Gymnogyps californianus (California condor): 127016170
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Entry
127016170 CDS
T08687
Name
(RefSeq) LOW QUALITY PROTEIN: replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl03030
DNA replication
gcl03410
Base excision repair
gcl03420
Nucleotide excision repair
gcl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
127016170
03410 Base excision repair
127016170
03420 Nucleotide excision repair
127016170
03430 Mismatch repair
127016170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gcl03032
]
127016170
03400 DNA repair and recombination proteins [BR:
gcl03400
]
127016170
DNA replication proteins [BR:
gcl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
127016170
DNA repair and recombination proteins [BR:
gcl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
127016170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_14
Rad17
BRCT_2
AAA_22
AAA_5
RuvB_N
AAA_30
RNA_helicase
AAA_18
AAA_17
nSTAND3
AAA_16
TIP49
AAA_7
AAA_33
AAA_19
Motif
Other DBs
NCBI-GeneID:
127016170
NCBI-ProteinID:
XP_050752471
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All DBs
Position
4:complement(26102795..26145252)
Genome browser
AA seq
1149 aa
AA seq
DB search
MDIRKFFGVVPPGKRQECETVKKSEKIKNGEGPSSGKKREKETKVNNSPSEDDSRQKRTN
KKKRIIYDSDSEEEVRSAKKSKKPSEKKAATSKLGKVLKQDPVVYISETDEDDDFVNKRI
SLKPKENGTSAIGPTTVKKEDVKPRAKSKPLSPVKQTPTSALDYFGTSSVQRSEKKLVAS
KRKEPSQSGDSTLDDEAIARQLQFEEDSELERQLHEDEEFAKTLAVLDETPRKKKAWKDS
GGEQTVLSIKSSPNVKEXYKQLQRVKATNSTGEAKNYTVKQQTKSEHSKGSRLSPQSSDG
KIARELMDKTLPLKPSSKLVSLKQKEEIAEKERGAQSLVSKEKTSGKEEKTTPKKEKISP
KKAESVSPEDSEKKRINYQAYRSFLNREGPKALGSKEIPQGAENCLEGLTFVITGVLECI
ERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDCGQSKCEKASTLGTKVIDEDGLFDLIRT
MPGKKSKYELAAETEAKKAESRPKKTPQKAEAGKRNFSPFKREAGNKKYKSTPEKGDTVK
SVKKETAAVRKLMDFKWQTVEKKEAPKPKGSLVSEINEDGTERLLWVDKYKPVSLKAIIG
QQGEQSCANKLLRWLRNWHKNTSEDGQAKTNKTGGKDDGTGFKAALLSGPPGVGKTTTAC
LVCKELGYSYVELNASDTRSKNSLKEVVAESLNNTSIKDFCSGTSSSVSGKHVLIMDEVD
GMAGNEDRGGIQELIGLIRHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRLEQIKGA
MMSIAFKEGLKIPPPAMQEIILAANQDIRQVLHNLNMWCAKDKSLTYDEAKTDASRAKKD
IKLGPFDVVRKVFATGEEASRMSLIDKSDLFFHDYSLAPLFVQENYVHVKPAAAGGNLKK
HLVLLSRAADSICDGDIVDKQIRSKQNWNLLPTQAIYASVLPGELMRGYMSQFPVFPSWL
GKFSSTGKHDRVIQELAMHMSLRTQTCKRTVNMEYLSYLRDALVQPLKDLGADGVQEAIT
FMDSYCLMKEDIENIMEISMWGGKPSPFSKLDPKVKAAFTRAYNKEAHLTPYSLNSVKTS
KRQSGSAVTLELSEDLNVEEIQSDEDEQDTVESDAMIKQKKAKSSKLPKREKNEETTKKE
GKRKEKTRH
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atggatatccggaaattctttggcgttgtacctcctggaaagcgacaagaatgtgagact
gtgaaaaagagtgaaaaaattaaaaatggtgaaggaccctcaagtgggaagaaaagggaa
aaggagactaaggtgaataattcacccagtgaagatgattccagacaaaagcggacaaac
aagaaaaaaagaataatctacgattcagattcagaagaggaggtgcggtcagcgaaaaaa
tccaagaagccatctgagaaaaaagcagctacttcaaaacttggtaaagttctaaagcag
gatcctgttgtttatatttcagagacagatgaggatgacgactttgtcaataaaagaatt
tccctaaaaccgaaggagaatgggacgtcagcgattggaccaactacagtgaaaaaggaa
gatgtaaaaccacgagctaaaagcaaaccattatctccagtgaaacagactcccacctcg
gcacttgattactttgggacaagtagtgtccaacgatcagaaaagaaactggtagcaagt
aaaaggaaagaaccttcgcaaagcggagacagcacactagatgatgaggccattgctagg
caactgcagtttgaagaagattcagagctggagagacagctgcatgaagatgaagaattt
gctaaaactttggccgtgttggatgaaacaccgcggaagaaaaaagcttggaaagattca
ggaggagagcaaacagtattgagcatcaagagcagtcctaacgtgaaagaanaatacaag
cagttgcaaagagtgaaagcaacaaactcgacaggtgaagcaaagaattacactgtgaag
cagcaaactaaatctgaacattcaaaaggctctcgtttatccccacaatcatctgatggt
aaaatagcaagagagttgatggataagaccttgcctttgaaacctagctctaagcttgtg
tctctgaaacaaaaagaagagattgctgaaaaggaaagaggtgctcaaagtttagtatca
aaagaaaaaacttcagggaaagaagagaagacaacaccaaagaaggagaaaatatctccc
aagaaggctgagtctgtaagtcctgaggactctgaaaagaagcgaatcaattatcaagcc
taccgaagcttccttaatcgcgagggtccaaaagcgctgggttccaaagagatacctcag
ggagctgaaaactgcttggaaggcctgacattcgtaattacaggtgttctggagtgtatt
gaaagagatgaggccaagtctctgattgaacgttatggaggaaaagtaactggcaatgtc
agcaagaagacaaactatctggttatggggcgagactgtggccaatctaagtgtgaaaag
gcatcaactttagggacaaaagttattgatgaggatggcctgtttgatcttattcgaact
atgccaggcaaaaagtccaaatatgagctggcggctgaaacagaggcaaagaaagcggag
tcaagacctaaaaagacaccacagaaagctgaagctggaaaaaggaattttagcccattc
aaaagggaagctggtaataaaaaatacaagtctactcctgaaaaaggagataccgtcaaa
tctgtcaagaaagaaactgctgctgttcgaaagcttatggactttaaatggcagactgta
gagaagaaagaagcccccaaacctaaggggagcttggtttctgagattaatgaagatgga
acagagagattgctatgggtagataaatacaagcctgtatctcttaaggcaataattgga
cagcagggtgagcaaagctgtgccaataaactgctccgatggctcagaaattggcacaag
aatacctcagaagatggacaagcaaagaccaataaaactggaggcaaagatgatggtact
ggttttaaagcagcattactttctggtccacctggagttggtaaaactactacagcttgt
ttggtttgtaaggaactggggtatagctatgtggagctgaatgccagtgacactcgcagt
aagaacagcctgaaggaagtagttgctgaatcgcttaacaacaccagcatcaaagacttc
tgctctggcacatcctcatcagttagcgggaaacatgtattgatcatggatgaagtggat
ggtatggcaggcaatgaagacagaggagggattcaggagttgattggtttgattaggcac
actaagatacccatcatctgtatgtgtaatgatcgaaaccatcctaaaattcgttccttg
gtccactactgttttgatcttcgttttcagagacctcgtctagaacagattaagggtgcc
atgatgtctattgcgtttaaagaaggtttaaaaattccaccacctgctatgcaagagata
atcctggcagcaaatcaggacatcagacaggttttacataatcttaatatgtggtgtgcg
aaagataaatcattgacttacgatgaggctaaaacggatgccagcagagccaaaaaggat
ataaaactgggcccttttgatgttgtccggaaggtttttgctactggagaggaggcttct
cgtatgtctcttatagacaaatcagatcttttcttccatgattattccctagcacctctc
tttgtgcaggagaactatgtacatgtgaaaccagccgctgctggaggaaatctgaaaaag
cacttggtgcttttgagtagagcagctgatagtatatgtgatggtgatatagtggacaaa
cagattcgtagcaagcaaaactggaaccttcttccaacacaggctatttatgcaagtgtt
ctcccgggggagctgatgagaggctacatgtcccagtttcctgtctttcccagctggcta
gggaaattttcatccacaggcaaacatgatcgtgtcattcaagaactggcaatgcacatg
agtctcagaacccagacatgcaagaggacagtaaatatggagtatttgtcgtatttgcgg
gatgcgcttgtccagcccttgaaagacttgggagcagatggtgtacaagaagctataacg
ttcatggactcttactgcttgatgaaagaagatattgaaaatattatggaaataagcatg
tggggaggcaaacccagtcctttttcaaagctggatcccaaggtcaaagcagcttttaca
cgtgcctacaacaaagaggcacatctcactccatattcacttaattctgtcaagacatct
aaaaggcagtcaggatctgcggtgaccttagaactgagtgaagacttgaatgtggaagag
atccagtctgatgaggatgagcaagatactgttgaaagtgatgcaatgattaagcagaaa
aaggccaagtcttccaagctgccaaaaagagagaaaaatgaagaaacaacaaaaaaggaa
gggaaaagaaaagagaaaacaagacattaa
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