Gymnogyps californianus (California condor): 127017098
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Entry
127017098 CDS
T08687
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl04140
Autophagy - animal
gcl04142
Lysosome biogenesis
gcl04145
Phagocytosis
gcl04148
Efferocytosis
gcl05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
127017098
04142 Lysosome biogenesis
127017098
04140 Autophagy - animal
127017098
04148 Efferocytosis
127017098
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
127017098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gcl04131
]
127017098
Membrane trafficking [BR:
gcl04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
127017098
Hops complex
127017098
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
Clathrin
zf-C3HC4_2
zf-RING_Vps41
aq_1631
zf-RING_16
zf-RING_5
Lact-deh-memb
zf-RING_11
zf-ANAPC11
zf-RING_UBOX
zf-RING_2
zf_RING_Vps8
Nup54_57_C
DUF8221
LETM1_C
STX17_N
RBSN_mid
DUF5600
zf-rbx1
DUF1664
KNOX2
Motif
Other DBs
NCBI-GeneID:
127017098
NCBI-ProteinID:
XP_050753965
LinkDB
All DBs
Position
5:28595526..28607780
Genome browser
AA seq
974 aa
AA seq
DB search
MASILDEYEDSLYRSASVQQSRASVGIPHSGYVNARLEKETPIFNKQRIDFAPPEKINSL
VVSSNQLCMSLGKDTLLRIDLGKPDEPNQVELGRKDEAKVYKMFLDHTGSHLLIALNTSE
CLYLNRSVQKVRALSRWKGHLIESVGWNKFLGSETNTGPILVGTAQGQIYEAEISVSEGG
LFSTNPDQYFRQVYTLEEESGPAPVCCLEIERGIEGKFFIIATTRKRLFQFVGKVPEGTE
QQGFSSIFAMHADHLPSFREFPANLGFSEIAFYTPKLRSNPRSFAWMMGNGVLYGTLDYS
RPDSILSDEQVWVYPSDIDITVNKPISIVLTQFHFLLLLPDRVKAVCTLNGQVVFQDLFL
EKFGLLTRMIKDPTVQQIWIHTEKVVFRYHVQRESRDVWKMYMNMNKFDLAKEYCKDRPE
CLDIVLAKEAEHCFQNKRYLDSAKCYALTQNYFEEIALKFIEAKQEEALMEFLIKKLSNL
KPSEKTQTTLLTTWLTELYLNWLGILEGDPSQRNLYLDTREKFRTFLSSPKNKECLFNNR
ASIYELLASHGDTEHMVYFAVIMQDYERVVAHHCQHDEYDEALNVLSRHRDEKLFYKFSP
VLIQHIPKKVVDAWISMGSRLDARNLIPALVNYSQSASTQQINEAIRYMEFCVYQLEETQ
QAIHNYLLSLYALCRRDSLLSYLEQAGTNPNRIHYDLKYALRLCAEHGHHHACVHIYKVM
ELYEEAVDLALQVDVDLAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMACLSSC
ALLKIEDVLPFFPDFVTIDHFKEAICNSLEDYNKHIEELKREMEEATQSAKRIREDIQEM
RNKYGSVEPQEKCAACDFPLLNRPFYLFLCGHMFHYDCLLQAVFPNLPAYKQVKLEDLQK
KLAATSQPSKSHHRPKDTDTVSLGKGQQSREQIKADIDDIVAAECVYCGELMIRSIDKPF
IDPQKYEEEMQSWL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcctccatcctggacgagtacgaagattccctgtaccgctccgcctccgtgcagcag
agccgcgccagcgtgggcatcccgcactccggatatgtgaatgcacgactggagaaggaa
acaccaatatttaacaagcaaaggattgattttgctcctccagagaaaattaacagctta
gtggtctcctctaaccagctctgtatgagccttggcaaagacacccttctcaggattgat
cttgggaagccagatgaacctaatcaggtagagctgggacgcaaagatgaagccaaagtc
tacaagatgtttttggaccacacaggctctcatctcctgattgctctgaacaccagtgaa
tgcctttacctgaacagaagtgttcagaaagtgcgagcactctcccgctggaaaggccac
ttgattgaaagtgtgggctggaacaaatttcttggttcagagaccaacactgggcccatc
ctggtggggacagcccaggggcagatctatgaggctgaaatctctgtcagcgagggaggc
ctcttcagcactaatcccgaccagtacttccgacaggtctacactctggaggaggaatca
ggacctgccccagtgtgctgcttggagattgaacgaggaatagaagggaaattttttatt
atagccaccactcgaaagagactcttccagtttgttggcaaagtccctgaagggacagag
cagcaaggcttcagctccatatttgctatgcatgctgaccatttgcccagcttccgggag
tttccagccaaccttggtttcagtgagatagccttttacaccccaaagctgcgctccaac
ccacgctcctttgcctggatgatgggaaatggtgttttatatggtacattggattatagc
cgtcctgattcaattttaagtgatgaacaggtctgggtttatccttctgatattgacata
actgtgaacaagccaatatccattgtacttacccagttccacttcctgttgctgctgcct
gatcgggtgaaggctgtatgcactctgaatgggcaggttgtttttcaagatctgttcctg
gagaagtttggcttactgacacgcatgatcaaagatcccacagtccagcagatatggatc
cacactgagaaagtagtgttccgctaccatgtccagcgggaatctagagatgtgtggaag
atgtatatgaatatgaacaaatttgatttagccaaagagtattgtaaagaccgtccagag
tgcctagatattgtgcttgcaaaagaggcagagcactgcttccaaaacaagaggtatcta
gacagtgccaaatgttatgcactgacccagaactactttgaggaaattgcccttaagttc
attgaagccaagcaagaagaggccctgatggagtttctgattaagaaactaagtaaccta
aagccttctgagaagacacagaccactctgctgaccacatggttaacggagctgtacctg
aactggctaggtatattggaaggagatccctcacagcgaaatttatatttggatacacgg
gagaagtttcgcactttcctgagcagtcctaaaaacaaagaatgtctatttaataaccgg
gcatctatttatgagctgttggcaagccatggggacacagagcacatggtctactttgca
gtcatcatgcaggactacgagcgtgtagtagctcaccactgccagcatgatgagtacgat
gaagctctaaatgtgctgtccaggcacagagacgagaagctcttctacaagttctctcca
gtcctcatccagcatattcccaagaaggtagttgatgcttggatttctatgggctctaga
ctggatgccaggaacctcattccagcccttgttaactatagccagagtgccagcacccag
cagatcaatgaagccattagatatatggagttctgtgtctatcagttggaggaaacccag
caagccattcacaactacctgttgtctctttacgctttgtgtcggcgagactcgctgcta
tcgtacctggagcaagcaggaaccaacccaaacaggatccactatgatctgaagtatgca
ttgcgcctgtgtgcagagcatgggcaccaccatgcatgtgtccatatttacaaagtgatg
gaattatatgaggaggctgtggatctcgccttacaggtggatgttgatcttgccaagtcc
tgtgcagatctccctgaagatgatgaggaactccggaagaagctctggttgaagattgct
cgccatgttgttcaggaagagaaggatgtcaagaaggcaatggcctgcctctccagctgt
gccctgctgaagattgaagacgtcttgccattctttccagactttgttactattgaccat
ttcaaggaggcaatctgtaactccctggaggactacaacaagcacattgaagagctgaaa
agggagatggaggaagccacacagagtgccaagagaatccgagaggacatccaggaaatg
agaaataagtatggctctgtggagcctcaggaaaaatgtgctgcttgtgactttccactt
ctaaaccgccctttttacctttttctttgtggtcacatgtttcactatgactgtctcctc
caagcagttttcccaaaccttcctgcctataagcaggtaaaacttgaagatcttcagaag
aagctggcagctaccagtcagccttccaagagccaccaccgtcccaaggacacagatacc
gttagcttagggaaggggcagcagagccgggaacagatcaaagctgacattgatgatatt
gtggcagccgaatgtgtgtactgtggtgagctgatgatccggtccattgacaagcctttt
attgatccccaaaagtatgaagaggagatgcaaagctggctgtag
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