Gymnogyps californianus (California condor): 127013971
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Entry
127013971 CDS
T08687
Name
(RefSeq) LOW QUALITY PROTEIN: SR-related and CTD-associated factor 8
KO
K13191
RNA-binding protein 16
Organism
gcl
Gymnogyps californianus (California condor)
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gcl03021
]
127013971
03041 Spliceosome [BR:
gcl03041
]
127013971
Transcription machinery [BR:
gcl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
127013971
Spliceosome [BR:
gcl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
127013971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
127013971
NCBI-ProteinID:
XP_050748911
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All DBs
Position
3:58261897..58324101
Genome browser
AA seq
1282 aa
AA seq
DB search
MEAVKAFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN
NVFKSEIIQPLLDMAAGIPPPVVTPVLPSTTAAMSNNTPGTPVTPVTPANVVQSLPDPWV
SQIANTDTLAAVAQILQSPQGQQLQQLIQTLQIQQQKPQPSLLQALDAGLVVQLQALTAQ
LTAAAAAANTLNPLEQSVSFNKKLMDRFDFGEESEQNEEPKKETPASQLPLVPESVNNSL
FHQLAEQLQQQNLEHLRQQLLEQQQPQKASPEENQEGNFGSEHSASPSQGSSQQQFLEVE
TNVDDSMDIQQQDMDIDEGQDVAEEEIFEQEEKKSAVRSRSRTRSRSRSRSPRKRRSRSR
SGSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTL
WVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAYRALQKLSSGSYKI
GSKIIKIAWALNKGVKTEYKQFWDVDLGVSYIPWEKVKLDDLEGFAEGGMIDQETVNTEW
ETARSSEAAKENPQTTQSAAVDKSTVITTQTEAYTQPVTMLQIPVAPAVPAVSLVPPAFP
VTMSVPPPGYSAIPPPPFLRASFNPSQPPPGYMPPPSTCVPPPVVPPPVVPPVVPTPLVQ
PPLPIAQETMKDVPFPSLVLPVGTVTSNLATPTLSAGSVFNPLPINKPESDEKGSHLTDL
QISSSENNRSVQLPTVSSSSSLAGGVQPTSVSSSSGLMAGVQPPNVSSSSGLLAGVHPPS
VSSSPGLLTGMQPPNVSSSSGVLAAVQPPSVSSNSGLLIMPPPNVSSSSGLMGVPPPNIS
SSSGLLAMQHPPGVQNMPHLNISSQRMPGIPLIDIRPGLMPHSPGPRFPLMQPGMPPQRS
IPPPAILDPSLHPPPRGPFPPGDIFNQTERPFGTPGRQNIDSISNPEKRLPLGGDNIQQE
GDRDYRFPPVENRDNLNRPSPVDVRDSVGRPPVDPREGIGRPPVDGREHFARPHVDMREN
FGRPGLDNLGRREHFGFNSDKHWGQRGDYDEREHHAFPIYGGPKGFHEDRERFRHVNYRF
DSRSGPSWNRGFEQDAHRDFDDRRRPWERQRDRDDRDFNFCREINGNRFGRDRMSNNWIP
PPHPRVFEYFDGATSQRKADNMPQVNGENTETESQPPTAQVQDDPELYEKLTSSVEINKE
KSDTEADIESEPVVESTETEGT
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtgaaagcctttaacagcgagttgtactcactaaatgattataagccaccc
atttctaaagctaaaatgacacagatcaccaaggcagcaatcaaggctataaagttctac
aagcacgttgtacagagtgttgagaaattcattcaaaagtgcaaaccagaatacaaagta
cctggtctgtatgtcattgactccattgtaagacagtcccggcatcagtttgggcaagaa
aaggatgtatttgctccaagattcagcaataacatcatcagcactttccagaacttgtac
cgttgtcctggggatgacaagagtaaaattgttagagtgctaaatttatggcagaagaat
aatgtgttcaagagtgaaattattcagcctctcttggatatggcagcaggaattcctcct
ccagttgtgacccctgtcttgcccagcactacagctgctatgagcaacaatacaccagga
acacctgtgactccagttactccagccaacgtggtgcagagtttacctgatccttgggta
tctcagattgctaatacagatacgcttgctgctgttgcacagattttacagagtcctcaa
ggccaacagcttcagcagttgatacagacactgcagatacagcagcagaaacctcagcct
tcactacttcaagccctggatgctggtcttgttgttcagttacaggccctcacagcacaa
cttacagctgcagctgctgctgctaacacacttaatccactggaacagagtgtctctttt
aataagaagctgatggacaggtttgactttggggaagaatctgaacaaaacgaagagcct
aaaaaggaaactcccgcttcccaactgcctttagtaccagaatctgtgaacaactcactt
tttcaccaactagctgaacagctacagcaacaaaatttagaacatctcagacaacagctt
ctggagcaacagcagcctcaaaaggcaagccctgaggagaatcaagaaggaaattttggt
tcagagcactctgcctcaccatcgcaagggagtagtcagcagcagtttttagaagtggaa
acaaatgtagatgattcaatggatattcaacaacaggacatggatatagatgaaggacag
gatgttgctgaagaagagatttttgaacaagaagaaaagaaatcagctgttcgttcaaga
tcaagaactcgttcaagatctcgttcaaggtcaccaagaaaacgaaggtctagatcacgg
tctggttctcgtaagcgtaaacacagaaaacgttcacgctcaagatcaagagaaaggaag
agaaagtcgtctcggtcatattccagcgaaagaagggccagggaaagggaaaaagaacgt
cagaaaaagggattgcctcctatacggtcaaaaacactaagtgtttgcagtactactctt
tgggtaggtcaagtagacaagaaggctacacagcaagatttaactaacttgtttgaagaa
tttggacaaatagagtcaattaatatgattcccccaagaggttgtgcctatgtctgtatg
gttcatagacaagatgcatatcgtgctcttcagaaacttagttctgggtcctataaaatt
ggatctaaaattattaagattgcgtgggctttgaataaaggtgtgaaaacagaatacaag
caattctgggatgtggatctgggagtttcatatattccttgggagaaagtaaaattggat
gatttggagggctttgctgaaggtggcatgattgaccaggaaacagtaaatacagaatgg
gaaacagctagaagctcagaagctgctaaagaaaatcctcaaactacgcagagtgctgca
gttgataagagtacagttattacaacgcagacagaagcttacacgcaaccagtcactatg
ctgcagattccagtagctccagctgtgccagctgttagcttggttccacccgcgtttcct
gtcacaatgtctgtccctcctcctggttatagcgcaattcctcctccacccttcttgcga
gcaagcttcaacccttcacagccacctccaggttatatgcctcctccatccacctgtgtc
ccaccacctgttgtcccaccacctgttgtcccaccagtagttccaacacctttagtacag
cctccattaccaattgcacaagagacgatgaaggatgttccttttcctagccttgttcta
ccagttggcacagttactagcaatctagctactccaactttatctgctggaagcgttttt
aatcctctgccaatcaacaaaccagaatcagatgaaaagggatcacatcttacagacctt
cagatttcttccagtgaaaacaatagatctgtgcagctacctactgtctccagtagctct
tctcttgctggcggagttcagccaactagcgtctcaagtagctctggacttatggctgga
gtgcaaccaccaaatgtctcaagtagctcagggcttctagctggagtgcatccacccagt
gtctcaagcagccctggccttctgacaggaatgcagccacccaatgtctcaagcagctca
ggagtactggcagcagtacagccaccgagtgtctcgagcaactctgggcttctcataatg
ccaccacccaatgtttcaagtagttctggacttatgggagtgccaccaccaaatatttca
agtagttctggacttctggcaatgcagcatccacctggggttcaaaacatgcctcactta
aatattagtagtcaaaggatgccgggaatacctctcatagatatccgtccaggcctaatg
ccccattcacctggaccaaggtttccattaatgcagccaggaatgccaccgcagcgtagt
attcctcctccagcaatccttgatccatctcttcacccaccacctcgaggtccttttcct
ccaggagatatttttaatcaaacagaaagaccttttggaacaccaggaagacaaaatatc
gatagcatttctaatccagagaaaagactaccacttggaggtgataacattcagcaggaa
ggagacagagattatcgctttcctccagtggaaaaccgagataatcttaaccgaccatct
ccagtggatgtcagagattctgttggacgaccaccagttgacccaagagagggtatagga
aggcctccagtagatggaagagaacactttgcgagaccacatgtagacatgagagaaaat
tttggaagaccaggtctagataatcttggtcgaagagagcattttggtttcaattcagac
aagcactggggacagagaggagattatgatgaaagagagcaccatgctttccctatttat
ggtggccctaaaggcttccatgaagacagagagaggtttcggcatgtaaactataggttt
gatagtagaagtggtcccagttggaatagaggatttgaacaagatgctcacagagatttt
gatgaccgcagaagaccctgggaaagacagagggatagggatgacagagattttaatttt
tgcagagaaattaatgggaacaggtttggaagagacagaatgtcaaacaactggatcccc
cctccacatccacgggtttttgaatattttgatggggccacttcgcaacgcaaagccgat
aatatgccccaggtaaatggtgaaaatacagagacagaaagtcagccaccaactgcacag
gtgcaggacgatccagaactttatgaaaaactgacatcttccgtcgagataaacaaagag
aagagtgacacagaagctgatatagaaagtgaaccagtggtagaaagcacagaaactgag
gggacataa
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