Gymnogyps californianus (California condor): 127017504
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Entry
127017504 CDS
T08687
Name
(RefSeq) TATA-binding protein-associated factor 172 isoform X1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
gcl
Gymnogyps californianus (California condor)
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gcl03021
]
127017504
Transcription machinery [BR:
gcl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
127017504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
TOR1L1_N
Vac14_Fab1_bd
HEAT_2
TPR_Trm732_C
ARM_ECM29
Cnd1
Arm
Motif
Other DBs
NCBI-GeneID:
127017504
NCBI-ProteinID:
XP_050754539
LinkDB
All DBs
Position
6:18179688..18228675
Genome browser
AA seq
1844 aa
AA seq
DB search
MAVSRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLSKVLVYLRSTNWDTRI
AAGQAVEAIVKNVPEWNPTPRSKQEPGSESPMEDSPSTDRLRFDRFDICRLLKHGASLLG
SAGAEFEVQDDKSGEIDPKERIARQRKLLQKKLGLDMGAAIGMNTEDLFNDEDLDYSPSS
VSLVNKQPTLQAAELIDSEFRAGMSSRQKNKAKRMAKLFAKQRSRDAVEANEKSNDSTDG
EPEEKRRKVANVVINQPATDSKTLVENAPEEANEWPLESFCEEVCNDLFNPSWEVRHGAG
TGLREILKAHGKSGGKMGDSSLEEMIQQHQEWLEDLVIRLLCVFALDRFGDFVSDEVVAP
VRETCAQTLGVVLKHMNETGVHKTVDVLLKLLTQEQWEVRHGGLLGIKYALAVRQDMINT
LLPKVLPAIIEGLQDLDDDVRAVAAASLVPVVESLVQLQSQKVPFILNTLWDALLELDDL
TASTNSIMILLSSLLTYPQVRKCSIQQSLTVLVPRVWPFLHHTISSVRKAALETLFTLLS
TQDQSSSTWLTPILQDMLRHIFQFCILESNQEILDLIHKVWLELLNKASVQYVVAAACPW
MGAWLCLMMQPSHLPIDLNMLLEVKTRSKEKAGAKLRQGQTQNKEVIQEYIAGADSIAED
PATRDYVVMRARMMAAKLLGALCCCICDPGVNTVTQEIKPAESLAQLLLFHLNSKSALQR
ISVALVICEWAALQKECRTVAICVQPRLLGVLSEHLYYDEIAVPFTRMQNECKQLISLLA
DAHIDIGNRVNCSVFTIDQANELVTSVFHEVTSSFTLNPKILQQLDSKRQQVQMTVTETN
QEWQVLHLRVHTFAACAVVNLQQLPEKLNPVIKPLMEAIKKEENTLVQNYVASCIAKLLQ
QCTTRSPCPNSKIIKNLCNSLCVDPHLTPLAACPAQPQSSHENSKGPNSDKDGMHHTVTK
HRGIITLYRHQKAAFAITSRRGPTPKAPKAPIADLPAGSSGSIPTELDEAQKPYVVQRRG
AEFALSTIAKHFGAEMATGLPHLWDAMVGSLRNNIHINNFDRKSLLEKGDAPAQELVNSL
QVFETTAASMDTQLHPLLIQHLPHLYMCLQHPSTAVRHMAARCVGVMSKIATMETMNIFL
EKVLPWLGAIDDNTKQEGAIEALACVMEQLDVGIVPYIVLLVVPVLGRMSDQTNSVRFMA
TQCFATLIRLMPLEAGIPDPPNMSEELIRMKAKERHFLEQLLDGKKLENYKIPVPIKAEL
RKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCLRAQEYARTKLVDSVP
LPSLVVCPPTLTGHWVDEVGKFCSKEYLNPLHYTGPPTERARLQHQVKRHNLIVASYDVV
RNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAVKQLTANYRIILSGTPIQNNVLELWSL
FDFLMPGFLGTERQFAARYGKPILASRDARSSSREQEAGVLAMEALHRQVLPFLLRRMKE
DVLQDLPPKIIQDYYCILSPLQVQLYEDFAKSRAKCDIDETVSSISLNEETEKPKLKATG
HVFQALQYLRKLCNHPALVLTSQHPEYKRITEQLAAHNSSLRDIQHAPKLSALKQLLLDC
GLGNGGSSESGTEAVVAQHRVLIFCQLKSMLDIVEHDLLRPQLPSVTYLRLDGSIPAGQR
HSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQK
RVVNVYRLITRGTLEEKIMGLQKFKMNIANTVISQENASLQSMGTEQLLDLFTLDKDGKT
EKADTSTSSGKASMKSVLENLGELWDQEQYDTEYSLENFMHSLK
NT seq
5535 nt
NT seq
+upstream
nt +downstream
nt
atggccgtctccaggcttgatcgtctctttattttactggacaccggtacaacaccagta
acaagaaaagcagctgcacagcaacttggggaggtagtgaaactgcatcctcatgaactg
aataatctcttatctaaagtgttggtgtatttaagaagtacgaattgggatactcgtatt
gcagctggccaggctgttgaagcaatagtgaaaaatgtacctgagtggaatccaactcca
agatcaaaacaagaaccaggctcagaaagtcccatggaagactcaccttcaacagatcgg
ttgcgttttgacagatttgatatatgtcggttgttaaaacatggtgcatctcttcttgga
tctgctggcgcagaatttgaagtccaagatgataaatcaggtgaaattgatcctaaagag
aggatagcacgacagaggaaactgttacaaaagaaacttggcctagatatgggtgctgca
attgggatgaacactgaagatctgttcaatgatgaagatctggactattctccttcttca
gtttcactagtaaacaaacaacctactcttcaggctgctgagttaattgactcagaattt
cgagctggtatgagcagtagacaaaagaataaagccaaaagaatggccaagctatttgca
aagcaaagatccagagatgcagtggaagctaatgagaagagcaatgatagcactgatggg
gaaccagaagaaaagagaagaaaggttgcaaatgttgtcatcaaccagcctgccacagac
tcaaaaacattggtagaaaatgctccagaagaggcaaatgaatggcctctggaaagcttt
tgtgaagaggtgtgcaatgatctctttaacccttcttgggaggttcgacatggtgcaggt
actggactgagagagatacttaaagctcacggtaaaagtggtggtaaaatgggagatagc
tctttagaagagatgattcagcagcatcaggagtggctagaagacttggttattagactt
ctttgtgtgtttgcattagacagatttggagactttgtttcggatgaagtggtggcacca
gtacgtgagacttgtgctcagactttgggagtagtattgaaacatatgaatgagactgga
gttcataaaactgtggatgttctcctgaagctgcttacacaggaacagtgggaagtaaga
catggtggtctcctaggaataaagtacgctttggcagtacgtcaggacatgatcaacact
ttattgcctaaagtgttgcctgcaataattgaaggtctccaagatctggatgatgatgtc
cgagctgttgctgcagcatctttagtaccagtagtggaaagcctggtccaacttcagtct
cagaaggtgccttttattcttaataccttgtgggatgcacttctggagttggatgacttg
acagcttccacaaacagtatcatgatccttctttcttcccttctgacttatcctcaggtc
cgcaaatgcagtattcagcaatcactcacagttttggtcccacgtgtctggccgttcttg
catcatactatatcttctgtgcgaaaagcggcactggaaacattattcacgctgctgtct
acccaagaccagagctcttcaacgtggctgactccaattctgcaagacatgttgaggcac
atatttcaattttgtatcttagaaagcaaccaagaaattctggatcttattcacaaggta
tggctggaactgttaaacaaggcgtctgtacagtatgtggttgcagctgcttgtccatgg
atgggagcctggctctgcttaatgatgcagccatctcacttgcccattgacttaaacatg
ttgctagaagtaaaaaccagatcaaaagaaaaggcaggtgctaaactgcgtcaaggtcaa
acccagaataaggaagtgattcaggaatatattgctggggcagacagcattgcagaagat
ccagcaaccagggattacgttgtcatgcgagctcggatgatggcagcaaagttgctggga
gcactttgttgctgcatttgtgacccaggtgtaaatactgttactcaagaaataaagcca
gctgaatcattagctcagctactgctcttccacttgaattctaaatctgccttgcagagg
attagtgttgcattagtaatctgtgagtgggcagccctgcaaaaggagtgtagaactgtg
gccatttgtgtgcagcctcgtttacttggggtcctttctgaacatctctattatgatgaa
attgctgttccttttacacgaatgcagaatgaatgtaaacaactcatctcattgttagct
gatgcacacattgacattggaaacagagtaaactgcagtgtatttacaatagatcaagct
aatgagttggttacttctgttttccatgaagtgacatcatcctttactttgaatcctaaa
attctacaacagttggacagtaaacgacaacaagtccaaatgactgttacagaaacaaat
caagaatggcaagtgttgcatctgcgagtccatacatttgctgcatgtgcagttgtgaac
ttgcagcaacttccagaaaaactaaatcctgttataaaacccttaatggaagctatcaaa
aaagaggagaatacacttgtacaaaactatgtggcttcatgtatagcaaagttacttcag
cagtgtacaacaaggtctccttgtcccaactcaaagattataaaaaatctctgcaactcc
ctctgtgtggatccacatcttaccccactagcagcatgtcctgcacagcctcagagtagc
catgaaaactcaaaagggcccaactctgataaagatgggatgcatcatacagttactaag
cacaggggaataattacattgtacagacatcagaaagctgcttttgccatcacaagtcgg
cgaggtcctactccaaaagctccaaaagccccaattgcagatctccccgctggcagcagt
ggaagcattcctacagaacttgatgaggctcagaaaccttatgttgtacagagaagagga
gctgaatttgccttatctactatagctaaacattttggtgctgaaatggcaacaggattg
ccacatctctgggatgctatggttggttcattaaggaacaacattcacataaataatttt
gaccgaaagtccttactggaaaaaggagatgctcctgcccaggagctagtgaattctttg
caggtttttgaaacaacagcagcttcaatggatactcagctacaccctctgttaatacag
catttgcctcatctttacatgtgccttcaacatcccagcactgcagtgagacacatggct
gctcgttgtgtcggtgttatgagcaaaatagctaccatggaaaccatgaatatctttcta
gagaaagttctaccatggttgggagcaatagatgacaacaccaaacaagaaggtgcaatt
gaagcacttgcatgtgtaatggagcagctggacgttggcattgttccatatattgttctt
ctagtggttccagttctgggtagaatgagtgatcagacaaacagtgtccgttttatggcc
actcagtgctttgcaacactaattagactaatgcctcttgaggctggtataccagatcca
ccaaacatgtctgaagaattaatccgaatgaaagctaaagaacgtcactttctggaacaa
ttactggatggaaaaaaactggaaaactataaaattccagtaccaatcaaagcagagctc
agaaaatatcagcaggatggagtgaactggctggcatttctcaataaatacaaacttcat
ggaattctttgtgatgacatgggcttaggaaaaactttacaatccatttgtattcttgca
ggtgatcattgccttagggctcaggaatatgcaagaacaaaactggtggacagtgttcct
cttccctccttggtggtgtgccctcctacactcacaggacactgggtggatgaagtgggc
aaattttgctcaaaagaatatcttaatcctttgcactatacaggacctcctactgagaga
gcaagattacaacaccaggtgaaaagacacaatctcatagtggcttcatatgatgttgta
agaaatgacattgacttcttcagaaatattaagtttaattactgcattcttgatgaaggc
catgtaataaaaaatggaaaaacaaagctgtcaaaagcagtaaaacaactgactgccaat
tacaggataattctttctgggacaccaatccagaacaacgtcttagagttgtggtcgttg
tttgacttccttatgccaggatttttgggtactgaacgccaatttgcagctcgttatggc
aaaccaatcctggcaagtagagatgcccgaagctccagtcgagaacaagaggctggggtt
cttgcaatggaagcactgcaccgccaagttctgccgttcctgctaaggagaatgaaagag
gatgtactgcaagatcttccacccaaaattattcaagattattactgtattctcagtcct
ctacaggttcagctttatgaagattttgccaagtctcgtgccaaatgtgatattgatgaa
acagtttcttcaatttcactgaatgaagaaactgaaaaaccaaagctgaaagctacaggt
catgtatttcaggcattgcaatacttacggaagctatgcaaccatccagcattagtgtta
acaagccaacatccagaatataaaagaattacagagcaacttgcagctcataattcatcc
cttcgagatatccaacatgcacctaagctgtctgctttaaaacaactgttgctagactgt
ggtttggggaatggtggatcttcagaaagcggtacagaagctgttgtggcccagcacaga
gtacttatcttctgtcaacttaaaagcatgctggatatagtggagcatgaccttctcaga
cctcagttaccttcagttacttatttacgactagatggcagcatacctgctggtcagagg
cattccattgtttcacggtttaataatgacccatctatagatgttcttttgctcaccact
catgttggtggattgggacttaacttaacaggggctgatacagtagtatttgtggaacat
gactggaacccaatgagagacctgcaagccatggatcgggcacatcgcattgggcagaaa
cgtgttgttaatgtatatcgcctgataaccaggggaactctggaggagaagatcatgggt
cttcaaaagttcaaaatgaatattgcaaatacagtgatcagccaagaaaacgcaagccta
cagagcatgggaacagaacagcttcttgatctgttcactcttgacaaggatgggaaaact
gaaaaagcagatacctctacctcttctgggaaagcatcaatgaaatcagtactcgaaaac
cttggagaactatgggatcaagaacagtatgacactgaatacagtcttgaaaactttatg
cattcattaaagtaa
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