Gymnogyps californianus (California condor): 127015499
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Entry
127015499 CDS
T08687
Name
(RefSeq) centrosome-associated protein ALMS1
KO
K16741
alstrom syndrome protein 1
Organism
gcl
Gymnogyps californianus (California condor)
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gcl03036
]
127015499
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gcl03037
]
127015499
Chromosome and associated proteins [BR:
gcl03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
127015499
Cilium and associated proteins [BR:
gcl03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
127015499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALMS_motif
Motif
Other DBs
NCBI-GeneID:
127015499
NCBI-ProteinID:
XP_050751434
LinkDB
All DBs
Position
4:1898319..1975267
Genome browser
AA seq
2897 aa
AA seq
DB search
MEPGEEAEEEEEERVPVSTGSAEGFGQAAFGGNVAGGQERGQQSGLSLVEATKTVRGLEH
TVHEEKLRRLGLFGLRRRLKPIATTPPHRRWKEESLSRSSSETQASVTSGISLGEAIRQK
TAINWGIEPWYQLPAEEDASHLTAASETKLGLTCDRNDLTEFPTLEEGVLPSAEASRRQS
PGDIAHGLLLDIQDSRFSPCLPLLMYSTRGRRFSDETLLQQSEMDFIPLRGVPDVSGASE
EHSKPSHTREAVSLTDTEPPSNAPSDCFTLSQHPLPFRHVEPCDATCSGSLSQQTSFSGQ
LLVSKEANEDCKNGTNEEALIPQTSDNLANSISKVMLTKANRLNQTEAPLAKQTCSTSVK
GERFSRDSSVPATVFELSEKEKGFLRHEEFSSSENSSCKTALTKNSEKSERKMQKEKVKM
VESESEGCMRQLEKLEKEKKVPELDLSNNLSDNLRKDNCKNSDAQDVFSETGEGVSKEHG
VDLNGSESLKFVAVTEEVQGAFLDHQQKQLSPAVRSEKEEFIPTVTSTSDCAPKQLVVTD
MEAPSSCSEAGPVEVEPGVSRSELTISDFSIERGHKVTGISPSFNLVGDGSFSVHFAHPS
YQSTPGILLKKNVKPEELGVLVSKSDIQASPSCLNEETSGNSSTSTPVSVEKQHSLPCAQ
KENNEHFESLKWKYPHTGRIQSLPSLSFMEKVGAWNVSQPEEVSDAVTSCDPGGVSPRRK
AYSAIASSSNNILSTQKSSRDAKDYVAACSREAGSLGSLHFHNKNLLLVHPLTRSQSDNA
VNVSGRITSSVEVIPPANSTEALQSLEEKSNVLGVSENSSGGSMIQKFTAQIVSGSSGED
VESSNTGQSSDPNVFVSGEGVAQLLREDGNSPTDDQKNCDAPENQSHNLNIPTGCVSMDN
FVDISPDSLNLSVSSGESSQGGLGSAGYPSVFSRHFFTSAKDDNVIPVGATSLETPEKEE
LNIEERIPIYLRNLGIDQSPGTILTPFVPRGPIREVEFSPSELRTLKDSTDTLTRTVPQP
QGKLLSAVEITQTSFNSGTSTLSMSIPMNSELGSDILSPRELSPRFSRSFGEKPVSQCSM
SCHQLKITAPISTRRETECSAVSKPAEPNQQLQTVSPDCRSDRESPMLVAKSVQDLLAKN
ESKDVNSNLQRWTASSSAGVKNEMEVDRGSQISSVGSKRNKGQESDSLIGSGALQEIHKL
LAEAEDIAGRWCDPVFSTASSRETGESSPVLIRKEDGPEDSRLVKGSIPQFQKMLSRDET
MTRRSMQEGGSVVKPLNYNTGNLRWENSFEVNLRNSEEMMKGMTKEFRTGKSVGRSEPEG
CSSVTTDRNQPGFVGLAQSNGSSEVSSGRTSELGNPSSSEPLGSVTDVAAGFQNMLSKAS
VAGSKSGGMQECDDSSSGDSLAACVKNLLRNGSPVIHTTQTLKSADEEERKARAWVKLKL
ASRSQESVSDFNEEDQQRIEEIKAELLLSAKKSALAKDPQVCVLEAASEYSRNQEQDIEH
FKAPSDKRFQTDKQTQAVRTKELLESSLRQAVPLYRADPSDCCLLKDTQFKSLSTIQTPI
CNQHQTVATSHSDAVVEVHPSLLKEWDTGAMRSAAASDIQAEVHLSAQKQLSMEKCSEDM
AKQITSITFSSRKRLQSPLTSMALSSSLTRDGLDGIMPLEVDSASTEEQSHGKQHWERSK
TCPPSSPMLAGSVSNEIAFTAEKDRFHHVSADSNRVGAYQETDCLSDQDSVSIHADKRQT
LSAKNSDVLPQDVTELGRHSARLVGLDCDTRFSKETNRFNELHSISSYQQEKSSPPGRIQ
LHESLEGSDPAVQTDLLKGHIKLLEEEKKSPSDEVPVVQKEIEREQIGMSRHSSTDEILS
TTSVSPSSPTKKVLSCVHITLSSKCNNSELHGDVSTESEMRSWDKPEVNTQPASLKTPET
LMEAVSKLSAADLIPEDQRSSSFPMPVSSADPCLVLSSVTITAGQELPLQSSERPEVTVL
VSGGCSLKNIFNSVVPAKTGKSTSDATTQITTESPEKTTFSAEIYVNSQDSENAGHQSSL
QKAHELPNNTTSSLNKISSFPRQSDQPLLLPYKPSGSTGMYYVPYLKAGTKISPVGSETS
VESFHSGSNDALPPRFPANVLGLRDDNPPDSMAIKHKQGIYSKRAKPKLAWAEEQKIPLE
ASPECTDHSKPVKTTHSVFKSARFDLHHPMPMCESYFLSNSELSEDSSGIGHARPSSSAV
LQNRKNAHCHQRVFSVRHKKDGENEFFPLAAEADYSKNEDLNVSTSLGNETSGKELLQHG
RREAEQKAARNYPLPCSQTTLLNENVEKELPPRQRTHSSASLDELWIKFLECRKRHQHHD
FRSNRELSLVERLDRLARVLQNPVKHTIIPTKSEKNVSEKKIKEREQKKIRLPEKRMSES
TLEPNVTHVEERPCITHHKNSLVELRKNRSGEKIICHMNKILEHQQYLETPSDTSSEARL
SRDHGTTISSTTSESDVVTQTEMETATQTEVSSSISTIDTARLIRAFGRERVQVSPRLSQ
LYCTINHQKSRSEKWDKGSGKAVGVEYPKVASERHRKRKEIQKAISLSSDSTSASSSSWG
PSSALSNKRRTRMLNKGIQAGDLEIVNSATKKNTRDVGVTFPTPRSSQPNQRPQEPWHSV
DGHFGESDGMVTDHQAAGSKDKQKGQPGNFFVEKRTKRSRLHLPQGISWFVQAEDLKSES
RKENHSNSFSGPGPSWFEPLTSTKPWREPLREKNWQEQQHSNMIQPAVPEREAENRSLRP
FVKLTLQEALAVHRPDFISRSGERVKHLKLVMEERRIQSVLQSEREELFNPPEKRKGYRN
ASHMLSDRGFLTRENRRTIPKSEMVQRSKRIYEQLPEVQKKREEEKRKMEYNSYRLKAQL
YKTKITNRVLGRKVPWN
NT seq
8694 nt
NT seq
+upstream
nt +downstream
nt
atggagccgggagaggaggcggaggaggaggaggaggagcgggttcctgtgagtacaggg
tctgcggaggggttcgggcaggcggcctttgggggcaatgtggcgggaggacaagagaga
ggtcagcaaagtggcctgagtctggtggaggccaccaagacagtcagagggctggagcac
acggtgcatgaggagaagctgcggaggctgggtttgtttggcctgaggaggaggctgaag
cctattgcaacaaccccaccacatcgtcgctggaaggaggaatccttaagccgcagcagt
agcgaaacccaggcatcggttaccagtgggatctccctaggagaagcaatacgtcagaaa
actgccattaattggggaatcgagccatggtatcaacttccagcagaagaggatgccagc
catttaactgctgcctcagagacaaagcttggcctgacttgtgatagaaatgacctgacg
gagttccctacgctggaggaaggagtgttgccttcagcagaagcatctagaagacagtct
cctggagatatagcacatggcttactgctggatattcaggacagtcgattctctccctgt
cttccactgctgatgtattcaacacgaggccgaagattttcagatgagacacttctccag
caatcagaaatggattttattcccctacgaggagtccctgatgtttctggtgcgtctgag
gagcattcaaagccttcgcacacccgtgaagctgtgtcgctgacagacacggaacctccc
tctaatgcacccagtgactgctttactttgtcccagcatcctcttccattcagacatgtg
gaaccttgtgatgccacttgtagtggttctttgtctcagcaaacctctttttctggacaa
ctacttgtgagcaaggaggcaaatgaagactgtaaaaatggtactaatgaggaggcattg
attccccaaacaagtgacaatttagcaaactccatttcaaaggtgatgctaaccaaggca
aatagactgaaccaaacggaagctcctcttgcaaagcagacctgtagcacgtctgtaaaa
ggtgaacgtttctctcgtgacagcagtgtgccagctactgtttttgagctttcagagaaa
gaaaaagggttcctgaggcatgaggagttctcatcttcagaaaactcctcttgtaaaaca
gcactgactaagaattcagaaaaaagtgaaagaaagatgcaaaaggaaaaggtaaaaatg
gttgagagtgagtcagaagggtgcatgaggcaactagagaagctggaaaaagaaaagaag
gttcctgagcttgatttgtctaataatttatctgacaatttgaggaaagacaattgtaaa
aattcagatgctcaagatgttttttctgaaacaggcgaaggagtgtcgaaggagcatgga
gtggatttaaatggctctgaaagcttgaagttcgtggctgttactgaggaagtccaggga
gctttcctagatcatcagcagaaacaactatctcctgcagtgagatctgagaaagaggag
tttatccctactgtgacaagcaccagtgattgtgcacctaaacaactagttgtgactgac
atggaagctccttcttcctgcagtgaggctggcccagtggaagtagaacctggagtaagc
aggagtgaattaactatttcagatttttccatagaaagaggacataaagttacaggcatt
tccccttcctttaatcttgtaggtgatggctcattctctgtacactttgctcatccaagc
tatcagtctactccagggatacttctaaagaaaaatgttaagccagaagaacttggtgtc
cttgtgagcaaatcagatattcaggcctctccttcatgcttaaatgaagaaacttcaggg
aactcatctaccagtacacctgtatctgttgagaagcaacattcactcccatgtgctcag
aaggaaaacaatgaacattttgagtccttaaaatggaaatatccccacactggaagaatt
cagtctctcccatcgcttagtttcatggaaaaggtaggagcttggaacgtgagccagcca
gaggaggtatctgatgcagtgacttcatgtgacccaggtggagtttctcctagaaggaaa
gcctacagtgcaattgccagttcttcaaacaatattttgtcaacacaaaaaagcagtaga
gacgccaaggattatgttgctgcttgctctagagaggcaggttccctgggaagtttgcat
tttcataataaaaacttactgcttgtccatcctcttactagatctcagtctgacaacgcg
gtaaatgtttctggtaggatcacgtcctcggttgaagttattccaccagcaaactcaaca
gaggcattgcagtccctagaagaaaaaagtaatgttttaggagtgtctgaaaatagttcc
ggaggctcaatgatacaaaagtttacagctcagattgtttctggatctagtggtgaagat
gtagaaagtagtaatacaggacaaagttcagacccaaatgtttttgtttccggtgaagga
gttgctcagctccttagagaggatggaaactctccaactgatgaccagaagaactgtgat
gctcctgaaaatcagtctcacaacctaaatattcctactggctgtgtcagcatggacaat
tttgttgatatttccccagatagtttgaatctttctgttagttctggggaaagtagccag
gggggcttgggctctgcagggtacccttcggtgttttccaggcacttcttcaccagtgca
aaagatgataacgtcatccccgttggagcaacttctttggaaactccagagaaagaagag
cttaatattgaagaaaggatcccaatatatcttcgcaaccttggcatcgatcagtcacct
ggtactatactgacgccatttgtaccccgaggaccgatcagggaggttgaattttcccct
tcagagcttagaacgctgaaggactccactgacacactgacaaggactgttccgcagccg
caaggtaaattgctgtcagcagttgaaattacgcaaacaagttttaactctggcacttcc
actctcagtatgtctataccgatgaattcagaacttggctctgatattctgtcaccccgt
gaactctctccccgcttctcaagatcttttggagaaaaaccagtgagtcagtgcagtatg
tcgtgccaccaactgaagataacagctcccatttccacacgacgggagacagagtgttca
gctgtctccaaaccagctgaaccaaaccagcagctgcagactgtttcacctgactgccgt
tctgacagagagagtcccatgcttgttgcaaaaagcgttcaggatctgctagctaaaaat
gagtcgaaagatgtgaatagcaacctgcagagatggactgccagttcttcagctggagtt
aaaaatgaaatggaagttgacagaggatcacaaatttcaagtgtaggtagtaagagaaat
aagggtcaagaaagtgattctttgattggatctggtgcattgcaagaaatacataaactt
ttggcagaggctgaggatatagctggcaggtggtgtgatcctgtcttttccactgcctct
tctagggaaactggtgagtcttccccagtgctgattagaaaggaggatggccctgaagat
tccaggttagtgaaaggcagcatccctcagtttcagaagatgctgtcacgggatgagact
atgacccgaagaagtatgcaagaaggggggtcagtagtaaagcctctgaattataacaca
ggcaatttaagatgggaaaattcttttgaagtcaatttgcgcaatagtgaagagatgatg
aagggaatgaccaaagagtttaggacaggaaaatccgtaggaaggtctgagccagaaggc
tgtagtagtgtaactacagacagaaatcaacctggttttgtgggtcttgcacaaagcaat
ggaagtagtgaagtcagctctggaagaacttcagagctggggaatccttcttcctcagag
cctctaggcagtgtcactgatgttgcagcaggcttccagaatatgttgtctaaagctagt
gtagctggaagcaaatcaggaggcatgcaagagtgcgatgacagtagcagtggagattca
ctagctgcgtgtgtcaaaaaccttctgagaaatggatcacctgtgatacatacaacacaa
actctgaagagtgcagatgaagaggagaggaaagcacgagcatgggtgaagctaaaactg
gccagccgatctcaggaatctgtgtcagactttaatgaagaggaccaacaaagaatagag
gaaataaaggcagagctgcttctgagtgccaagaaatctgcactagccaaggatccacag
gtatgtgttttggaagctgcttctgagtatagccgtaatcaggaacaggacatagagcat
ttcaaagctccaagtgacaaaagatttcaaaccgacaaacaaacgcaagctgtcaggact
aaggagcttttagagtcaagcttacgacaagctgtgccattatatagagctgatccttct
gactgttgcctgctgaaggatacgcagtttaaatctttgagtaccattcaaacacctatc
tgcaaccaacatcaaacagttgcaactagtcattctgatgctgttgttgaagttcatcca
tcattgctgaaggaatgggacacaggtgcaatgaggtctgcagcggcttctgatatacaa
gcagaagtccatttatcagctcagaagcagctgtctatggagaagtgttctgaagatatg
gctaagcaaattacttctatcaccttttcgtcccgaaaacgtttgcagtcaccattgact
tccatggcactcagcagtagtcttactagagatggtcttgatgggataatgcctttggag
gttgactctgctagcactgaggaacagagccatggcaaacaacactgggaaagatctaag
acctgtcctccttcaagtccaatgcttgctggctcagtgtctaatgagattgcttttact
gctgagaaagacaggtttcatcatgtctctgctgacagtaacagagttggagcttatcaa
gaaacagactgtttgtcagatcaggattctgtaagcatccatgctgataagagacagacc
cttagcgcaaaaaattctgatgttctgcctcaagatgtgactgaattgggcaggcatagt
gccagactcgtggggcttgactgcgatacaagattcagtaaagaaacgaatagatttaat
gaactccattctataagctcttaccagcaggagaaaagcagtccacctggacgcatccaa
ttacatgagagcttagaaggttcagatccagccgtacaaactgatttgctgaagggccat
attaagttattggaagaagagaagaaaagtccttctgatgaagtacctgtcgttcagaaa
gagattgagagagagcaaattggtatgtctcgccattcatctacggatgagattttatcc
accacgtctgtttctccttcatcaccaactaagaaagtactgtcttgtgtccacataact
ctttcctcaaagtgtaataactcagagctgcatggtgatgtgagtactgaaagtgagatg
agatcgtgggataaacctgaagttaatactcaaccagcgtctttaaaaactccagaaact
ttaatggaagctgtttctaaattatcagctgctgaccttattccagaagatcaaagatct
tcatctttcccaatgccagtgtcttcagcagatccctgcctagtgctttcctctgttaca
atcacagcagggcaagagctgcctctgcaaagcagtgaaagaccagaagtcactgttctg
gtttcagggggatgtagtctgaagaatatcttcaactctgtagttcctgcaaaaactggg
aaaagtacttctgatgctaccactcagataacaacagaaagccctgaaaaaacaaccttt
tcagcagaaatatatgttaattcacaagacagtgaaaatgctggccaccagtcgtctctc
cagaaagcacatgaacttcccaacaatacaacttcatctcttaacaagatttcctctttc
ccaaggcagagtgatcagcccttattgctgccatataaaccttctggaagtactgggatg
tattatgttccttatctcaaggcaggaaccaaaatttctccagttgggtcagaaaccagt
gttgagagctttcactcagggtcaaatgatgcccttcctccaaggtttccggcaaacgtg
cttggtttaagggatgataatcctccagacagtatggctatcaagcataaacagggaatc
tacagtaagagggccaagcccaagctagcctgggctgaggagcaaaagataccactggaa
gcttccccagaatgcacagatcattcgaagcctgtaaaaaccactcattcagtcttcaaa
tctgcacggttcgaccttcatcatccaatgcccatgtgtgagagctacttcctgtctaac
agcgagctgtcagaagacagttctggtattgggcatgctagaccttcctcaagtgctgtc
ttgcagaatcggaaaaatgcacattgtcatcaacgtgttttctctgttcgtcataaaaaa
gatggtgaaaatgaattctttccactcgctgcagaagcagattacagcaagaacgaggat
ctaaatgtcagcacatctttggggaatgaaacgtcagggaaggagctacttcaacatggc
agaagagaagcagaacaaaaggcagctagaaattatcctttgccatgtagccaaacaact
ctccttaatgagaatgtggagaaagaactaccaccaagacagagaacccactccagtgct
agcttagatgaactctggattaagtttttggagtgccggaagagacaccagcaccatgat
tttaggagtaacagggagctgtcccttgttgaacgccttgatcgattggccagggtcctt
cagaatcccgttaagcatacaataataccaacaaaatctgaaaagaatgtttctgaaaag
aaaataaaggaaagagaacagaagaaaataagactgccggaaaagcgcatgtctgaaagt
accttagagcctaatgtaacacatgttgaagaaagaccatgtatcacccatcataaaaac
agccttgttgagctcaggaaaaatagatcaggagagaaaattatctgccacatgaataaa
atcttggagcaccagcagtacttggaaactcctagtgacacttcctcagaggcaaggctt
agtagagatcatggcaccacgatcagttccaccacctctgaatccgatgtggtgacccaa
acagagatggaaactgctactcagactgaggtgagcagttccatttccaccattgatact
gccaggctgatcagggcttttgggcgtgaaagagtgcaggtgtcgccaagactctcccag
ctttattgtaccatcaaccaccagaaaagtcgctctgagaagtgggacaagggaagtggc
aaagcagtgggtgtagaatatccaaaggttgcttctgagagacacaggaaaaggaaagag
atccagaaggcaatctccctttcatcggattcaacttctgcaagcagcagttcttggggg
ccaagctctgctcttagtaacaagcggcggacacggatgctaaacaaaggtatccaagca
ggagacttggagattgtgaacagtgcaactaagaaaaacactcgagatgttggcgtgact
tttcctaccccaagatctagccagccaaatcaacggccacaggaaccctggcattccgtt
gatggtcattttggagagtcagatggtatggtcacagatcatcaggcagcaggaagcaag
gataagcagaagggacagccaggcaattttttcgtggagaaaaggacaaaaaggagcagg
ctgcatttaccacaagggatttcatggttcgtccaggcagaagacttgaaatctgaatct
aggaaagaaaaccattccaattccttttctggtcctggtccatcttggtttgaaccattg
accagcacaaagccttggagagagcctctccgagagaagaactggcaagagcagcagcac
agcaacatgattcagccagcagttccagaaagagaggctgagaacaggtccttgcggccg
ttcgtgaagcttacgctacaggaggctcttgcagtgcatcgccctgatttcatctcccgc
tctggagagcgtgtgaagcatctgaagcttgtaatggaggaaaggaggatacagagcgta
ctgcagtctgaacgagaagagctatttaatcctccggagaaaagaaagggctacaggaat
gctagtcacatgctgtctgacagaggttttctgactagagaaaacagaagaacaattccg
aagagtgaaatggttcaaagatctaaacggatctatgagcagctgccagaggtgcagaag
aagcgagaggaagagaagagaaaaatggaatacaactcataccgcctgaaagcacagctt
tacaaaacgaaaatcaccaaccgtgtcttagggaggaaggtgccttggaactga
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integrated database retrieval system
