Gymnogyps californianus (California condor): 127014037
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Entry
127014037 CDS
T08687
Name
(RefSeq) syndecan-1
KO
K06257
syndecan 1
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl04512
ECM-receptor interaction
gcl04514
Cell adhesion molecule (CAM) interaction
gcl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127014037
04514 Cell adhesion molecule (CAM) interaction
127014037
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
127014037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gcl04131
]
127014037
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
gcl04090
]
127014037
00535 Proteoglycans [BR:
gcl00535
]
127014037
Membrane trafficking [BR:
gcl04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
127014037
CD molecules [BR:
gcl04090
]
Proteins
127014037
Proteoglycans [BR:
gcl00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
127014037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
127014037
NCBI-ProteinID:
XP_050749017
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All DBs
Position
3:complement(117183986..117209773)
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AA seq
309 aa
AA seq
DB search
MINVVAVWLVALCFQAAVPQTTNLNLPPEDLDSSGDDNDAFSGSGAGPLTDQSRTWRIPG
EPTNSSLLATPMDFNEQAFPGTESRTEKEVISPSATSNVVTEEPVVAVKDEVPIMGSPDE
KPTNDAVTTTVRSPTTHFPSVVHVTPSEASGTVHELKPKIPSSDVPDTKDVPEPHSTIHH
EGDITATLTTTAPKDIVPTHEEVSEDGSGDPGDFILTKDEDLVPTQNSEVPADSGRNAKA
AGASGIMDRKEVLGGVIAGGLVGLVFAVFLVAFMLYRMKKKDEGSYSLDEPKQSNGGYQK
PHKQEEFYA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgataaacgtggtggccgtgtggctggtagccctttgcttccaggctgctgtcccgcaa
actacaaatctgaaccttcctcctgaagatcttgattcatctggtgatgacaatgatgca
ttctcaggttcaggtgcaggtcccctgactgaccagtctcgcacctggagaatcccagga
gaaccgactaattcctcattactggcaacaccaatggatttcaacgaacaggcatttccc
gggactgagagccgaactgaaaaggaagtaatatctccttctgcaactagtaatgtagtg
acagaggagccagttgtagctgtgaaggacgaagtacccattatgggctcacctgatgag
aaaccaacaaatgatgcagttacaacaacagtgagaagccccactactcactttccttca
gtggttcatgtaactccttcagaagcctcaggcacagtccatgagctcaaacctaaaatc
cctagctctgatgtgccagacactaaggacgtgcctgagccccactctaccatccatcat
gagggagacatcactgccaccctcacgacgacagctccaaaggacattgttcctacacat
gaggaggtttctgaagacggctctggagacccgggagacttcatcttgactaaagatgag
gatttggtccccacccagaactcagaagtgccagctgactctgggaggaatgccaaagca
gcaggagcctcaggaattatggacagaaaagaagttcttggaggtgttattgctggagga
ttagtaggcttggtgtttgcagtgtttctagttgcatttatgctgtacagaatgaagaaa
aaagacgaaggcagctattcactagatgaaccaaaacagtctaacggaggataccaaaaa
ccacacaaacaagaagaattctatgcataa
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