Gymnogyps californianus (California condor): 127016600
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Entry
127016600 CDS
T08687
Name
(RefSeq) DNA damage-binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl03420
Nucleotide excision repair
gcl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127016600
09124 Replication and repair
03420 Nucleotide excision repair
127016600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gcl04121
]
127016600
03400 DNA repair and recombination proteins [BR:
gcl03400
]
127016600
Ubiquitin system [BR:
gcl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
127016600
DNA repair and recombination proteins [BR:
gcl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
127016600
TCR (transcription coupled repair) factors
Cul4-CSA complex
127016600
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
127016600
NCBI-ProteinID:
XP_050753161
LinkDB
All DBs
Position
5:1798916..1816131
Genome browser
AA seq
1140 aa
AA seq
DB search
MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
TAVMELFRPKGESKDLLFILTAKYNACILEYKQNGDSIDIITRAHGNVQDRIGRPSETGI
IGIIDPECRMIGLRLYDGLFKVIPLDRENKELKAFNIRLEELQVIDVKFLYGCQAPTICF
VYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYH
NGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDL
RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDSHRE
TDNTLVLSFVGQTRVLMLNGEEVEETELTGFVDDQQTFFCGNVAHQQLIQITSASVRLVS
QEPKALVSEWKEPNGKNISVASCNSNQVVVAVGRALYYLEIRPQELRQISCTEMEHEVAC
LDITPLGDTNGMSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSH
YLLCALGDGALFYFGLSLETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
PRKICYQEVSQCFGVLSSRIEVQDASGGTTALRPSASTQALSSSVSTSKLFSSSTAPHET
SFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEE
AEPKQGRIVVFHYSDGKLQSLAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELR
TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL
DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLSHLGEFVNVFCHGSLVMQNLGET
STPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTER
KTEPATGFIDGDLIESFLDISRPKMQEVVANLQIDDGSGMKREATVDDLIKIVEELTRIH
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgtcctataactacgtcgtgacggcgcagaagccgacggccgtgaacggctgcgtcacc
gggcacttcacctcggcggaggatttgaacctgctgatcgccaagaatacgcgactggag
atctacgtggtgacagcggaggggctgcggcccgtcaaggaggtggggatgtacggcaag
accgccgtcatggagctcttccgccccaagggggagagcaaggatttgttgttcatcctg
acagccaagtataacgcctgcatcctcgagtacaagcagaacggggacagcattgatatt
ataacccgtgcccatggcaatgtgcaggatcgcatcggccgtccctcagagaccggcata
attggcatcattgacccagagtgccggatgatcggcctgcggctctacgacggcctcttc
aaggtcattcccctggaccgggagaacaaggagttaaaggcttttaacatccgcctggaa
gagctccaagtcatcgatgtgaagtttctctacggctgtcaggctccgaccatctgcttc
gtctaccaggaccctcagggtcgccacgtcaagacgtacgaggtgtccctgcgcgagaag
gagtttaacaaaggtccttggaaacaggagaacgtagaggctgaagcctccatggtcatc
gcagtgccggagccttttggaggcgcgatcatcattgggcaggagtctatcacctaccac
aacggagataaatatttagctatagctccacctatcatcaagcaaagtacgattgtgtgc
cacaaccgcgtggatcccaatgggtcccgttacttgctgggggatatggaaggacgtctc
ttcatgctgctactggagaaggaggaacagatggacggcaccgtcaccttgaaggacctg
cgtgtggaactgctcggcgagacatccattgcagagtgcttgacctacctggacaatgga
gttgtgtttgtcggttctcggcttggggattcccagcttgtgaagctcaacgtggacagc
aacgagcagggctcctatgtagtggctatggagaccttcaccaacctcggtcccatcgtc
gacatgtgtgtggtagacctggaaagacaaggccaagggcagctggtcacgtgctcgggt
gcatttaaagagggttcgctgcggatcatccggaacggcatcgggattcacgagcacgcc
agcattgatttaccggggattaaaggcttgtggcccctgaggtcggactctcatcgtgaa
acggacaatacgttggtgctgtcctttgttggccagaccagggttcttatgttaaatgga
gaggaagtagaagagacagagctcacggggtttgtggacgatcagcagactttcttctgc
ggcaacgtggcacatcagcaattgatccagatcacctctgcctctgtgagactggttagt
caggagcccaaagccctggtgagcgagtggaaagagcccaacggaaagaacatcagcgtg
gcttcctgtaacagtaaccaggtagtggtggctgtgggacgagccctgtactacctggag
atccgaccccaggagctcaggcagatcagctgcacagaaatggagcatgaagttgcctgc
ctggacatcaccccgttgggggacactaacggcatgtccccactgtgtgcaatcgggctc
tggactgacatctctgcccgcatcctaaagctgccttcgtttgaactgctgcacaaagag
atgctgggaggagaaattatccctcgctccatcctgatgacgaccttcgagagcagccat
taccttctgtgcgccctgggggatggagctctcttctacttcgggctcagcctcgagaca
ggcttgctgagtgaccgcaagaaagtgacccttgggacccagcccaccgtcctgaggact
ttccgctctctgtccaccaccaacgtctttgcttgctctgaccgccccaccgtcatctac
agcagtaaccacaagctggtcttctccaacgtcaacctgaaggaggtgaactacatgtgt
cccctcaactcggatggttatcccgacagcttggcgttggccaataacagcaccctgaca
atcggcaccattgacgagatccagaagctgcacatccgcacggttcccctctatgaatcg
cccaggaagatctgctaccaagaggtatcgcagtgtttcggcgtgctctcaagtcgtatc
gaggtgcaggatgccagtgggggcaccactgctctcagacccagcgccagcacccaggcc
ctgtcgagcagcgtgagcaccagcaagctgttctccagcagcacagcaccgcacgagacg
tccttcggagaggaggtggaggtgcacaacctcctcatcatagatcagcacaccttcgaa
gtgcttcatgctcaccagtttctgcaaaacgaatacgccctcagcctggtctcctgcaag
cttggcaaggatccaaacacctacttcatcgtgggcaccgccatggtatatcccgaggag
gcagagcccaaacagggccgcatcgttgtcttccactactctgacgggaagctgcagagc
ctggctgagaaggaggtcaagggggccgtgtattccatggtggagttcaacgggaagctc
ttagccagcatcaacagcacggtgcgcctgtatgagtggacagcagagaaagagctgcgc
acggagtgcaaccattacaacaacatcatggcgctctacctgaagaccaagggagacttc
atccttgtgggagacctgatgcggtctgtcctcctccttgcctacaagcccatggaagga
aactttgaggagattgcccgggacttcaatccaaactggatgagtgccgtggaaatcctg
gacgacgacaacttcttgggagcagagaacgctttcaatttgtttgtgtgccagaaggac
agcgcggccacgaccgatgaggagcgccagcacttgcaggaggtggggctgtcccaccta
ggagagttcgtcaatgtcttctgtcacgggtctctggtcatgcagaacctgggtgagacg
tccacgccaacacagggctcggttctcttcggcacggtcaacggcatgattggactggtg
acctcgctgtcggagagctggtacaacctcctcctggacatgcagaacaggctgaataaa
gtcatcaagagcgtgggcaagattgagcactccttttggagatcctttcacaccgagcgc
aagacagaaccggctacgggcttcatcgatggtgacctgattgaaagcttcctggacatc
agcaggcccaagatgcaagaggtggtggcaaacttgcagattgacgacggcagcggcatg
aagagggaggccaccgtagatgacctgataaagatcgtggaggagctgacccggatccat
tag
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integrated database retrieval system
