Gymnogyps californianus (California condor): 127015776
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Entry
127015776 CDS
T08687
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
gcl
Gymnogyps californianus (California condor)
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gcl04131
]
127015776
Membrane trafficking [BR:
gcl04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
127015776
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_8
TPR_2
TPR_1
ARM_TT21_4th
TPR_10
SH3_1
ARM_TT21_C
SH3_2
ARM_TT21
Csd3_N
Motif
Other DBs
NCBI-GeneID:
127015776
NCBI-ProteinID:
XP_050751893
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All DBs
Position
4:complement(12162897..12190268)
Genome browser
AA seq
1333 aa
AA seq
DB search
MESSAAAGSASMLSANAIIPGLERKQDRNLERKETEQGRCRSDWKHAEANAAISTVRDGV
RMDTLQEQMECSQSEKCTNVRSRTLRSQAENFPTDISLKLTMVRRKSGCPDPRLQRQLRG
QLRLLENDSREVTAVFSELSARLLSIHSDQDLIVVTFKTFEEIWKFLTYHSLGFINHCME
NLFLDQSFWLCSQEEEETGIEVCINEKSLNLMYRSLLVQEGAFFVSGPDNLIRKTMAIDN
EINTYFETGTFTADVTGGSVDGNMTVLSNASPEPLIPFHQWFLRMYSNPIDTAYKTESKS
IKNVAMGSCLAVMNYESIVSEEMSFQEGDKIEILGYFIECMEWFLGRHVFTGQIGFVKTS
HVKLDLSRNKPQDLDFLEAEELSFFSKEKNLEEVIHFLKQTSITDVCSVYRIDQLEEPEF
QKAHECEIPCSHSSTGSTSKNGKIEKFLKNFKNLEATQAEEPTTGGKDSASSPNTEIFPP
PEGPCFHICQDDVQASDIFESLILFLNRKEYDRNFKNLYDCSYPFINSMFYGFSEEEELV
SFFRLAREAAKKAGMSWALARLCFLLGRLSVKKLKFSQARVYFEEALGAVAGGFSDLYFV
IALYTNLTVIYLTQKNKEKCAHVFDKATSLLMGIPNYICSADLESDILKYALKRTILSQN
KHAEARACFLLAKHYSARKQHEEALPFLERFQLLLNDLGLQNNLSNNCYFKLAESYNEKC
LPHIVLSCIKVTSSQSSSTLMDSLKRIDLVIKNAPKLYGLRKLRQILPSQTAPYLIQALS
SVFTNEQQGLCSTIYLSLAKLYSHHKQYGKAIVYMMKALDSDVSAKPEETINCLVSLAWL
YILYRQYDVALVILNAVVDSSWSNPQQLGIAYNMLAIALKRTNNTKEAAESYYKALRLSE
ETDMTHNQAIALANFGALCLHAAASKLAEHYYIRAVKLFSKLPSMDCGQDFIQVLLQLGC
YYVGGTQREKGRFYYEWAFLVAMETSHLESQLQAIKLLCQFYSTVVPNEAQCVIYNEYQL
SLARKMSNKVLEGQILETISQLYLSLGTERAYRSALEYTKRSLGIFIDLQKKEKEAYAWL
RAGKIYYVLRQNELVDLYIQVAQDAALYTGDPNLGMELFEAAGDIFFNGTWEKEKAVTFY
RDRALPLAVQTGNKTTELRLCNKLVELLVNLKAYEESVEYARASLVLSVNLGNQLNERIA
YHRLAAIHHHLGHCELAEHFYLKALSLCSSPLEFEEETMYYVKVYLILGDIIFYDLKDPF
DAAGYYHLALAAAMDLGNKKAQLKIYTRLAIIYHNFLVDREMSLFFYQKARTFATELNIR
RINLAPDQCYKSS
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atggagagttcggcagcggcaggcagcgcatccatgctcagtgctaacgccatcatccct
ggtctagagagaaagcaagacaggaacttggagaggaaagaaacggaacagggaaggtgc
aggtctgactggaaacatgcggaggccaatgctgccatcagcactgtcagggatggagtc
aggatggacacgttgcaagaacaaatggagtgttctcaaagcgaaaaatgcacgaatgtc
cgttcaagaacccttcgcagtcaagcagagaattttccaactgatatctccttgaagtta
acgatggtaagacgcaagagtggatgtcctgatcccagactccaaagacagctcagaggg
cagctccgtcttctggaaaatgacagcagggaggtgacggcagttttcagtgagctctct
gccagactgctatctattcatagtgatcaagatctaatagtggtgacatttaaaactttt
gaagaaatatggaagttcctaacctaccattcactgggttttataaatcattgcatggag
aatttattcctagatcaatctttctggctctgttctcaagaggaggaagaaacaggcatt
gaagtctgtataaatgaaaaatcattaaatttgatgtacagaagcctgctagtacaagaa
ggggcattttttgtttcaggtcctgacaatctgataagaaagacaatggctatagacaat
gaaataaacacttattttgagactgggacttttactgcagatgtaacaggtggatctgtg
gatggcaacatgaccgtgctgtctaatgcttctccggagccattgatcccttttcatcaa
tggtttcttagaatgtattctaatcctattgatactgcatacaaaactgaatctaaatcc
atcaagaatgttgcaatgggatcctgtctagctgtgatgaattacgaaagtattgtgtcg
gaagagatgagtttccaggaaggggacaaaattgagatcctcggctacttcattgaatgc
atggaatggtttcttggaagacatgtgtttactggccaaataggttttgtaaagacaagt
catgttaaactggacttatctagaaataaaccacaagacctggattttcttgaagcagaa
gagctatcttttttttcgaaagaaaaaaatttggaagaagtgatacatttcttgaaacaa
acctccatcacagatgtttgctctgtgtacagaatagaccaattagaagaaccagaattt
cagaaagctcatgaatgtgaaattccatgttcacattctagcacaggatccactagcaag
aatggcaagatagaaaaattcctgaagaacttcaagaatctggaggccacccaggcagaa
gagccaactactggaggaaaggattctgctagctctccaaatacagaaatctttcctccg
cctgaaggaccttgcttccacatatgtcaagatgatgttcaagcatctgacatctttgag
tcattgatactcttcttaaataggaaagagtatgacagaaacttcaaaaacctgtatgat
tgctcttatccatttatcaatagcatgttttatgggttttcagaagaagaagaactggtt
agcttttttagattagcaagggaagcagcaaagaaagcaggtatgtcctgggcgctagca
aggctatgctttctcttaggcaggctcagtgttaaaaagctgaagttttcccaggctcgg
gtgtattttgaggaagcattgggagcagtagctggagggtttagtgatttgtactttgta
attgctctttatacaaatctaacagtcatctacttgacacagaagaacaaagaaaaatgt
gctcatgtttttgacaaggctacatctcttctcatgggaattcccaactacatttgcagt
gctgacctggaatcagatattctaaagtatgctctgaagaggacaattttgagccagaac
aaacatgcagaggcaagggcatgctttctactggcaaaacattatagtgcacgcaaacag
catgaagaggcactaccgttcttggaaaggtttcaactgttgcttaatgacttgggttta
caaaacaacttatcaaacaactgttatttcaaactagcagagtcctacaatgaaaagtgc
ttgccgcacattgtgttaagttgcataaaggtcacctcttcccagagctccagtacttta
atggattccttgaaaaggattgatttagtcatcaaaaatgctcccaagctctacggcctg
agaaaactcagacaaatactcccatcccaaactgcaccttacctcatacaagcactttcc
tctgtgtttactaatgagcagcaaggactatgcagcactatctatcttagcttagcaaaa
ctgtacagccaccacaaacagtatggaaaagccattgtttacatgatgaaagcattggac
tctgacgtttctgcaaagccagaggaaactattaactgtttggtttcacttgcttggtta
tacattctttacaggcaatatgatgtggctttagtcattttaaatgctgttgtagactct
tcatggagcaatcctcagcaactaggcatcgcttataatatgcttgctattgctttgaaa
agaacaaacaatacaaaagaagctgctgagagctactacaaagctctgcgtctttcagaa
gagactgatatgacccataaccaagctatagccctggctaattttggggcactctgcctg
catgcagcagccagcaagctggcagaacattattatatcagggcagtgaagctattctcc
aaacttccaagtatggactgtggccaagactttatccaagtcctccttcagttgggatgt
tactacgttggtggaactcaaagagaaaaaggaaggttttattatgaatgggctttttta
gttgcaatggagacaagtcatctggaaagtcagctacaagcaattaaactgctgtgtcag
ttctacagcacagttgttcccaatgaggctcagtgtgtcatctacaatgaatatcaacta
tctttagctagaaagatgtccaacaaagttctggagggacaaattttggaaaccattagt
cagctctatttgtctttaggaacagaaagggcttacaggtcagctctggaatataccaaa
agaagccttggaatatttatagatctccagaaaaaagagaaagaggcatatgcttggcta
cgggcaggaaagatatattatgttctgaggcagaatgagcttgtggatctttatattcag
gttgcacaggatgctgccctttacacaggagatccaaatttaggaatggaattgtttgaa
gctgctggagacatattttttaatggtacctgggaaaaggagaaagcagtgactttctac
agggacagggctcttccacttgctgttcagactggcaacaaaaccaccgaactcagatta
tgcaataagctggtggaattgctggtgaatctgaaggcttatgaggaaagtgtggaatat
gcaagagcatctctcgtgctcagtgtaaatttaggaaatcagctaaatgaacgaatagct
tatcatcggctggctgccatccatcatcatttgggtcactgtgaactagctgaacacttt
tatttaaaggccttgtccctctgttcctctcctctggagtttgaggaggaaacaatgtat
tacgtgaaggtgtacttgatcttaggagacattatattctatgaccttaaggatcccttt
gatgcagcaggctattatcatttggcacttgctgctgccatggacctgggcaataaaaaa
gctcaactgaagatttacacaagacttgcaataatctaccataacttccttgtggatcgg
gaaatgtctctcttcttctatcaaaaggcaagaacctttgcaacagagctgaacattagg
agaataaatctagctcctgatcagtgttataagagttcgtaa
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