Gymnogyps californianus (California condor): 127016370
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Entry
127016370 CDS
T08687
Name
(RefSeq) E3 ubiquitin-protein ligase UBR1 isoform X1
KO
K10625
E3 ubiquitin-protein ligase UBR1 [EC:
2.3.2.27
]
Organism
gcl
Gymnogyps californianus (California condor)
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gcl04121
]
127016370
Enzymes [BR:
gcl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127016370
Ubiquitin system [BR:
gcl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
UBR box proteins
127016370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRT6_C
WHD_UBR1
zf-UBR
ClpS
STAC2_u1
Motif
Other DBs
NCBI-GeneID:
127016370
NCBI-ProteinID:
XP_050752760
LinkDB
All DBs
Position
5:complement(30675953..30741601)
Genome browser
AA seq
1702 aa
AA seq
DB search
MDPLLEKQEEMVQTAILYPLECYLFGEDPDIFLEKLQQSGTSQLCGKVFKGGETTYSCRD
CAVDPTCVLCMDCFQNSIHKNHRYKMHSSTGGGFCDCGDTEAWKAGPLCTKHEPGASGSA
KENSECQLNEEIMEHSRRVFPSVIKYIVDMLIWEEEKELPPELTISREKVDSYYCVLFND
EHHSYDHVIYSLQRALGCELGEAQLHTTAIDKEGRRAVKAGHYASCQEAKEEIKRHSENV
SQRPLHVEVLHADVMAHQKFALRLGSWLNKLMSYSSDFRQIFCQICLKEEAGSEKPCFIS
KLMLWDAKLHKGARKVLHELIFSSFFMEMEYKKLFAVEFVKYYKALQKEYISDDHDRVLS
VTALSVQMFTVPTLARHLIEEQNVITTITETLLEVLPEYLDKNDKFNFQGYSQDKLNRVY
SVIYDLRYVLVSKPTLWTDRLRERFLEGFVSFLRILTCMQGMEEIKRQIGQHIEVDPDWE
AAIAIQMQLKNILLMFQEWCACDEELLLKAYSECHKAVMRCSTNGRSREKTVFHLCGHTL
ESRPYRVSADPVSIHLPLSRTLAGLHVRLSKTGTISRLHEFVSPEEFQVELLVEYPLRCL
VLVAQVAAEMWRRNGLSLISQVFYYQDVKCREEMYDKDIIMLQIAASLMDPNQFLLLILQ
RYELADAFKKIKPTKDQDLIKQCNVLIEEMLQILIYVVGERYVPGVSNVTKEDVIMREII
HLLCIEPMAHSAITKSLPENENNETGLENVIDKVATFKKPGVSGHGVYELKDECLKEFNM
FFYHYTKTQHSKAEHTQKKRRKQENGDEALPPPPPPDFSPAFSNVVRILNCDVMMHILRT
ILQRAVELETHLWTEAMIQMVLHLLSLGLLEEKQQLQKSPEEEVTFDFYHKATRMGSSAL
NAVNVLMLLEKLKRVPQLEAQKDTVNWILQMFDTVKRLREKSSLTTVTATSGSEATKGDE
SSQDKEKAERKRKAEAARLHRQKIMAQMSALQRNFIETHKLLYENTLEAQGKEDAIMEEE
SMSSAIDYSKIVLGPKRGPSVAEKEVLTCILCQEEQEVKLESAAMVLSACVQKSTALTQN
RSRILELPGDTLDPLFMHPDLPCGTHTGSCGHVMHAACWQKYFEAMQLNFRQRLHVEQIF
DLENGEYLCPLCKSLCNTVIPIVPLQAQKINSEDAEAVAQILSLAKWLEIIIVRISGYSV
KNAKGEKQNLPAFANKGMGNSALEFHSILSFGVQSSAKYSSSIKEMLILFATTIYRVGLK
VAPNEADYRIPMMTWSTCAFTIQCIENLLETEGKPLFGSLQNRQHSGLKALVQFAAAQRT
TSPQVLIQKHLIRLLGVLLPNFKGEDTPSLLEVDMFHILVGVVLSFPSLYWEDAVDLQPS
SISSAYNHLYLFHLTTLAHITQIIVSSATESPTARSSDNSEEARSAQSFCREVCQYTSGC
FSQDIPGWLVWDCVKKGIMPYLRCAALFFHYLLGVSPPEELLQVSEEGQFKALCSYLSLP
TNLFLLFQEYWDTVNPLLQRWCADPMVLSCLKGKSIAIRYPRKRNSLIELPEDYSCLLNQ
ASQFRCPRSSDDEQKHPVLCLFCGAMLCSQNTCCQELVNGEELGACTSHALQCGAGVCMF
LKIRECRVVLIEGKTRGCLYPAPYLDEYGETDPGLKRGNPLHLCRERYRKLHLLWQQHCI
IEEIARSQETNQIFFGFNWQLL
NT seq
5109 nt
NT seq
+upstream
nt +downstream
nt
atggaccccttgctggagaaacaagaagaaatggtccagacagcaatattataccccttg
gaatgttatttgtttggggaagacccagatatattcctggagaaactacaacagagtgga
acctcccagctctgtgggaaggtgttcaaaggaggggagacaacatactcttgcagagac
tgtgcagttgatccaacgtgtgtactctgtatggactgcttccagaatagcattcacaag
aaccaccggtacaagatgcatagctccactggaggcggattttgtgactgtggggataca
gaggcatggaaggctggaccgctgtgtactaaacatgagcctggagcatcaggttctgca
aaagaaaattctgaatgtcagttgaatgaagaaattatggagcactctaggagggtgttt
ccctctgtgataaaatacattgtagatatgcttatatgggaagaagagaaggaactgcct
ccagagctcacaattagtagagagaaggtagacagctactactgtgtcctttttaatgat
gaacatcattcttacgatcatgtcatctatagcctgcaaagggcacttggctgcgaactc
ggtgaagcccagttgcatactactgccatagataaagagggtcgtagagctgttaaggca
ggacattatgcctcttgtcaggaagcaaaagaagaaatcaagaggcattctgaaaatgtt
tctcaacgaccacttcatgtggaggttctgcatgctgatgttatggctcaccagaagttt
gccttgcgccttggttcttggctgaacaaactcatgagctattcaagtgactttcgccag
atcttttgtcaaatatgtctcaaagaagaagctggatctgaaaagccatgcttcataagc
aagttgatgctatgggatgcaaaacttcataaaggggcaaggaaggttcttcatgaactt
atcttcagtagttttttcatggaaatggaatacaaaaaactttttgctgtggaatttgtg
aagtattacaaggcattgcaaaaagaatacatcagtgatgatcatgacagagttctctct
gtgacagcactctcagttcagatgttcaccgtacctactctggcccgacatcttattgaa
gagcaaaatgtaatcactaccattacagagacactcctagaagtgcttccagagtactta
gacaaaaatgacaagttcaactttcaaggttacagtcaggacaaactgaaccgggtgtat
tcagtaatatatgacctcaggtatgtcttagtcagcaagcctacattatggacagaccgg
ctgagggagcggtttttagaaggatttgtttctttcctgaggattctaacctgcatgcag
ggaatggaggagataaaaagacagattggtcagcacattgaggtggaccctgactgggaa
gcagctattgctatacagatgcagctcaagaacattcttttgatgttccaggagtggtgt
gcctgtgatgaagagctgttgctcaaggcctacagcgaatgtcataaagctgtgatgagg
tgcagcacaaatggccgctcacgggaaaagacagtgtttcacttgtgtggccatactctg
gagagcagaccgtacagagtgtctgcagatcctgtcagcatacatttaccgctgtctagg
actcttgctggtcttcatgtacgattaagcaagactggaaccatctcaagattgcatgaa
tttgtttctcctgaagaatttcaagtggagctgctagtagaatatcctttgcgatgtctt
gtcttggttgctcaggttgctgcagagatgtggagaaggaatgggctctctctgataagc
caggtattctattatcaagacgttaaatgcagagaagagatgtatgataaagacatcatc
atgctccagatagctgcatctcttatggatccaaaccagttcctcctgctgatactgcag
aggtatgagcttgctgatgctttcaaaaagatcaagcccaccaaagatcaggatttgatc
aaacaatgtaacgtgttaatagaagagatgctacagattctcatctatgttgtgggggaa
agatatgtgcctggagtgagtaatgtgacaaaagaagatgttatcatgagagaaatcatc
catctgttatgtattgaaccaatggctcacagtgcaattaccaagtccttgcctgaaaat
gagaacaatgaaactggcttggagaatgtaattgataaagtggctacatttaagaaacca
ggtgtgtctggccatggagtttatgaactgaaagatgaatgcttgaaggagttcaatatg
ttcttttatcactatactaagacccagcacagcaaggctgaacatacacaaaagaaaaga
agaaaacaagaaaacggagatgaagcgttgccaccccctcctcctccagacttcagtcct
gcattcagcaacgtggtgaggattctgaactgtgacgttatgatgcacatactacggacc
attcttcagagagcagtagaactggaaacccacttgtggactgaagctatgatccaaatg
gtgcttcatctcctttctttagggttattagaagagaagcagcagttacagaagtctcca
gaagaagaagtaacctttgatttttatcacaaagcaacacgaatgggaagctcggccttg
aatgctgtgaacgtgttaatgcttctggaaaaattgaagagagttcctcagttagaggca
cagaaggacacagtcaattggatactgcagatgtttgacacagtgaaaagattgagagaa
aaatctagtttgacaacagtaacagctacatcgggctcagaagctacaaaaggtgatgag
agcagtcaggataaagagaaagctgagcggaagagaaaggcagaagcagctaggttgcac
cgtcagaagataatggcccagatgtctgcactgcagaggaatttcattgaaacccataag
ctcctatatgaaaacacattggaggcacaggggaaagaagatgctattatggaggaagaa
agcatgtcttcagcaattgattactccaaaattgttttgggtcccaaacgaggtccctct
gttgctgagaaagaagttctgacctgtattctttgtcaggaggagcaggaagtaaagttg
gaaagcgctgccatggtattatctgcctgtgtccagaagtcaactgccttaactcagaac
aggagcagaattcttgaactcccaggggatacactagatcctctcttcatgcaccctgac
ttaccttgtgggacccacacaggaagctgtggtcatgtgatgcatgcagcctgctggcag
aagtactttgaagccatgcagctgaactttcgacaacgtctgcatgttgaacagatattt
gacttggagaatggagagtatctttgtccactttgcaaatctctgtgcaatactgtgatt
cctattgttccattgcaggctcaaaaaattaacagtgaggatgcagaggcagtagctcaa
attctgtccctggctaagtggctggagattatcatagtcaggatatcgggctacagtgtg
aaaaatgctaaaggagagaaacaaaatcttccagctttcgccaacaagggaatggggaac
tctgctttggaattccattccatccttagttttggagttcagtcctcagccaaatactca
agcagtatcaaggagatgcttattctctttgccaccaccatttatagagttgggctgaaa
gttgctccaaatgaagctgattaccggattcctatgatgacctggagcacatgtgctttt
accatccagtgtatagaaaacctcttggaaacagagggcaagcctttatttggatctcta
caaaatagacagcacagtggccttaaagcattagtgcagtttgcagctgctcagagaaca
acatcaccacaggtcctgattcagaaacatctgattcgtcttctaggagttcttctacca
aactttaaaggggaggacactccatccctcttagaagtagatatgttccacattttggtg
ggagttgtgttatcctttccatctttatactgggaggatgctgtagacttgcaaccttca
tcaattagttcagcctacaaccacctctacctcttccatctgacaacactggcacacata
acacaaatcatcgtctcttcagcaacagaatcccctactgctcgatcatctgacaacagt
gaggaggcacggtctgcacagtctttctgtagagaggtttgccagtacaccagtggttgc
tttagtcaggatattccaggctggcttgtgtgggattgtgttaaaaaaggcatcatgcct
taccttcgttgtgctgctttattttttcattatttgctgggagtttctccacctgaggaa
ctactacaagtttctgaagaagggcaattcaaggcactttgtagttacctctctctacct
accaatttgttcctgctcttccaggaatattgggacacagtaaatccactgcttcaaagg
tggtgtgctgacccgatggtgttaagttgtttgaaggggaaaagcattgcaataaggtat
cctaggaaaagaaatagtttaatagagcttcctgaagactatagctgcctcctgaaccaa
gcctctcagtttagatgcccacggtcttctgatgatgaacaaaaacatccagtattgtgt
ttattctgtggggctatgttgtgttcccagaatacttgctgtcaggaactggtgaatggg
gaggagttgggagcctgtacttctcatgctcttcaatgtggagctggagtctgtatgttt
ctcaaaatcagggaatgcagagttgtcctcattgaaggtaaaaccaggggctgcttatat
cctgctccatacttggatgaatatggagaaacagatccaggtctgaaaagaggcaatccc
ctgcacttatgtcgggagcgttaccggaagctccatctgctatggcagcaacactgcatc
atagaggagattgctaggagccaagaaacgaatcagatcttctttggattcaactggcaa
ctgctctga
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integrated database retrieval system
