Gymnogyps californianus (California condor): 127013846
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Entry
127013846 CDS
T08687
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127013846
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gcl01009
]
127013846
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gcl04131
]
127013846
03029 Mitochondrial biogenesis [BR:
gcl03029
]
127013846
Protein phosphatases and associated proteins [BR:
gcl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127013846
Membrane trafficking [BR:
gcl04131
]
Autophagy
Autophagosome formation proteins
ULK complex
127013846
Mitochondrial biogenesis [BR:
gcl03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
127013846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
127013846
NCBI-ProteinID:
XP_050748845
LinkDB
All DBs
Position
2:43701949..43782050
Genome browser
AA seq
1598 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQNVADLKHAIQTKYKIAIQHQVLVVNGGECMAPDRRVC
SYSAGTDTNPIFLFNKEMILCERPPAIPKTTFSAENEMELKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTYSYQKLLFKFENVYSSYLQ
SIDDIKLKLTNLGSAVSMMAKIPLLECLTRHSYRECLGRLDSSAEHGGAESEETEDGKSA
ELVLYSDIAKVNNKSMLASFCKSVERSASEGTDPENVKDDKESGQNATVQDNETSVELKD
DDQPSFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIQPFLAECRQTIAKLDNQN
MKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQKRAENLKDPSVLPDLCLSHAN
QLMIMLNNHRKLLDIKQKCTTAKQELANNLQVRLKWCCFVMLHADQDGEKLQALLRLVTE
LLERVKVVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALIKDGKHLYEAEKAKRESF
GKLFRKSFLRNRLFRGLDSWPPSFCTRKPRRFDSELPDISLNDLQFLQSFCPSEVQPLLR
VPILCDFEPLHQHVRALHNLVKAAQSLDEMSQTITDLLNEQKASNSQASPQSATTPRMES
ATGTAVATSSRTPPSLSLQGPLCPPVCPPAPLEELSPDSIDAHTFDFETIAHPNLEQALK
QGSLDLDSLAESPESDFMSAVNEFVIEENPVSPNVISDPQSPEMMVESLYSSVINAIDSR
RMQDTNSCVKDVSVENASLNVCMEKCRVIAQDSKVHLRGIKEDLCHFRTLVQREQCDFSN
SLKCTSLEIVNTIEKVKLSLEKTLKDKHQKELQSLKSDYETKINKLLEDGEENKNKIKKL
KGDLLGLEEVLQNKNDEFAMVKNEKEAVVFLQNEKDQKLLELECQMETQNCEIKELRQSR
EVVLEDLKKLHVENNEKLQLLRAELESLEQSHLKELENKLEARHLQEFEKVLAEHKDCLD
KLKKENQHRLEQMQESHAVVVQEKQQQVEELQLKLSDLSDLRCKLEVELALKEAETDEMK
LLLEESRNQQQETLKSQIDKETESLKKEIDKLNNKIQINSDEYQVGLSELRTLMTIEKDQ
CISELVNRYEEESSLLRTELNKVTLLHQKTSEAEKRLSEQITELQSKLELEANALEKEKT
EKLSLCEQQEKYEAIIHKLKEEKELLVSNQEQDRQLLIQKLNCEKEDAVQTACKEFELQR
EAAEKGLLEKIQQLEMQVNQSPPTESSAESSLVAELQEKLQEEKMKFLEQLEEQEKRKNE
EMQNIRTSLTAEQQTNFNTVLAREKMKKESIINDLSDKLKMLVQQQEKDKDLIETLSEDR
ARLLEEKKKLEEEVNKLRSSSFSPSAYSAAASEACGACAADIPTDTDRLVSDVAAEGRMD
STMETSMMAVHENVHMSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKI
AIRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLAALDLKPGECASGASRRPWVL
GKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4797 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatatgtatttctggtcaacactggaactacccttacctttgatacggaactt
gctgtacaaaatgtggctgatctgaaacatgcaattcaaacaaagtataagattgccatt
cagcaccaagtactggttgtcaatggaggggagtgtatggcaccagacagaagagtgtgt
agttacagtgctggaacagataccaacccaatttttttattcaacaaagaaatgatcttg
tgtgaacgtccaccagctatccccaaaaccacgttttcagcagagaatgagatggaattg
aaagtagaagaatctctcatgatgcctgcagtgtttcatacagtagcatcacggacacaa
cttgctgtggaaatgtatgaggttgccaagaaactttgctccttttgtgaaggtcttgta
catgatgaacatcttcagcatcaaggctgggctgccataatggccaacttggaagattgt
acatactcttaccaaaagctgcttttcaagtttgaaaatgtatattcaagctatttgcag
tccatagatgatatcaagttgaaacttacaaacttgggttctgctgtttctatgatggcc
aagataccactgctggagtgcctaacgagacatagttacagggagtgtttaggaagactg
gattcttcagctgagcatggaggggcagaaagtgaagaaactgaggatgggaaatctgct
gaattggtgctttattctgatatagctaaagtgaacaataaatcaatgttagcctcattt
tgcaagtcagttgaacgttcagcttcggaaggcacagatcctgaaaatgtaaaagatgat
aaggaatctggtcaaaatgctactgtccaggacaatgaaacatcagtagaattgaaagat
gatgatcagccttccttcaatgtatctttgttagactggataaatgttcaagatagacct
aatgatgttgaatcgctggtcagaaaatgttttgattctatgagcaggcttgatccaagg
atcatccaaccctttctggcagaatgtcgccaaactatcgccaaactagataatcagaac
atgaaggctattaaaggccttgaggataggctctatgcattggaccagatgatagcaagc
tgcagcagactggtgaatgaacaaaaagaacttgctcagggatttttggctaatcagaag
agagctgagaacttgaaagatccttctgtgctgcctgatttgtgtttgagtcatgcaaat
cagctgatgattatgttaaataatcacagaaaactgttagatattaaacagaaatgtacc
actgccaaacaggagcttgcaaataatctacaagtcagactgaagtggtgttgttttgta
atgcttcatgctgaccaagatggagagaaactacaagccttgcttcgtcttgtaacagag
ctcctagaaagggtcaaggttgtagaggctctcagtactgttcctcaaatgtactgtcta
gctgttgttgaggttgtgaggagaaaaatgttcataaaacactacagggagtgggcaggt
gctttaataaaagatgggaaacacctgtatgaagctgaaaaggcaaaaagggaatctttt
ggtaaactattcaggaagtcttttctaaggaatcgtttgttcagaggacttgactcctgg
cctccatctttttgtacacgaaagcctcgcagatttgacagtgagcttccagatatctca
ttaaatgacttgcagtttttgcagtctttttgtccttcggaagtacagccgttactcagg
gttcccatactttgtgactttgaacctcttcaccagcatgtacgtgctctacataacctg
gtaaaggcagcacagagtttggatgaaatgtcacaaaccattacagacctgctgaatgaa
caaaaggcctccaatagtcaagcatcgccacaatctgctaccacgccaaggatggaaagt
gcaacaggaaccgcagttgctacctcttcaagaactcctccatcactcagtcttcagggt
cccctgtgtcctcctgtatgtcccccagctccactagaagaattgtctccagacagcatt
gatgctcatacatttgattttgaaactattgcccatccgaacttggagcaagctcttaag
caaggatcgttagacttggattcattagcagaaagtccagaatctgactttatgtcagca
gtaaatgaatttgtaatagaagaaaatccagtatctcctaatgtaataagtgatccacaa
agtccagaaatgatggtggaatctctttattcttcagttatcaatgcaatagacagtaga
cgtatgcaagatacaaattcttgcgtaaaggacgtttcagtagaaaatgcatctctcaat
gtttgcatggagaagtgcagggttattgctcaagactcaaaagtacatttaagaggtata
aaagaagatctttgccactttagaacacttgtacaaagagaacagtgtgatttttctaat
tctttaaaatgcacttcgttagaaatagtaaatactattgagaaggtaaaactttcactt
gaaaaaacactaaaagataaacatcaaaaagaattacagtctttgaaaagtgactatgaa
actaaaattaataagttattggaggatggtgaagaaaataaaaataagattaaaaagtta
aaaggtgacttattaggccttgaggaagttcttcagaataagaatgatgaatttgcaatg
gtgaaaaatgagaaagaagctgtagttttccttcagaacgaaaaagaccagaaattactt
gaattggaatgccaaatggagacacaaaattgtgaaattaaggaactgagacagtcacgt
gaggtagtacttgaagacttgaaaaaacttcatgttgaaaacaatgaaaaactacaactc
ctgagggcagaactcgagagtttagagcaaagccatttaaaagaactggaaaacaaacta
gaagccaggcatttacaggaatttgagaaggtgctagctgagcacaaggactgtttagat
aaattaaaaaaagagaaccagcatagacttgaacaaatgcaggagtcccatgcagtagtt
gtgcaagagaaacaacaacaagtagaagagttacagctcaagctttcagatttgtctgat
ttgaggtgcaaattagaagttgaacttgccttgaaagaggcagaaactgatgaaatgaag
cttcttttggaagaaagcagaaaccagcaacaagagaccttaaaatctcagattgataag
gaaactgaaagcttaaaaaaggagatagataaattaaacaataaaatacaaattaacagt
gatgaatatcaagtgggcttatcggaactaaggactctgatgacaattgagaaagatcag
tgcatttctgagctagtaaacagatatgaagaagaatcaagtttgcttagaactgaacta
aataaagtaacacttcttcatcaaaaaacttctgaggcagaaaaaagactttcagagcaa
ataacggaactacaaagtaagttagaattggaagcgaatgccctagaaaaggaaaaaaca
gaaaaattgtctctctgtgagcagcaggaaaaatatgaagctattatccataagcttaag
gaagagaaagaactgttagtatctaaccaagaacaagacaggcagttgctcattcagaag
ctcaattgtgaaaaagaggatgcagtacaaactgcttgtaaagagtttgaattacagagg
gaagctgctgaaaaagggcttttggaaaaaatacaacaacttgagatgcaagtaaatcag
agtcctcccactgaatcatctgctgaatcaagcttggttgctgaacttcaagagaagctt
caggaagaaaaaatgaagttcttagagcaacttgaagaacaagagaaaagaaagaatgaa
gaaatgcagaacatcagaacatcgctcactgcagaacagcagaccaactttaacactgtt
ctggcaagagagaagatgaaaaaagaaagcataattaatgatcttagtgacaaattaaaa
atgcttgtacaacagcaagaaaaagataaggatttgattgaaacactttctgaagatcga
gctcgcttacttgaagagaagaagaagcttgaagaagaagtaaataaactgagaagtagt
agtttttctccgtcagcctactcagcagcagcttcagaagcttgtggagcctgcgcagcc
gatattcccactgacacagacagattggtttctgacgttgcagctgaagggaggatggac
tccacgatggaaaccagtatgatggctgtgcatgaaaatgtccatatgtctgaagaaaaa
cagaggataatgttgttagaaagaactttgcagttgaaagaagaggaaaataagagatta
aatcaaagattgatgtcccagagcatgtcatcagtatcctcaagacattctgaaaaaata
gcaattagagattttcaggttggcgatttggttctcattatcttggatgaaaggcatgac
aactatgtgttgtttactgttagtccaaccttgtatttcttgcactcagaatctcttgct
gcactggatctcaaaccaggtgagtgtgcttcaggtgcatctaggagaccttgggtgcta
ggaaaagtgatggaaaaggaatattgccaggcaaaaaaggcacaaaacagatttaaagtt
cctttgggtacaaaattctacagagtgaaagcagtaccatggaacaagaaagtataa
DBGET
integrated database retrieval system
