Gymnogyps californianus (California condor): 127017487
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Entry
127017487 CDS
T08687
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127017487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gcl03021
]
127017487
03036 Chromosome and associated proteins [BR:
gcl03036
]
127017487
Transcription machinery [BR:
gcl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
127017487
Coactivators
SAGA/TFTC/STAGA complex
127017487
Chromosome and associated proteins [BR:
gcl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
127017487
STAGA complex
127017487
TFTC complex
127017487
SAGA complex
127017487
SLIK complex
127017487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_SPT8
WD_LRWD1
Beta-prop_Nup120_160
PEP5_VPS11_N
CDK5RAP3
WD40_like
RAB3GAP2_N
eIF2A
VID27
Motif
Other DBs
NCBI-GeneID:
127017487
NCBI-ProteinID:
XP_050754514
LinkDB
All DBs
Position
6:complement(14921013..14933267)
Genome browser
AA seq
787 aa
AA seq
DB search
MAALPEEPAEVAAVKPDPEAGTPPQPPAAPPAAAAAPAAPPAAAAEAEAVGSGGEAAPPK
PAAPGPAASPAALDRQTLVAVLQFLRRSNLRESEEILRREARLLGDDLGAAALSPAGAGL
LGAPGGDADSTGGEALLSRVTAAAAIAIGGSVATVASSSPGAAAVAAVPPGKAGGGVVVE
DQPDVSAVLSAYNQQGDPTLYEEYYSGLKHFIECSLDCHRAELSQLFYPLFVHMYLELVY
NQHESEAKSFFERFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRISRDS
YQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAGEAKREANKAKVF
FGLLKEPEFDVPLDDEDEEGENEEGKPKKKKPKKDSVGSKSKKQDPNAPPQNRIPLPELK
DSDKLDKVMNMKEAARRVRLGPECLPSICFYTFLNAYQGLTAVDITDDSSMIVGGFADST
VRVWSVTPKKLRSVKTAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGTSFSP
DRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWA
TDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTIRLWDVLNGNCVRIFTGHKGPIH
SLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRDGEILASGSMDN
TVRLWDAVKAFEDLETDDFTTATGHINLPENSQDLLLGTYMTKSTPVVHLHFTRRNLLLA
AGAYSSQ
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggcggcactacctgaggagccggcggaggtggcggcggtaaagccggaccctgaggcg
gggacgccgccgcagccccctgccgctcctccagccgccgccgccgctcccgctgctccc
ccggccgcggcggcggaggcggaggcggtggggagcggtggggaggcggcgccccctaag
cctgcggcaccgggcccggccgcctccccggcggcgctggaccggcagacgctcgtggcc
gtgctgcagttcctgcggcgcagcaacctccgcgagtccgaggagatcctgcgccgcgaa
gcccgcctgctcggcgatgacctcggtgccgctgctctcagccccgccggcgccgggctt
ctgggagccccgggcggcgatgcggactccaccggcggcgaggcgctgctcagccgggtc
accgccgctgccgccatcgcgataggaggcagcgtcgccactgtcgcctcttccagccct
ggagcggcggcggtcgctgccgtgccgccggggaaagctggaggcggcgttgttgtggaa
gatcagccagatgtcagtgcagtattgtctgcctacaatcaacagggggacccgacgctg
tatgaggagtactacagtggattaaaacacttcattgagtgttccctggactgtcatcga
gcggaattgtctcagctgttttatcctctttttgtgcacatgtacttggaattggtctac
aatcaacatgagagtgaagcaaagtctttttttgaaagatttcatggggatcaggagtgc
tattaccaggatgacctgcgtgtattatctagcttaaccaaaaaagaacatatgaaaggt
aacgagaccatgctggatttccgaacaagcaagtttgtcctgcgtatttcccgtgactct
taccaactcttgaagaggcatcttcaggaaaagcagaacaatcagatctggaacattgtt
caggaacatctttacattgatatctttgatggaatgcctcgcagtaaacaacagatcgat
gctatggttggaagcttggctggggaggcaaaacgagaggctaataaagcaaaggttttc
tttggcttattgaaagaaccagagtttgatgtgcctttggatgatgaagatgaagaagga
gaaaatgaggaaggaaagccaaagaagaaaaaacctaaaaaagatagtgtagggtcaaaa
agtaaaaaacaagaccctaatgctcctccccaaaacagaattcctctgcctgaactgaaa
gactctgacaagctggataaagtaatgaatatgaaggaagctgcaaggcgtgtgcgtctt
ggcccagagtgcctgccctccatctgtttctacacattccttaatgcttaccagggtctg
actgcagtggatattacagatgactctagcatgattgtaggaggctttgctgactctact
gtcagagtgtggtccgtgactccgaaaaagctacgtagtgtgaaaacagcagcagacctc
agtctcatcgacaaagaatcagacgatgtcttggagaggatcatggatgagaaaacagca
agtgagttgaagattttatatggtcacagtggacctgtctatggcaccagcttcagtcct
gataggaactatctgttgtcctgttctgaggatggcactgtcagattgtggagtctccaa
acattcacgtgtttggtgggatataaaggacacaactatccagtatgggatacacaattc
tctccttatggttattactttgtgtcagggggacacgacagagtggctcgtctgtgggca
acggatcactaccagcctttacggatatttgctggccatcttgctgatgtgacgtgtacc
cgatttcatccaaactccaactatattgccacgggctcggcagacaggactatacggctc
tgggatgttttgaatggaaattgtgtgagaatattcactggacataagggaccaattcat
tcattggcattttctcctaatggacgattcctggctactggagcaacagatggaagagtt
ctgctgtgggatattggacatggcttgatggttggagaattgaaagggcacactgacact
atctacgcgctcagattcagtagagatggggagattttagcatcaggttcaatggataac
acagttcgtctgtgggatgctgtgaaggcatttgaagatttagaaaccgatgactttact
acagccactggacatataaacttgcctgaaaactcacaggacttgttactaggtacatac
atgaccaaatcaaccccggttgtacacctccattttacacgcagaaacttgctgctggct
gcgggagcctacagttcacagtaa
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