Gymnogyps californianus (California condor): 127015142
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Entry
127015142 CDS
T08687
Name
(RefSeq) LOW QUALITY PROTEIN: TATA box-binding protein-associated factor RNA polymerase I subunit B
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
gcl
Gymnogyps californianus (California condor)
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gcl03021
]
127015142
Transcription machinery [BR:
gcl03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
127015142
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
DUF5816
Motif
Other DBs
NCBI-GeneID:
127015142
NCBI-ProteinID:
XP_050750865
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Position
3:111172987..111223606
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AA seq
591 aa
AA seq
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MDEEATRDFNERCAQCSEVNWGITDGGRFYCRSCHNVTERTREVVNTDFISNARIQTISK
GLRKQEKTDGGCEWYVCEGFQLVLKKQAEALEALGVCSQMKDEILYNFWRCYLQKSKQAY
CNRPAEETVKALSVCDSSTDVDSEPEKSSLLHLLSLSESEGDLQTDCSFASSTSKVSEST
SVCSGSVDGSLYLMKNQKEKLRMTMPMTLSFCYMALLWLREPMTLSDLLRFVVEGHIPYL
NVFQHFPEKMKLCGLDLKIFCVESWPVYEEVYNKMLELAAFLDLPRFPDITDSCFLHPDM
LCMKYLMEANLPDELHNWTCRVVKKICIGEVDFLTLVPGNKSTRKVKYDVLAAAVIVVVL
KLLFLLDDHYEWLLSDFAEERNKNNKEGGPYFEFKKWYKVIKCSLDVEQKKLDEERAKYL
WRCEKPLFYSAKKKSKVLKRRQMVVNLQNQFGKLSGSVRPAEKPNPSSFQLSWSEENTDG
SCFHGHSLKGILQEKCGLLTAMNPDYWLCTVKLCTEKLCGHLAHYREVDFPQSYHFVLRL
FSFLLRIQPSYIHDEVCVIEHKLFNKKLCKKPKQDRSKEVKRSKNNSTKTM
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggaggccacgagagattttaatgaacgctgtgcccaatgttcagaagtaaac
tggggtatcactgatggaggcagattttattgccgatcttgccacaatgttactgagaga
actagagaagttgtaaacactgattttatttctaatgcaagaatccagacaatctccaaa
ggtttaagaaagcaggaaaaaactgatggaggctgtgaatggtatgtttgtgaaggcttt
cagcttgtactcaagaaacaagctgaagctttagaagcattgggagtatgttcacaaatg
aaggatgaaattctgtacaatttttggaggtgttaccttcagaagagcaaacaggcgtat
tgcaacagaccagctgaggaaactgtcaaagcgttatcagtctgcgatagcagtactgat
gtggacagtgaaccggagaaatctagccttctgcacttgttgtccctctctgaaagtgag
ggggatctacagactgattgcagctttgcctcatcaactagcaaggtctcagaaagcacc
tctgtgtgctccggatcagtagatggtagcttgtatttaatgaagaaccaaaaggagaaa
ctgaggatgacgatgccaatgaccctttcattttgttacatggcattactctggttgaga
gaaccaatgacgttatctgatctcttaaggtttgttgttgaaggtcatattccatatttg
aatgtttttcagcattttccagagaagatgaaattatgtggacttgatcttaagatcttt
tgtgtagagtcgtggcctgtatatgaagaagtctacaacaaaatgcttgagcttgcagcg
tttttagacctgcctcgatttccagatataacagacagctgctttcttcatccagacatg
ttgtgcatgaagtacttgatggaagctaatttacctgatgaattgcataattggacttgt
cgagtggtgaaaaagatctgtattggagaagtggatttcctgactcttgtgcctggaaat
aagtcaacaagaaaagtgaaatacgatgttcttgctgcagcagttattgtagttgtgctc
aaattattgtttttattagatgatcactatgaatggttactttcagactttgctgaagaa
agaaataaaaataacaaagaaggtggtccatattttgagttcaaaaagtggtacaaggtg
ataaaatgttccttggatgtggagcaaaagaaattggatgaagaaagagccaaatatctg
tggagatgtgaaaagccactgttttattcagccaagaagaaatctaaagttcttaagaga
agacaaatggttgtgaacttacaaaatcagtttggcaagctgtctggttcagtgcgacct
gctgaaaagccaaatccttcaagttttcagttaagttggtctgaagaaaacacagatggg
agttgttttcacgggcatagcctgaagggaattttgcaagaaaaatgtggtttacttaca
gccatgaaccctgactattggctgtgtacagttaaactatgtactgagaaattgtgtggt
catctggctcattacagagaagtggactttccccagagttaccattttgtactaaggtta
ttctcctttcttctgaggatacagccctcttatatccatgacgaggtgtgtgtgatagaa
cacaaactttttaataaaaaactctgtaaaaagccaaaacaagacaggtctaaggaagta
aaaaggtctaaaaataacagtactaaaaccatgtaa
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