Gymnogyps californianus (California condor): 127015585
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Entry
127015585 CDS
T08687
Name
(RefSeq) bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN isoform X1
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
gcl
Gymnogyps californianus (California condor)
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gcl03032
]
127015585
03400 DNA repair and recombination proteins [BR:
gcl03400
]
127015585
Enzymes [BR:
gcl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
127015585
DNA replication proteins [BR:
gcl03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
127015585
DNA repair and recombination proteins [BR:
gcl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
127015585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DEAD
Helicase_C
HTH_40
RQC
HRDC
RecQ_Zn_bind
ResIII
NPV_P10
SAM_GIDA_C
Motif
Other DBs
NCBI-GeneID:
127015585
NCBI-ProteinID:
XP_050751560
LinkDB
All DBs
Position
4:complement(82230462..82278979)
Genome browser
AA seq
1430 aa
AA seq
DB search
MHKMDLLTTSLQNKYPQWMLTQNQEGVLGDKKKSPVQRSVLEDGLPFLEFCGSVIYSYEA
SDCSLISEDIRQSLSDGAAVGFDIEWPPSYTKGKMAKIAVIQICVTEEKCYLFHISSMSG
FPKGLKRLLEDETIKKVGVGIEGDQWKLMSDFEIKLKSFVELADVANEKLKCKEIWSLNG
LVKHLFGKQLLKDKSVRCSNWEEFPLNEEQKLYAATDAYAGFIIYQKLKNMNNSDRKLFC
VRDDVLSEGVKERLTSLAEEITDMASRIPDSSGQHENLQRAAEILADISENVNALRRMLF
GSGSPSALERSCGATPTYLEAESANVEAQKVEMPEFAKQLEGDFNICSDATLAGLWEGDG
NEEEAERGNTVEDGAAATSSKDKADRDDFMSLDITEQELQILEHQAAKELVDEAVPEEAC
STDNEQNISCVIESDEELEMEMLKSLEDVDDCNGVLTERESNKARKTPDTELNLAPDGDE
DEGIEEEEEERLDPLLPVPSESHITCLKTYFGHSSFKPVQWKVINSVLEDKRDNLVVMAT
GYGKSLCYQFPPVYTGYTGVVISPLISLMEDQVLQLTMSEIPACLLGSAQSKNIKECIKA
GQYRVIYMTPEFCLGNLELLQDLDQAVGITLIAVDEAHCISEWGHDFRNSFRSLGSLKKA
LPSVPIVALTATASPSIREDIVSCLNLKNPQVTCTSFDRPNLYLEVGQQSGNILRDLKQF
LTRKGSTSAYEFEGPTIIYCPSRKATEQVVSELIKLNVACGAYHAGMGIKQRRETHHQFM
RDEIQCVVATVAFGMGINKADIRMVIHYGAPKEMESYYQEIGRAGRDGLPASCHVLWTAA
DLVFNRHLLSEIRNEKFLLYKLKMLAKIETYLVSNSCRRKIILSHFEDKQLRKVSSGIMG
TEQCCDNCRSRASCFAVPSDSEGGLQDFGKQAYQLLSAVSALEEKFGTRVPILFLRGSSS
QRLPDRYRRHPLFGSGKDWPENWWKSLCLQLIMEGFLKEVSGHSKFATTCVLTQKGRNWL
LKAGSASNPSLLLQSSEDLNLQRPLRSSRPLPALSTQRSPDTKGTMQSPVKQMSLYDMFS
YERKGKTPPRSNNMLNSVAERSPVKSSPLKPPEPVVSSREKELETALYGKLLTARQKVAN
EKLIPPAVLATNKILVEMARIRPTNVENVKRIDGVSEAKSTMLVPLLAEIKDFCQVNGLQ
TDTFPTSGSKDQKEASPWKRTGALSASEHVTYVLFQEKNLSVRAISDSRSLPLSEVGAHL
FQAMKAGYPVNLERAGLTPEVQQIISDVIRNTPIDSDTTKIQEIRKLVPANIELYLIRMT
IALLEKEDRNKSQNGSGVKRMLVWSEGQQEKTGAAQASTEDALCSKTKGNLINPTLKEGA
EKTHLQVVASNSHPPCKRKVPEWFGTSVESVLPATQVKKSKAETRKGIFS
NT seq
4293 nt
NT seq
+upstream
nt +downstream
nt
atgcataaaatggatttgctaacaactagtctgcagaataaatatccacagtggatgctt
acccaaaaccaagagggagttttgggtgacaaaaagaagtcgcctgttcagaggagtgtt
ttggaagatgggctgccgttcctagagttctgcggctctgtcatttacagctacgaagcc
agcgactgttcccttatatcagaagatatcaggcagagtttatcagatggggctgctgtt
ggatttgatattgaatggccaccatcatatactaaaggaaaaatggcgaaaatagctgta
atccagatatgtgtaactgaggagaagtgttatttgtttcacatctcttcgatgtcaggt
tttcccaagggactcaaaagactgctcgaagatgaaacaattaaaaaggttggcgtagga
attgagggagatcaatggaagctgatgagtgactttgaaatcaaactgaagagctttgtg
gagctggctgacgttgctaatgagaaactgaagtgtaaggagatatggagtctaaatggt
ctggtaaaacacctttttggcaagcagcttttgaaggataagtctgtccgctgtagtaac
tgggaagagtttccactcaatgaagagcaaaaattgtatgcagccacagatgcctatgct
ggcttcatcatttatcaaaagctgaaaaatatgaataacagtgaccggaaattattttgt
gtaagagatgatgtgttgtcagagggtgtgaaggagcgcttgacttcactagctgaagag
ataacggacatggcttctcgcatccctgactcttctggacaacatgaaaatttgcagagg
gctgcagaaatactagctgacatatcagagaacgtaaatgccttaagaaggatgctgttt
ggttcaggttccccttctgcgctggagaggagctgtggcgcaactccaacatatcttgaa
gcagagtcagcaaatgttgaagcacaaaaagttgaaatgcctgaatttgctaaacaactt
gaaggtgacttcaacatctgctctgatgctacgctagctggcctctgggagggagatggt
aatgaagaagaggcagagagaggtaacactgtggaagatggggctgcagcaaccagctct
aaggacaaagcagacagagatgacttcatgtcactagacattactgagcaagaacttcag
atcttggaacatcaggctgcaaaagaattggtcgacgaagctgtgcctgaggaggcatgc
tccacagacaacgaacaaaatatttcctgtgtcattgaaagtgatgaagaactggaaatg
gagatgcttaaatctttagaagatgtagatgattgcaatggagttttaactgaaagagag
tccaataaagccaggaaaactcctgacacagaattaaaccttgcaccagacggtgatgaa
gatgaaggcattgaggaagaagaggaggaacgtttggatccattgctgccagtacctagt
gaaagccacatcacatgtctgaagacatattttgggcattcttcttttaaaccggtccag
tggaaagtgatcaattctgttttagaagacaaaagagataatcttgttgtcatggcaact
ggctatggaaaaagcttgtgctaccagtttcctcctgtttacactggatatacaggagtt
gtcatctctcctcttatctccttgatggaggaccaggtgctgcagctgacaatgtcagag
attccagcttgcttgcttggttcggctcagtcgaaaaacatcaaagaatgcatcaaagcg
ggtcagtacagagtcatatatatgactccagagttttgtttggggaacttggagttactt
caggatcttgaccaagctgttggtattaccctcatagcggttgatgaagctcattgcatt
tccgagtggggccatgacttcagaaattcctttagaagtttaggctcattaaagaaggct
ttgccatcggttcccattgtcgctttaactgcaactgcaagtccgtcgattagagaagac
atagtgagttgtctgaacctgaagaatccccaggtcacgtgtactagttttgacagacct
aacctgtacttagaagttggacaacaaagtggaaatatccttagggatttgaagcagttc
cttactaggaaaggaagcacttctgcatatgagtttgaaggccccactatcatctactgc
ccttcaagaaaggccaccgaacaggttgtgtctgaattgattaaactcaacgtggcctgt
ggtgcataccatgctggtatgggaatcaaacaaaggagagagacccatcaccagttcatg
agggatgaaattcagtgtgttgtggctacggtggcattcggaatgggcatcaataaagca
gatatccggatggttattcattacggtgcccctaaggaaatggaatcttattatcaagaa
attgggagagctggtcgcgatggacttcctgcctcttgtcacgtcttgtggactgcggca
gacttggtttttaacagacatcttctcagtgagatacgcaatgaaaagtttttgttgtac
aaactgaagatgttggcaaaaatagagacgtaccttgtgtcaaatagctgcaggaggaaa
atcatcctgtctcattttgaagacaaacaactccgaaaggtttcctctggcatcatgggc
acagaacaatgctgtgataattgcaggtccagagcctcttgctttgcagtccccagtgac
tcagaaggtggtttacaggactttgggaagcaagcgtatcagctgctgtctgcagtgagt
gccctggaagagaagtttggaactagagttcccattctgtttctccgagggtctagttct
caacgcttgccagacagataccgaaggcaccctctttttggtagtggaaaagactggccg
gagaactggtggaaatcactctgcctacagttgataatggaaggattcctcaaagaagtc
tccgggcatagcaagtttgcaactacatgcgtgcttacccagaagggtagaaattggctg
ttaaaagctggatctgcctcaaatccaagtcttctactgcagtccagtgaagaccttaat
ctgcagagacctcttagaagcagtagacctttacctgcgctctcaacgcagcgctcccca
gacacgaagggaacaatgcagtcgccagtcaagcagatgtctctttatgatatgttttca
tatgagagaaaaggtaaaactcctccaagaagcaataacatgcttaacagtgttgcagag
cgctcaccggtgaaatcttctcctttgaagcccccagaacctgttgtttcatcccgagaa
aaagaactagagactgctctatatggcaagttgctgactgctagacagaaggtagctaat
gagaagctaattcctccagctgtcttggcaaccaataagatcctggtggagatggcccga
ataaggcctacgaatgttgagaacgtgaagagaattgatggtgtatctgaagcgaaatcc
accatgttggtccctctcctggctgaaattaaggacttctgccaagtgaatggtttgcag
actgacacattccccacatctggatctaaagatcagaaagaagcatctccttggaagcgt
acgggagccctctctgcctcagagcatgtcacgtatgtcctgttccaagagaaaaatctc
tctgtgagggctataagtgacagcagatctctacctctttctgaggttggtgctcacctg
ttccaggcaatgaaagctggctaccctgtcaacctggagcgagcaggtttgactcctgaa
gttcaacagatcatttcggatgtcatccgtaatactcccattgactcggacaccaccaaa
attcaagaaattaggaaacttgttcctgcaaacattgaactgtatctcatcaggatgact
attgcattattggagaaagaggatagaaataagtctcagaatggctcaggtgttaaaagg
atgttggtttggtcagaaggccagcaggaaaagacaggagcagctcaagcaagcacggaa
gatgccttgtgcagtaaaacaaagggtaatttgatcaatccgacactgaaggaaggagca
gagaaaacccatctgcaagtggtggcttcgaactcgcatcccccttgtaagaggaaggtg
ccggaatggtttggaacctcagtggagtcagttctacctgcaacccaggtgaagaaatcc
aaagcagagaccagaaaagggatttttagttga
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