Gymnogyps californianus (California condor): 127017533
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Entry
127017533 CDS
T08687
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl04010
MAPK signaling pathway
gcl04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127017533
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
127017533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gcl03000
]
127017533
Transcription factors [BR:
gcl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
127017533
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank
Ank_2
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
127017533
NCBI-ProteinID:
XP_050754600
LinkDB
All DBs
Position
6:complement(22829072..22837931)
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AA seq
935 aa
AA seq
DB search
MLGLDGLLRPASSSPAGGRPRADMDEQFQPCLDGLGYDDFNFDSHMMEQKEPLMPTVEGP
YLVIIEQPKQRGFRFRYGCEGPSHGGLPGASSEKGRKTYPTVKICNYTGMARIEVDLVTH
SDPPRVHAHSLVGKQCNEAGNCIAIVGPKDMTAQFSNLGVLHVTKKNMMEIMKEKLKQQK
MRNRTHLLTEAELREIELEAKELKKVMDLSIVRLRFTAYLRDSSGNFALALQPVISDPIH
DSKSPGASNLKISRMDKTAGSVRGGDEVYLLCDKVQKDDIEVRFYEDDENGWQAFGDFSP
TDVHKQYAIVFRTPPYHKPKIDRPVTVFLQLKRKRGGDVSDSKQFTYYPVVEDKEEVERK
RKKVLPQFPQHFGGGSHMGGAGGGAGGFGSGGGGNLSFPYSPGLAYNSIYSPGPHPVGGY
QGGVQMKGPEAEGPGSDRQAPAESTYCKELQKHAQLCQLWMLALARRNAHALLDYSVTAD
PRMLLAVQRHLAGSQDENGDTPLHLAIIHEQMAVIKQLIEVIVSIPRQQIINISNNLQQT
PLHLAVITKQPQVVQLLLQARADPTLLDRYGNSLLHLALQAGDEEMLRTLLAHLGSAAPY
LLRLPNFHGLLPVHLAVKAKSLACLDLLVRKGADVNAVERQGGRTPLHLAVEMENLNMAT
HLVKKLGADVNSRTFAGNTPLHLAAGLGSPTLTKLLLKAGADVLCENDEPVSPSSSEASS
DTDADPEEQELAMELGEPAPAVEDGTNPEPSAQRHGQAGHRQRLCHTPLDLTRSQKVREI
LLQASQQGPEAELPAAPQPGKVLSLDSEALQGLEQLLNQDCSGSDWIELAKRLGLCSLVE
TYKDTPSPSISLLRSYEVTGRGQPGGLLEALDSMGLHKAVRLLHKTEALEKLQSTELKED
SAYGSESVEEEQAPTLALKPGPGGELPHSQQPQVR
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgctggggctggacgggttgctgagaccagcctcctcctccccggccggcggccggccc
cgcgcagacatggacgagcagttccagccctgcctggatgggcttggctatgacgacttc
aatttcgactcccacatgatggagcagaaggagcccctgatgccaacggtggaaggtccc
taccttgtcatcatcgagcagccaaagcagcgggggttccggtttcggtacggctgcgag
ggcccttcgcacggggggctgccaggagcatccagcgagaagggacgcaagacctatccc
accgtcaagatctgcaactacacaggtatggcccggatcgaggtggacctggtgacgcac
agcgaccctcctcgcgtgcatgcacatagcctggtgggcaagcagtgcaacgaggccggc
aactgcatcgcaattgtgggacccaaggacatgacggcccagttcagcaacctgggagtg
ctccatgtcaccaagaagaatatgatggagatcatgaaggaaaagctgaagcagcagaag
atgcgcaacaggacccatctgctgacggaagcggagctgcgtgagattgagctggaggcg
aaggagctgaagaaggtgatggacctgagcatcgtgcggttgcgcttcaccgcctacctc
cgtgacagcagcgggaacttcgcgctggccctccagcctgtcatctcagaccccatccac
gacagtaagtccccaggagcttccaacctgaagatctcacggatggataagacggcaggc
tccgtgcggggaggggacgaggtttacttgctgtgtgataaagttcagaaagatgacatc
gaggtgcgtttctacgaggatgatgagaacggctggcaggccttcggagacttctccccc
actgacgtgcacaagcagtatgccatcgtcttccgcacgcccccctaccacaagcccaag
atcgaccgtcccgtcaccgtcttcctgcagctgaagcggaagcgggggggcgacgtgagc
gactccaagcagttcacctactaccccgtggtggaagataaggaagaagtggagaggaag
cgcaagaaagtcctgcctcagtttccccagcacttcggcgggggctcgcacatggggggt
gccggtggcggggccgggggcttcggctctggaggaggcgggaacctcagcttcccctac
tcccctgggctggcctacaacagcatctactcgcctggcccccatcctgtggggggctac
caggggggtgtgcagatgaagggtcctgaggcggaggggcccgggagcgacaggcaggcg
cctgcagagagcacgtactgcaaggagctgcagaagcacgcccagctctgccaactgtgg
atgctggcactggcccgtcgcaatgcccatgccctgcttgactactcggtcaccgccgac
ccccgcatgctgctggcggtccagaggcacctggccggatcgcaggacgagaacggagac
acgcctttgcacctcgctattatccatgagcagatggctgtgatcaagcagctgatcgag
gtcattgttagcatccccagacagcagatcatcaacatctccaacaacttgcagcagacg
ccgctgcatctggcagtcatcaccaagcagcctcaagtggtccagctcctgctgcaagcc
cgtgccgaccccaccttgctggaccgctatggcaattccctgctgcacctggcgctccag
gctggtgatgaagagatgctgaggacgctgctagctcatctgggctcagctgccccttac
ctgctccgcctgcccaatttccatggcctcctgcctgtgcacttggctgtgaaggcaaag
agtttggcctgcctggacctgttggtcaggaagggagcggacgtgaacgcggtggagagg
cagggcgggaggaccccgctgcacctggccgtggagatggagaacctgaacatggccacc
cacctggtgaagaagctgggagcagatgtcaacagccggacttttgccgggaacaccccc
ctgcacctggctgctggcctgggctcccccaccctcaccaaactgctcctcaaagctggg
gcagacgtgctgtgcgagaacgacgagcctgtgagcccgtcctcgtcagaggccagcagc
gacacggacgccgaccctgaggagcaggagctggccatggagctgggggagccagccccg
gccgtggaggacggcaccaaccctgagccctccgcgcagaggcacgggcaggcagggcac
aggcagcgcctctgccacacgcccctggacctgactcggagccagaaggtgcgggagatc
ctgctgcaggcctcccagcagggccccgaggcggagctgcccgctgccccccagccaggg
aaggtcctgtcgctggacagtgaggcgctgcaggggctggagcagctgctgaaccaggac
tgcagtgggtcggactggatcgagctggccaagcgcctgggactctgcagcctggtggag
acctacaaggacaccccctcgcccagcatcagcctcctgcgcagttacgaggtcactggc
agggggcagcctggggggctgctggaggcgctggactccatggggctccacaaggccgtg
aggctgctccacaaaaccgaggcgctggagaagctgcaaagcacagagctgaaggaagac
agcgcctacggcagcgagtcggtggaggaggagcaggcacccacgctggccctgaagcca
gggccggggggtgagctgccccacagccagcagccacaggtgcgctga
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