Gymnogyps californianus (California condor): 127016511
Help
Entry
127016511 CDS
T08687
Name
(RefSeq) general transcription factor IIH subunit 1 isoform X1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl03022
Basal transcription factors
gcl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127016511
09124 Replication and repair
03420 Nucleotide excision repair
127016511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gcl03021
]
127016511
03400 DNA repair and recombination proteins [BR:
gcl03400
]
127016511
Transcription machinery [BR:
gcl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
127016511
DNA repair and recombination proteins [BR:
gcl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
127016511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
127016511
NCBI-ProteinID:
XP_050753003
LinkDB
All DBs
Position
5:16565555..16591692
Genome browser
AA seq
548 aa
AA seq
DB search
MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTVSHMYADIKCQKISPEGK
AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLSLNAGDNSAAPSKQDVGISAAFLADVRPQTDGC
NGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEREFWTRFFQSHYFHRDRLNTGSKD
LFAECAKLDEKGLKTMVSQGVKNPLIDLTALEDKTLDEGYGVASVASTSNASKSARESSN
AAIIKRFNHHSAMVLAAGLRKQEAQNDHYSETSSTDGNSRDSDFFQPPMKKVKLQESIEY
EDLAKNNSIKTIALNLKKSDRYYHGPTPIQSQQYATSQDIINSFHSIRQEMEAYVPKLTQ
VLSSGDATSTIAVLSPGGALMQGGTQQAINQMVPNDVQSELKHLYVAVGELLRHFWSCFP
VNTPFLEEKVVKMRSNLERFQVTKLCPFQEKIRRQYLSTNLISHIEEMLQTAYNKFHTWQ
SRRMLKKT
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcaacatcatctgaagaagtgttactgattgtaaagaaggtacgtcagaagaagcag
gatggagctctctaccttatggctgaaaggatagcatgggcacctgaaggcaaagaccga
ttcacagtcagccatatgtatgcagacataaaatgccagaaaatcagtccagaaggtaaa
gctaaaattcagcttcagctagtattgcatgcaggggacacaaccaactttcacttctct
aatgaaagcacagcagtgaaggagcgagatgcggtaaaggatcttcttcaacaactgttg
cccaagttcaaaaggaaagctaataaagaacttgaggagaagaacagaatgctgcaagaa
gatcctgttttgtttcagctctataaagaccttgttgtgagccaagtaatcagtgctgaa
gaattctgggccaaccgtttaagcctcaatgcaggggataattctgcagcacctagtaag
caggatgtgggcatctctgcagcatttctggctgatgtacggcctcaaacagatggctgc
aatggtctgaggtataatttgacttcagatatcattgagtccatatttcgaacatatcct
gcagtaaaaatgaaatatgcagaaaatgttccacataacatgaccgagagggaattctgg
acacgattttttcagtctcattatttccatcgggacaggctcaatacaggctcaaaagac
ctctttgcagaatgtgccaaactggatgaaaaagggttaaaaacaatggtgtctcaagga
gtaaaaaaccccctgatagatttaacagctttagaagataaaacattagatgaaggctat
ggtgttgcttctgtggcctctacatcaaatgcctcaaaatctgctagagaaagtagcaat
gctgccattataaaacgctttaatcatcatagtgccatggtccttgcagctggcctcagg
aaacaagaagcacaaaatgaccattacagtgagaccagcagtacggatggaaactccagg
gattcagatttctttcagccaccaatgaaaaaggtgaaactgcaggagtccattgaatat
gaagatttagcaaagaataatagcattaaaactattgcactaaacttaaagaagtctgat
aggtattatcatggtccaactccaattcaatcacagcaatatgcaaccagtcaggatata
attaattcttttcatagtattaggcaagaaatggaagcatatgtacccaaactaactcag
gttctttcaagtggtgatgctactagcactattgcagtcctgtcacctggaggagcactt
atgcagggtggaacacagcaagccataaaccagatggtgccaaatgacgttcagtctgaa
ctaaaacacttgtatgtggcagtaggggaactgctgcgacacttctggtcctgctttcct
gttaacacaccattcctagaagaaaaggttgtgaaaatgaggagcaacttggaaagattt
caggttacaaagctctgcccattccaagaaaagattcggaggcagtatttaagcacaaat
ttgataagtcatatagaagagatgctgcagacagcctacaataagttccatacgtggcag
tcccggcgtatgctgaagaagacgtga
DBGET
integrated database retrieval system
