Gymnogyps californianus (California condor): 127016120
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Entry
127016120 CDS
T08687
Name
(RefSeq) LOW QUALITY PROTEIN: cGMP-gated cation channel alpha-1
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
127016120
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gcl04040
]
127016120
Ion channels [BR:
gcl04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
127016120
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Connexin
Ion_trans_2
SLC52_ribofla_tr
Noggin
CDC45
Presenilin
Tim54
DDHD
Menin
Sec62
Zip
NatA_aux_su
SlyX
BSMAP
DUF2828
Neur_chan_memb
CIS_TMP
Motif
Other DBs
NCBI-GeneID:
127016120
NCBI-ProteinID:
XP_050752407
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All DBs
Position
4:complement(29517129..29521749)
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AA seq
651 aa
AA seq
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MKVGVIETHHSHTIVPSVVVQDISEDPGPMYKGENRYAKFTILQQYLPSALACYNINNNS
NKDEXKKKKKEKKSKSEKKKDGETQKNKEKKEKNKNKDKSKKKENKEEKKKDIFIIDPAG
NTYYNWLFCITMPVMYNWTMIIARACFDELQHDYLAVWFIIDYISDAIYVADMFVRTRTG
YLEQGLLVKEEEKLQEKYKTSFQFKLDFLSIIPTDLLYFKLGLNYPELRINRLLRVARMF
EFFQRTETRTNYPNIFRISNLVMYIVIIIHWNACVYYSISKAIGFGADTWVYPNTSDPEF
ARLTRKYVYSLYWSTLTLTTIGETPPPVRDSEYFFVVIDFLVGVLIFATIVGNVGSMISN
MNAARAEFQARIDAIKQYMHFRNVSKDMEKRVIKWFDYLWTNKKAVDEREVLKYLPDKLR
AEIAINVHLETLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICRKGDIGREMYIIKEG
KLAVVADDGITQFVVLSDGSYFGEISILNIKGSKAGNRRTANIRSIGYSDLFCLSKDDLM
EALTEYPDAKAMLEEKGKQILMKDGLLDIEVANLGSDPKDLEEKVTYMERAMDRLQTKFA
RLLAEYEAAQQKLKKRLTQIEKILKPVIEQEFADLEEADPSTDKPGVSKAE
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtaggagtaattgagacccatcactcccatacaattgttcccagtgtggtagtg
caagacatcagtgaggaccctggaccgatgtacaaaggggaaaacaggtatgccaaattt
accattttgcaacagtatctacccagtgcacttgcatgctacaatattaacaacaatagt
aataaagacgagtaaaagaaaaagaaaaaagaaaagaagagcaagtcagaaaaaaaaaag
gatggagaaacacaaaagaacaaggaaaaaaaggagaaaaacaaaaataaagataagtcc
aagaagaaagaaaataaagaagagaagaagaaagatattttcattattgatccagcagga
aatacgtattacaactggttgttttgcatcacaatgcctgtcatgtacaactggaccatg
attattgctagagcctgttttgatgagcttcagcatgactacttagcggtatggtttatt
attgattacatttctgatgccatttatgttgctgacatgtttgtacggacaagaacaggt
tacctggagcaaggtcttctcgtgaaagaagaagaaaagcttcaagagaaatataagaca
tcttttcaattcaaattagattttctgtcaatcataccaactgatctcttatactttaag
ttaggactgaattacccagaattaagaataaacagactactcagagtagctcggatgttt
gaattcttccagcgcacagaaacaaggacaaactacccaaatatcttcaggatctctaac
cttgtcatgtacattgtgattattattcactggaacgcctgtgtgtactactcgatctcg
aaagccattggatttggggctgacacatgggtctatcccaacacctccgatcctgaattt
gcccgtctgactagaaagtatgtctacagtctctactggtcaacactgaccctgactact
atcggtgaaacaccccctcctgtaagagattctgagtatttcttcgtggtcattgacttc
ttggttggagtattgatttttgctaccattgttggtaatgtgggctctatgatctccaac
atgaatgctgccagggccgagtttcaagcaaggattgatgctatcaagcagtatatgcac
tttcggaatgtgagtaaagacatggaaaaaagagttataaagtggtttgactacctgtgg
acaaacaaaaaggctgtggatgaaagggaagtcctgaagtatctgccagataaactaaga
gcagagattgcaatcaatgttcacctggaaacgctaaaaaaagttcggatttttgcagac
tgtgaagctggtttgttggttgaactggttttgaaactccagccgcaagtatacagtcct
ggagattatatttgcagaaaaggagacattggacgagagatgtacattatcaaagaaggc
aagctggcagtagtcgctgatgatggaattacccaatttgtggtcctaagtgatggcagc
tattttggagaaatcagcattcttaatatcaaaggtagcaaagctggcaatcgaagaaca
gccaatattagaagtattggatactcagacttgttttgtctatctaaagatgatctcatg
gaggctttaacagagtatccagatgcaaaggctatgctggaagaaaaaggcaagcaaatc
ctaatgaaggatgggctgctggacattgaagttgcaaatttaggaagtgatcctaaagat
ctggaagagaaggtcacctacatggaaagagcaatggacagattacaaacaaagtttgcc
aggttgttggctgagtatgaagctgcacaacagaaactgaaaaaaagacttacacaaatc
gagaaaatattgaagccagttatagagcaagaatttgcagacttagaagaagcagatcca
tccacagataaacctggagtgtcaaaagcggaataa
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