaagatgagtataccaagtgtaagacctgctca
gagccaaaacaaataaccagttcctctgcaatctataacaaccccaacctaatcaaacca
attccagtgaagcctagtgaaaatcagcatcaacgaatatctcagcaaagcaagaatgtg
gatcctgaaccacagcacttgtctttgacagcactgtttggaaaacaagaaaagccagat
gtctcagaaccacttaataaacagcatcaggagaatcttcctgttaggcagggtgtggta
cgttcactgtcctacgaagaacctagcaggcattcgccctctgcagagaaacagctttgc
cccgccattcagaagcttatggtgcgtgggacagaccttcacccacttgctgagtttcct
gagaaccgactctgtgaaaatggcagtatccaccctgtgggtgagactttcacaggactc
ttccaacctgtgacttctcatggtattgcaacatctcatgtagttcaggatactgctggc
actcagagcttattacagaaattacagagtcagtcagggtcagtgactaaaatggacccc
agtgcaacaggatctgtgaactcgacagcttctgtgttcagcaggactcctgctgctgtt
ggagcaccagcagcaacagtaactagcatgagccagccacctttggtatatttcaatggt
tccctaccaggccaggctttagagtctcagacacttggtaaagaacaatccaaacttcct
agacagccgctttctctctctggcaatcaagcagccaattctggggtgatttcgcctcaa
gagttactgaaaaaactccagatagtgcaacaagagcaacagttgcatgtatccagcaga
ccaaccttggcagctaagtttcctgttgttactcagaataccaatacactgaaaccactg
gattcctggatagaaaaggcaccgggtacagaaaaacagagcactctccttcaggtaatc
tcacctcaacgcattcctgccactgtgactcctaccttgttgatgtccccaatggtgttc
actcagtccactcctgctctaccaaaagcaaatgaaagtgggcggttagcagcagcaaac
caagaacctgctgctagctcagctagccttctcctgcccctgcaaaccccagagccatct
gtggtcaacagcagctcaatgacgaagatgcagctgcaggaaacacttctacacctgatc
cagaatgatgacaacttcttaaatattatttatgaagcatatctcttcagtgtgagaaag
gcagcaatgaaaaagtctctgtga
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