Gymnogyps californianus (California condor): 127014434
Help
Entry
127014434 CDS
T08687
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
gcl
Gymnogyps californianus (California condor)
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gcl03041
]
127014434
03016 Transfer RNA biogenesis [BR:
gcl03016
]
127014434
Enzymes [BR:
gcl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127014434
Spliceosome [BR:
gcl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
127014434
Transfer RNA biogenesis [BR:
gcl03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
127014434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
127014434
NCBI-ProteinID:
XP_050749779
LinkDB
All DBs
Position
3:114308185..114332177
Genome browser
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQMEGKKGKATIKTGGAVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRATRGVTKGKYYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD
SYGEEFTMHDTIGCYLDIDKGQIKFSKNGKDLGLAFEIPPHIRNQALFAACVLKNAELKF
NFGEEDFKFPPKDGYIGLCKAPDGSVVKSQHSGNAQVVQTQNLPNAPKALIVEPSRELAE
QTLNNVKQFKKYVDNPKLRELLIIGGVAARDQLSILEQGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLLQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPETVHHVVVPVNPKADKLWERLGKNHIRTDEVHAKDNTRPGAN
TPEMWSEAIKILKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEQYFIQQGGGPDRKGHQF
SCVCLHGDRKPQERKQNLERFKRGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVAKEKEKVWYHVCSSRGKGCYNTRLKEEGGCTIWYNEMQLLG
EIEEHLNCTIAQVEPDIKVPVDDFDGKVTYGQKRALGGGLYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttttcggaaatgggtgttatgcccgagatagctcaagcagtggaggagatg
gactggcttcttcctacagatatccaagcagaatccatcccactgatcctgggaggtggt
gatgtgcttatggctgctgaaacagggagtggaaaaactggtgcttttagcattccagtt
atccagattgtttatgagacgctgaaggaccagatggaaggcaagaaagggaaagcaact
attaaaaccggtggggcagtgctcaataaatggcaaatgaacccgtatgatagaggatca
gcttttgcaattggatcagatggtttgtgttgtcaaagcagagaggtaaaagaatggcat
ggatgcagagcaactagaggcgtgactaaagggaaatactactatgaagtttcctgtcat
gaccaaggcttgtgcagagttggttggtcaactatgcaggcttcactagatttgggcact
gataaatttggctttggctttggtggcactggtaagaaatctcacaacaagcaatttgac
agctatggtgaggaattcactatgcatgatacaattgggtgttatctagacatagataaa
ggacaaataaaattttccaaaaatgggaaggaccttggccttgcgtttgagatcccacca
cacataaggaaccaagcactttttgcagcttgtgtactgaagaatgctgaattgaaattc
aattttggtgaagaagatttcaagtttccaccaaaagacggctatattggtctttgtaag
gctcccgatggtagtgttgtaaaatcacaacactcaggaaatgcacaagtggttcaaaca
cagaaccttccaaatgctccaaaagcattgattgtagaaccttcaagagagctggcagaa
caaactttgaacaatgtgaagcagttcaaaaaatatgtcgataatcccaaattaagggaa
ctgttgattattggtggcgttgctgcaagagatcaactctccatactggaacaaggagtg
gatattgttgttggaactcctggaagactggatgacctggtctcaacgggaaagcttaat
ttatctcaagttagattcctggttctggatgaagctgatggccttctcctccaaggttat
tcagatttcataaacaggatccacagtcaaattcctcagataacttcagatggaaagaga
cttcaggtgatagtgtgctctgcaacactacattcttttgatgtgaaaaaactatctgaa
aagatcatgcattttcccacatgggttgatttgaaaggagaagattctgtccctgaaact
gtacaccatgtagttgtgcctgtaaatccaaaagctgacaaactctgggaaaggcttggc
aagaatcatatcagaactgatgaagtacatgcaaaagacaatacacgacctggcgctaac
actccagaaatgtggtctgaagctattaaaattctaaaaggagaatacaccgttcgggca
atcaaagaacacaagatggaccaagccattattttctgcaggactaaaatagattgtgat
aatatggagcagtacttcatccaacagggcggaggccctgataggaagggacatcagttc
tcatgtgtctgtctgcacggtgacagaaaacctcaagaaagaaagcaaaacctggaaaga
tttaagagaggagatgtccgtttcttgatctgcacagatgttgctgctagaggaattgat
attcatggtgttccatatgttatcaacgtcacactccctgatgaaaaacagaactatgtt
catcgtattgggagagtaggcagagctgagaggatgggtttggcaatctcccttgtggca
aaagagaaggaaaaggtttggtatcatgtatgcagtagtcgtggaaaagggtgttataat
actagactgaaggaagaaggaggttgtaccatatggtacaatgagatgcagttgctgggg
gagattgaagaacacttaaactgcactattgcccaagttgaaccagacataaaagtacca
gtagatgattttgatgggaaagttacatacgggcagaaaagagctctgggtggtggactg
tataaaggccatgtggatattctggcacctacagtacaagagttggctgcccttgaaaag
gaggctcagacatctttcttgcatcttggctatcttcctaaccagctgttcagaacattc
tga
DBGET
integrated database retrieval system
