Gymnogyps californianus (California condor): 127016104
Help
Entry
127016104 CDS
T08687
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127016104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gcl04121
]
127016104
Enzymes [BR:
gcl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
127016104
Ubiquitin system [BR:
gcl04121
]
Ubiquitin ligases (E3)
HECT type E3
127016104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Peptidase_C25_C
Motif
Other DBs
NCBI-GeneID:
127016104
NCBI-ProteinID:
XP_050752385
LinkDB
All DBs
Position
4:51062773..51114936
Genome browser
AA seq
1083 aa
AA seq
DB search
MLCWGYSSFGQPGIGSNLQVIVPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL
NTNGQLGHDCEGSKPEQIGALAGQHIVHVACGESHSVALSDQGQLFSWGAGSDGQLGLTT
IEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQAS
PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLR
SQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIA
CGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKGHWAAHNGQLSGKPDACK
YHIVKHIFSGGDQTFVLCSKYENSLPADDFRTINETRYTCLINDETIDVWRQKLLEKNSS
NSVNNVVQILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMNSQHSILLD
QILKSFESFLIPQLSSSPPDVEAMRIYLILPEFPPFQDSKYYITLTLPLAMAILRLDTNP
SKVLDNWWSQVCPRYFLRLVDLYKGAVVYLLSGRKTLLIPVLFSSYITAALRLLEKLHKV
NQKVKHVEYDKFYIPEISSLVDIQEDYLMWFLHQAGMKVRPSIMQDAVTLCSYPFIFDAQ
AKTKMLQTDAELQMQVAINGANLQNVFMLLTLEPLLARSPFLVLHVRRSNLVGDALRELS
IHSDIDLKKPLKEQAAYSRTCFISERLLQNSAAAVTLLLQLLGGQVIFDGEEAVDAGGVT
KEFFLLLLKELLNPIYGMFTYYPESNLLWFSDTCFVEHNWFHLIGIICGLAIYNFTVVDL
HFPLALYKKLLNVKPCLEDLKELSPTEGRSLQQLLDYPGEDVEETFCLNFTICRESYGVT
EQKNLIEDGDKILVQKDNRKEFVEAYVNYIFNLSIHEWYTAFSTGFLKVCGGKVLELFQP
TELRAMIVGNSNYNWEELEESAVYKGDYTATHPTVRMFWETFHAFPLEKKKKFLLFLTGS
DRIPIYGMSSLRIVIQSTASGEQYLPVAHTCYNLLDLPKYSSKEILSARLVQAIDHYEGF
SLA
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgctatgctggggatactcgtcttttggacaacctgggataggtagcaacctccaggtc
atcgttcccgaaccgcaggtgtatggattcattcatgacagaaatgtcaaggaggtggca
tgtggaggaaaccactctgtcttcctgttggaagatggggaagtgtatacctgtggcttg
aacaccaatggccaactggggcatgactgtgaaggaagcaagccagagcaaatcggagcc
ctggctgggcagcacatcgtgcacgtggcctgtggagagtctcacagcgtggcgctcagc
gaccagggccagctcttctcctggggtgctggcagcgatggacagttgggcctcaccact
atagaagacgcagtgacggtaccaaggttgataaagaaattgaaccaacagacgatactt
caggtttcctgtggaaattggcattgcctggctttggcagcagatggccagttcttcaca
tgggggcagaacagctatggtcagctgggcttgggcaaagaatgtccctcccaagccagt
ccacaacgtgtcaagtctcttgatggcatccctttggctcaggttgctgcaggcggagcc
cacagttttgccctctctctctcaggagctgtgtttggctgggggaagaacagctcagga
cagctgggactaagtgatgaacgagaccgagaatccccttgtcatgtgaagctgttgcgg
tctcagaaggttgtttacatcagctgtggggaggaacacacagcagttctgacaaagagt
ggaggggtgttcacgttcggtgcaggttcctgcgggcaactgggacatgactccatgaat
gatgaagtgaacccccgaagagttcttgagctaatgggcagtgaagtatcccaaattgct
tgtggcagacatcacactttagcctttgtgccttcttcaggaatgatctatgcatttggc
tgtggaacaagaggccagctgggaacagggcacacgtgcaatgttaagtgtccctctccc
gtcaagggtcactgggcagctcacaatgggcaactctcagggaaacctgatgcctgtaaa
tatcacattgttaaacatatcttctctggaggagaccaaacatttgtgctttgctccaaa
tatgagaattccttgcctgctgatgatttccggaccataaatgaaacacgttacacctgt
ttaataaatgatgaaactatagatgtctggaggcaaaagcttttagaaaagaacagttct
aattctgtcaataatgttgttcagatactgtcctcagctgcctgctggaatggaagcttc
ttggagaagaaaatcgatgaacattttaaaaccagtccgaagatcccagggattgatctg
aactccaccagagtgctgtttgagaagctgatgaactctcagcactctattctcctagac
cagatactgaagagctttgaaagttttttgattcctcagctgtccagctcacctccagat
gttgaggcaatgaggatctatctgattctccctgaattcccacccttccaagactccaag
tattatatcacgttaacgcttcctctagcaatggctattctgcgcctcgataccaacccc
agcaaagttcttgataactggtggtctcaagtgtgcccaagatatttcctcaggctagtg
gacctctataaaggcgcggtggtttacctcctcagtggaagaaagacactgttgatccca
gtcctgttcagtagctacattacagctgctctcagacttctggagaaactccacaaggta
aatcagaaggttaaacacgtagaatatgataagttttatatccctgagatttccagcttg
gtggacattcaggaggattatctcatgtggttcttacatcaggctggaatgaaagtaaga
ccatctatcatgcaggatgctgtgacactctgttcttatcctttcatcttcgatgctcag
gctaagaccaagatgttacagacagatgcagaactacagatgcaggttgcaattaatggt
gcaaatctgcagaatgtcttcatgcttctcaccctggagcctctgctggccagaagccct
ttcctggtacttcatgttcgcaggagtaacttagttggtgatgctttaagggagctgagc
atccattcagacattgatttgaaaaagcctcttaaagaacaggccgcttacagtagaaca
tgttttatctctgagaggttgctacaaaattcagcagctgctgtcacgttgctgcttcag
ttgttgggaggacaggtcatctttgatggtgaggaagctgttgacgctgggggagtgaca
aaggaatttttcctcctgttgttaaaagaactcctcaaccccatctatggcatgttcact
tactacccagagtcaaacctgctgtggttttcagacacgtgttttgtagaacacaactgg
tttcacttgattggcatcatatgtggtcttgcaatatacaacttcactgtggtagacctt
cactttcccttggctctgtacaaaaaactcttgaacgtgaagccctgcctagaggatttg
aaggagctatcccctacggaaggaaggagtcttcagcaacttttagattaccctggggaa
gatgtagaagagacattctgcttgaattttacaatctgcagggaaagctatggtgtgaca
gagcagaagaacctgattgaagatggagataaaattctggtgcagaaggacaataggaaa
gaatttgttgaagcctacgtaaattacatcttcaatctctccatccatgagtggtacacg
gccttttctactggcttcctgaaagtgtgtggtgggaaagtcctggaactcttccagccc
acagagctcagggccatgatagttggaaacagtaactacaactgggaggaattggaggag
agcgctgtctataagggagactacactgcgacacacccgactgtgagaatgttttgggaa
acgtttcatgcatttcccttggaaaagaagaagaaatttctcttgtttctgacgggcagt
gaccgcattcccatctacggcatgtccagcctgcgcatcgtcatccagtccaccgccagc
ggggagcagtacctgcccgtggcgcatacctgctacaatctcctggacctgcccaagtac
agcagcaaggagatcctcagcgcccgactggtgcaagccatcgatcactacgagggtttt
agcttagcttga
DBGET
integrated database retrieval system
