Gymnogyps californianus (California condor): 127017272
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Entry
127017272 CDS
T08687
Name
(RefSeq) neuronal PAS domain-containing protein 3 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
gcl
Gymnogyps californianus (California condor)
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gcl03000
]
127017272
Transcription factors [BR:
gcl03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
127017272
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_9
PAS_4
HLH
bHLH_NPAS4
DUF7510
Motif
Other DBs
NCBI-GeneID:
127017272
NCBI-ProteinID:
XP_050754219
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Position
5:41834960..42446496
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AA seq
899 aa
AA seq
DB search
MAPTKPSFQQDPSRRERLQALRKEKSRDAARSRRGKENFEFYELAKLLPLPAAITSQLDK
ASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKGIQMWKSEVCMRKTPCEVIGAQ
RRRSPSALAIEVFESHLGSHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQVELTGSS
VFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPVESTSPSLL
TTDNTLERSFFIRMKSTLTKRGVHIKSSGYKVIHITGRLRLRVSLSHGRTVPSQIMGLVV
VAHALPPPTINEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAE
DVEGIRHSHLDLLNKGQCVTKYYRWMQKNGGYIWIQSSATIAVNAKNASEKNIIWVNYLL
SNPEYKDTPMDIAQLPHLPEKTSESSETSDSESDSKDNSGNTHEDNENSKSDEKGNQSEN
SEDPESDRKKSGNQSDNEMNCNDDGNSSSNQDSRDSDDSFENSDFENQKAPEDSFGTLGS
MQIKVERYVESESDLRLQNCESLTSDSAKDSDSAGEVNAQSSSKHQKRKKRRKKQKGGSM
IRRRLSSTSSPNGLDSALVDQPQLLSSPNSASVLKIKTEISEPINFDNDSSIWNYPPNRE
ISRNESPYSMTKPPSSEHFPSPQASSSLHVSIPDSVLTPPGTENTASRKTQFSTSSNSAL
APVSSDPLSPPLSASPRDKHPGGPTTSNSLLYTGDLEALQRLQAGNVVLPLVHRVTGTLA
ATSTAAQRVYTTGTIRYAPAEVTLAMQGNLLPNTHAVNFVDVNSPSFGLDPKTPMEMLYH
HVHRLNMSGPFGSAVSGASLTQMPAGNVFTTAEGLFSTLPFPVYSNGIHTTQTLERKED
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccaccaagccaagctttcagcaggatccttccaggcgagaacgtttacaagct
ttgaggaaggaaaagtcccgagatgctgctcgctctcgacggggaaaggagaattttgaa
ttctatgagttggcaaagttgttgccactgcctgcagccattaccagccagcttgacaag
gcatccatcatccgacttacaattagctatctgaaaatgagggactttgctaatcaaggc
gatcctccatggaacttgagaatggaaggacctccacctaatacatcagtaaaagggata
caaatgtggaaatctgaggtctgcatgagaaagacaccatgtgaagttataggtgcccag
cgcaggagaagtcccagtgcccttgccattgaagtatttgaatcacatttgggaagtcat
attttacagtccctggatggatttgtatttgcactaaatcaagaaggaaaatttttgtac
atttcagaaactgtctccatctatttaggcctgtcccaagtggaactgacaggcagcagt
gtgtttgactacgtccacccaggagaccatgtggagatggcagagcagctgggcatgaag
cttcccccggggcgaggccttctctcgcagggtacagcagaggatggagccagctcagca
tcctcatcttcccagtccgagacccctgagccagtggaatctacaagccccagtttacta
accactgacaacactctagagcgctcttttttcatccgaatgaaatctacactgaccaag
cgaggagtgcacatcaaatcatcaggatacaaggtgattcatataacaggccggttacgt
ctgagagtgtcactgtcccacggacggacagtacccagccaaatcatgggacttgttgtc
gttgctcatgctttgccacctcctacaattaatgaagtcaggattgactgccacatgttt
gtcactcgcgtgaatatggacctcaatatcatttactgtgaaaataggattagtgattac
atggatctgacccctgtagatattgtaggaaagagatgttaccacttcattcatgctgaa
gatgtggaaggcatcagacatagtcacttagacttgctgaataagggtcaatgtgtaaca
aagtattaccgctggatgcagaagaacggaggttatatctggatacagtctagtgcaacc
atagctgtcaatgccaagaatgcaagtgagaagaatatcatctgggtcaattaccttctt
agtaacccagagtacaaggacactccaatggatattgcacaacttcctcatctgccagag
aaaacctcagaatcctcagagacctctgactctgaatcagactcaaaggacaactcaggt
aacacacatgaggacaatgagaactcaaagtcagatgagaaaggaaaccagtcagaaaac
agtgaagaccctgaatccgacaggaaaaagtcaggaaatcagtcggataacgaaatgaac
tgtaatgatgatgggaacagctccagcaaccaggacagcagggacagtgatgacagcttt
gaaaactctgacttcgagaatcaaaaggcccctgaggacagttttggcactcttggctct
atgcagatcaaggtggagcgctatgttgagagtgagtcagacttgcggttgcagaactgt
gaatcactgacctcggacagtgccaaggactcagacagtgcaggggaagtaaatgcccag
tcttccagcaaacatcaaaagaggaagaagaggagaaaaaagcaaaagggaggcagcatg
atccggagaaggctgtcaagcacctcaagtccaaatggacttgactcagctttggtggac
cagccccagctgctctcgtcaccaaacagtgcctcagtgctcaaaattaaaacagaaatc
tcagaacctatcaattttgataatgatagcagtatttggaattacccacccaacagggaa
atctcaaggaatgaatcgccctacagtatgaccaagccccccagctccgagcacttccct
tccccccaagccagcagtagtttacatgtctccattccagactccgttctcaccccacca
gggactgaaaatactgccagccgtaaaactcagttcagcacctcatccaactcggccttg
gctcctgtgtcctctgaccctttgtcacccccactttcagcatctccacgggacaaacat
ccaggaggtcccacaacttccaactctttgttgtacactggggatctggaagcccttcag
aggttacaagcaggcaatgtggtgcttcctttggttcacagggtaacgggaacccttgct
gcgaccagcactgctgctcagagggtctacaccactggcactattcggtatgctccagct
gaagttactttagccatgcagggcaacctcctccccaacacccatgctgttaactttgtt
gacgttaacagccccagctttgggctggatcctaaaacaccgatggaaatgctctaccac
cacgttcaccgactcaatatgtcgggaccgtttggaagtgctgtgagcggggccagtctg
acccaaatgcctgcagggaatgtgttcacaactgccgaaggacttttttccactcttcca
tttcctgtgtacagcaatggcattcacactacacagactctggaacggaaagaggattga
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