Gymnogyps californianus (California condor): 127015466
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Entry
127015466 CDS
T08687
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear factor NF-kappa-B p105 subunit
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl04010
MAPK signaling pathway
gcl04210
Apoptosis
gcl04218
Cellular senescence
gcl04620
Toll-like receptor signaling pathway
gcl04621
NOD-like receptor signaling pathway
gcl04622
RIG-I-like receptor signaling pathway
gcl04623
Cytosolic DNA-sensing pathway
gcl04625
C-type lectin receptor signaling pathway
gcl04920
Adipocytokine signaling pathway
gcl05132
Salmonella infection
gcl05164
Influenza A
gcl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127015466
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
127015466
04218 Cellular senescence
127015466
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
127015466
04621 NOD-like receptor signaling pathway
127015466
04622 RIG-I-like receptor signaling pathway
127015466
04623 Cytosolic DNA-sensing pathway
127015466
04625 C-type lectin receptor signaling pathway
127015466
09152 Endocrine system
04920 Adipocytokine signaling pathway
127015466
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
127015466
05168 Herpes simplex virus 1 infection
127015466
09171 Infectious disease: bacterial
05132 Salmonella infection
127015466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gcl03000
]
127015466
Transcription factors [BR:
gcl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
127015466
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
127015466
NCBI-ProteinID:
XP_050751358
LinkDB
All DBs
Position
4:56686568..56749680
Genome browser
AA seq
979 aa
AA seq
DB search
MAGEDSYIMGVSDPQMFAMDQFMGMNALFNNTNYITSDLPLRTADGPYLQIIEQPKQRGF
RFRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIVQLVTNGKYVHLHAHSLVG
KFCEDGVCTVNAGPKDMVVGFANLGILHVTKKKVFETLETRMIDACKKGYNPGLLVHPEL
GYLQAEGCGDRQLTEREREIIRQAAVQQTKEMDLSVVRLMFTAFLPDSNGSFTRKLDPVI
SDAIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEDENGGMWE
GFGDFSPTDVHRQFAIVFKTPKYRDVNITKPASVFVQLRRKSDLETSEPKPFLYYPEIKD
KEEVQRKRQKLMPNFSDGYGGGSGAGGGGMYGGGGGGAGSGFSYPSYGYSAFGGMHFHPG
TTKSNAGMKHGLSNSIAEQDGKTSDKQSDKWDRKQDVKVDTMERNECRTSGDNEEKEDAA
SSCEIEVNEADWRWQDGLFLEKAKQLAKRHCNALFDYAVTGDVKTLLAVQRHLTVVQDDN
GDNVLHLAIIHLHTELVKNLLEVMPGLNYNDIINMRNDLYQTPLHLAVITKQAEVVEDLL
KAGADVSLLDRHGNSVLHLAATEGDDKILSLLLKHKKISPMVDLSNGEGLSAIHMVVMAN
SMSCLKQLIAAGVNVNAQEQKSGRTALHLAVEQENIPLAGCLLLEGDADVDSTTYDGTTP
LHIAAGRGSTKLAAVLKAAGANPHVENFEPLFDLDDVKDDEDDDEGIVPGTTPLDMAASC
EVYDILNGKPYESAAVSEDLLTQGHLRELNESSKMQLYKLLELPDPNKNWSTLAQKLGLG
ILYNAFRLSPSPSKTLLDNYEVSGGTIQELIAALRQMDHTEAIEIIQKALSXSQSLSHLE
DDTAKAVPSSPPATFANGETGELYNSKFQDNESTCDSGVETSFRKLSFTYSDSLNSKSSV
TLSKMTLGYGHKVQCKAII
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagaggattcctatattatgggagtgtctgatccccaaatgtttgcaatggat
cagttcatgggaatgaatgcattatttaataatacaaattacatcacttcagacttacca
ctacgaacagcagatggaccatatcttcaaatcatagaacagccaaaacagagggggttt
cgtttccgatacgtatgtgaagggccttcacatggtggacttcctggtgcttctagtgaa
aagaacaaaaaatcataccctcaggtcaaaatttgcaattacgttggacctgcaaaagta
atcgtccagttagttactaatgggaagtacgttcacttacatgctcacagcttggtgggt
aaattttgtgaagatggagtatgcacggttaatgcaggacctaaagatatggttgtaggg
tttgcaaatcttggaatacttcatgtcacaaagaagaaagtgtttgaaactttggaaaca
cgcatgatagatgcttgcaaaaaaggatacaacccgggactcctggtgcatcctgaactt
ggctatctgcaggcagaaggatgtggagacagacagctaactgaacgagaaagagaaatt
attcgtcaggcagcagtacagcagactaaagaaatggatctcagtgtggtgcgtcttatg
tttacagcctttctccctgacagtaatggtagtttcacacggaaacttgatcctgttata
tcagatgcaatatatgacagcaaagctcccaatgcctccaacttaaaaattgtaagaatg
gacagaacagcagggtgcgtaacaggaggggaagagatttaccttctctgtgacaaggtt
cagaaagatgatattcaaatacgtttctatgaagaagatgagaatggtggtatgtgggaa
ggctttggagacttttctcctacagatgtacatagacagtttgctattgtgttcaaaaca
cccaagtatcgagatgtcaatatcacaaagccagcatctgtatttgtacaactgcgtcgg
aaatctgatctagaaacaagtgaaccaaagccttttctctactatccagaaatcaaagat
aaagaagaagtgcaaaggaaacgacagaagctcatgccaaacttctctgatggctacggt
ggaggcagtggcgcaggaggcggtggcatgtatggagggggaggtggcggtgctggctct
gggttcagttacccttcatatggatactctgcttttggagggatgcatttccaccctggc
acaacaaagtccaatgctggaatgaaacatggactatcaaatagcatagctgaacaagat
gggaagacctctgataaacaaagtgacaaatgggacaggaaacaagatgtgaaagtggac
actatggagaggaatgagtgcagaacctctggtgataatgaggagaaggaggatgctgct
tcttcctgtgaaattgaagtaaatgaagcagattggaggtggcaggatggtctgttcttg
gagaaggccaagcagcttgccaagcgtcactgcaatgctctctttgattatgctgtaact
ggagatgtgaagacgctgttggctgttcagcgccatctcactgttgtgcaggatgataat
ggagacaatgtccttcatttagcaattatccaccttcatactgagctggtgaaaaacctc
ttggaagtgatgcctggtttgaattataatgacatcattaacatgagaaacgacctttat
cagacccccttgcacctggcagtaatcacaaagcaggcagaggtggtagaagacttgctg
aaggctggagcagatgtcagccttctggatcgccatgggaattctgtcttgcatttagct
gctactgaaggagacgacaagattttgagtctactcctcaagcataagaagatatctccg
atggtcgacctttccaatggtgaaggtctcagtgcaattcacatggtggtgatggcaaac
agcatgtcctgcctcaaacagctgattgctgctggagttaatgtcaatgctcaggaacaa
aaatctggacgaactgcattgcatttagctgttgaacaagagaacatccctttggcaggc
tgccttttgcttgagggtgatgcagatgtggacagcactacgtatgatgggacaactcct
cttcacatagcagctggaaggggctctacaaaattggcagcagttctcaaagcagcaggt
gcaaatcctcacgttgagaactttgagccattgtttgatctagacgatgtgaaagatgat
gaagatgacgatgaagggattgtgcctggaacaacaccactggatatggcggccagctgt
gaggtgtatgacatattaaatggcaaaccctacgagtcagcagcagtttcggaggactta
ctgacacaaggacatttgagagagctgaatgaaagttccaagatgcagctttacaaatta
ttggaattgcccgatccaaacaaaaactggtccactctagcacaaaaactgggtcttggc
atactttataatgccttcaggttgagcccttccccatcgaaaactctgctagataactat
gaggtatctggtggtacaattcaagagttgatcgctgctttgagacagatggatcacaca
gaagccattgaaatcattcagaaagcactatcgntctcacaaagcctgtctcacctggag
gacgatacagcaaaagctgttccatcatcaccaccagccacctttgcaaatggagagaca
ggcgagctttataatagcaaatttcaagacaacgaaagcacgtgtgacagtggtgtggag
acctccttccgcaaactgagctttacttactcagactctctgaacagcaagtcatcagta
acacttagcaaaatgaccctgggctatggacataaagttcagtgcaaagcaattatatag
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